RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 TNFAIP1Q13829 316 aa33.96■■■■□ 3.03
USP42-204ENST00000451154 TBC1D22AQ8WUA7 517 aa33.96■■■■□ 3.03
USP42-204ENST00000451154 MANSC4A6NHS7 340 aaPredicted RBP33.95■■■■□ 3.03
USP42-204ENST00000451154 IFIT1P09914 478 aaKnown RBP33.95■■■■□ 3.03
USP42-204ENST00000451154 PUM3Q15397 648 aaKnown RBP33.95■■■■□ 3.03
USP42-204ENST00000451154 UNCXA6NJT0 531 aa33.94■■■■□ 3.02
USP42-204ENST00000451154 CDAN1Q8IWY9 1227 aa33.94■■■■□ 3.02
USP42-204ENST00000451154 ZBTB48P10074 688 aaPredicted RBP33.93■■■■□ 3.02
USP42-204ENST00000451154 INHBEP58166 350 aa33.93■■■■□ 3.02
USP42-204ENST00000451154 TEPSINQ96N21 525 aa33.93■■■■□ 3.02
USP42-204ENST00000451154 TMEM39BQ9GZU3 492 aa33.93■■■■□ 3.02
USP42-204ENST00000451154 ARAP2Q8WZ64 1704 aa33.93■■■■□ 3.02
USP42-204ENST00000451154 CT47B1P0C2W7 299 aaPredicted RBP33.92■■■■□ 3.02
USP42-204ENST00000451154 UBTFL1P0CB47 393 aaPredicted RBP33.92■■■■□ 3.02
USP42-204ENST00000451154 ATG9AQ7Z3C6 839 aa33.92■■■■□ 3.02
USP42-204ENST00000451154 IFNL1Q8IU54 200 aa33.92■■■■□ 3.02
USP42-204ENST00000451154 CFHR5Q9BXR6 569 aa33.92■■■■□ 3.02
USP42-204ENST00000451154 GJA5P36382 358 aa33.91■■■■□ 3.02
USP42-204ENST00000451154 HDLBPQ00341 1268 aaKnown RBP33.91■■■■□ 3.02
USP42-204ENST00000451154 NOM1Q5C9Z4 860 aaKnown RBP33.91■■■■□ 3.02
USP42-204ENST00000451154 ANKRD13AQ8IZ07 590 aa33.91■■■■□ 3.02
USP42-204ENST00000451154 CCER2I3L3R5 266 aa33.9■■■■□ 3.02
USP42-204ENST00000451154 ALDH1A1P00352 501 aa33.9■■■■□ 3.02
USP42-204ENST00000451154 TEKT1Q969V4 418 aa33.9■■■■□ 3.02
USP42-204ENST00000451154 SIL1Q9H173 461 aa33.9■■■■□ 3.02
USP42-204ENST00000451154 KIF16BQ96L93 1317 aa33.89■■■■□ 3.02
USP42-204ENST00000451154 FKTNO75072 461 aa33.89■■■■□ 3.02
USP42-204ENST00000451154 SLC5A1P13866 664 aa33.89■■■■□ 3.02
USP42-204ENST00000451154 TNNI2P48788 182 aa33.89■■■■□ 3.02
USP42-204ENST00000451154 CACNB3P54284 484 aa33.89■■■■□ 3.02
USP42-204ENST00000451154 SOX10P56693 466 aa33.89■■■■□ 3.02
USP42-204ENST00000451154 PKN2Q16513 984 aaKnown RBP33.89■■■■□ 3.02
USP42-204ENST00000451154 LPIN2Q92539 896 aa33.89■■■■□ 3.02
USP42-204ENST00000451154 API5Q9BZZ5 524 aaKnown RBP33.89■■■■□ 3.02
USP42-204ENST00000451154 HPS5Q9UPZ3 1129 aa33.89■■■■□ 3.02
USP42-204ENST00000451154 IGF2BP3O00425 579 aaKnown RBP eCLIP33.88■■■■□ 3.01
USP42-204ENST00000451154 MRIQ9BWK5 157 aa33.88■■■■□ 3.01
USP42-204ENST00000451154 ELP3Q9H9T3 547 aa33.88■■■■□ 3.01
USP42-204ENST00000451154 TNRC18O15417 2968 aaPredicted RBP33.87■■■■□ 3.01
USP42-204ENST00000451154 ZDHHC15Q96MV8 337 aa33.86■■■■□ 3.01
USP42-204ENST00000451154 LRRFIP2Q9Y608 721 aaKnown RBP33.86■■■■□ 3.01
USP42-204ENST00000451154 RARSP54136 660 aaKnown RBP33.85■■■■□ 3.01
USP42-204ENST00000451154 APOBEC3HQ6NTF7 200 aaKnown RBP33.85■■■■□ 3.01
USP42-204ENST00000451154 SUGT1Q9Y2Z0 365 aa33.85■■■■□ 3.01
USP42-204ENST00000451154 PPP1R3FQ6ZSY5 799 aaPredicted RBP33.84■■■■□ 3.01
USP42-204ENST00000451154 OPTNQ96CV9 577 aa33.84■■■■□ 3.01
USP42-204ENST00000451154 CEP126Q9P2H0 1117 aa33.84■■■■□ 3.01
USP42-204ENST00000451154 CIAO1O76071 339 aa33.83■■■■□ 3.01
USP42-204ENST00000451154 MAP3K9P80192 1104 aa33.82■■■■□ 3
USP42-204ENST00000451154 WDR66Q8TBY9 1149 aa33.82■■■■□ 3
USP42-204ENST00000451154 CNKSR2Q8WXI2 1034 aa33.82■■■■□ 3
USP42-204ENST00000451154 PTPN18Q99952 460 aa33.82■■■■□ 3
USP42-204ENST00000451154 FBXO3Q9UK99 471 aa33.82■■■■□ 3
USP42-204ENST00000451154 PA2G4Q9UQ80 394 aaKnown RBP33.82■■■■□ 3
USP42-204ENST00000451154 OTOFQ9HC10 1997 aa33.81■■■■□ 3
USP42-204ENST00000451154 MAST3O60307 1309 aa33.81■■■■□ 3
USP42-204ENST00000451154 ATP2B3Q16720 1220 aa33.81■■■■□ 3
USP42-204ENST00000451154 OTUD7BQ6GQQ9 843 aa33.81■■■■□ 3
USP42-204ENST00000451154 HHIPL2Q6UWX4 724 aa33.81■■■■□ 3
USP42-204ENST00000451154 MEIS3Q99687 375 aa33.81■■■■□ 3
USP42-204ENST00000451154 TMOD2Q9NZR1 351 aa33.81■■■■□ 3
USP42-204ENST00000451154 HDAC5Q9UQL6 1122 aa33.81■■■■□ 3
USP42-204ENST00000451154 VGLL4Q14135 290 aa33.79■■■■□ 3
USP42-204ENST00000451154 FBXO46Q6PJ61 603 aaPredicted RBP33.79■■■■□ 3
USP42-204ENST00000451154 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.79■■■■□ 3
USP42-204ENST00000451154 MYH13Q9UKX3 1938 aa33.79■■■■□ 3
USP42-204ENST00000451154 TESPA1A2RU30 521 aaPredicted RBP33.78■■■■□ 3
USP42-204ENST00000451154 MS4A4AQ96JQ5 239 aa33.78■■■■□ 3
USP42-204ENST00000451154 LAMB1P07942 1786 aa33.77■■■■□ 3
USP42-204ENST00000451154 IL15P40933 162 aaPredicted RBP33.77■■■■□ 3
USP42-204ENST00000451154 CRHR2Q13324 411 aa33.77■■■■□ 3
USP42-204ENST00000451154 FKBP1CQ5VVH2 108 aa33.77■■■■□ 3
USP42-204ENST00000451154 FAM83AQ86UY5 434 aa33.77■■■■□ 3
USP42-204ENST00000451154 CSADQ9Y600 493 aa33.77■■■■□ 3
USP42-204ENST00000451154 INTS3Q68E01 1043 aaKnown RBP33.76■■■□□ 2.99
USP42-204ENST00000451154 ARHGAP45Q92619 1136 aa33.76■■■□□ 2.99
USP42-204ENST00000451154 GNL3LQ9NVN8 582 aaKnown RBP33.76■■■□□ 2.99
USP42-204ENST00000451154 COPRSQ9NQ92 184 aa33.75■■■□□ 2.99
USP42-204ENST00000451154 PHKA1P46020 1223 aa33.74■■■□□ 2.99
USP42-204ENST00000451154 DIXDC1Q155Q3 683 aa33.74■■■□□ 2.99
USP42-204ENST00000451154 OTUD5Q96G74 571 aa33.74■■■□□ 2.99
USP42-204ENST00000451154 TRIM17Q9Y577 477 aa33.74■■■□□ 2.99
USP42-204ENST00000451154 PRDX5P30044 214 aa33.73■■■□□ 2.99
USP42-204ENST00000451154 ADORA1P30542 326 aa33.73■■■□□ 2.99
USP42-204ENST00000451154 BRI3BPQ8WY22 251 aa33.73■■■□□ 2.99
USP42-204ENST00000451154 DAGLAQ9Y4D2 1042 aa33.73■■■□□ 2.99
USP42-204ENST00000451154 PDE4DIPQ5VU43 2346 aa33.73■■■□□ 2.99
USP42-204ENST00000451154 ZKSCAN4Q969J2 545 aaPredicted RBP33.72■■■□□ 2.99
USP42-204ENST00000451154 LDHBP07195 334 aaKnown RBP33.71■■■□□ 2.99
USP42-204ENST00000451154 GTF2A2P52657 109 aa33.71■■■□□ 2.99
USP42-204ENST00000451154 TIMM10P62072 90 aa33.71■■■□□ 2.99
USP42-204ENST00000451154 CDC42EP5Q6NZY7 148 aa33.71■■■□□ 2.99
USP42-204ENST00000451154 MIGA2Q7L4E1 593 aa33.71■■■□□ 2.99
USP42-204ENST00000451154 OTOP1Q7RTM1 612 aa33.71■■■□□ 2.99
USP42-204ENST00000451154 WRNIP1Q96S55 665 aa33.71■■■□□ 2.99
USP42-204ENST00000451154 DENND2AQ9ULE3 1009 aa33.71■■■□□ 2.99
USP42-204ENST00000451154 CCL15-CCL14A0A0B4J2E2 113 aa33.7■■■□□ 2.99
USP42-204ENST00000451154 GNAI3P08754 354 aa33.7■■■□□ 2.99
USP42-204ENST00000451154 CCL15Q16663 113 aa33.7■■■□□ 2.99
USP42-204ENST00000451154 CD99L2Q8TCZ2 262 aa33.7■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms