RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 TMEM39BQ9GZU3 492 aa17.47■□□□□ 0.39
CPSF7-207ENST00000449811 TTF2Q9UNY4 1162 aaKnown RBP17.47■□□□□ 0.39
CPSF7-207ENST00000449811 FAM205AQ6ZU69 1335 aa17.47■□□□□ 0.39
CPSF7-207ENST00000449811 RANBP2P49792 3224 aaKnown RBP17.46■□□□□ 0.39
CPSF7-207ENST00000449811 GNRH1P01148 92 aa17.46■□□□□ 0.39
CPSF7-207ENST00000449811 TNNI2P48788 182 aa17.46■□□□□ 0.39
CPSF7-207ENST00000449811 DZIP1LQ8IYY4 767 aaKnown RBP17.46■□□□□ 0.39
CPSF7-207ENST00000449811 LINS1Q8NG48 757 aa17.46■□□□□ 0.39
CPSF7-207ENST00000449811 ZCCHC17Q9NP64 241 aaKnown RBP17.46■□□□□ 0.39
CPSF7-207ENST00000449811 CHMP3Q9Y3E7 222 aa17.46■□□□□ 0.39
CPSF7-207ENST00000449811 A0A1B0GUL6 1792 aa17.45■□□□□ 0.38
CPSF7-207ENST00000449811 SPDYE5A6NIY4 337 aa17.45■□□□□ 0.38
CPSF7-207ENST00000449811 CETPP11597 493 aa17.45■□□□□ 0.38
CPSF7-207ENST00000449811 PRMT2P55345 433 aa17.45■□□□□ 0.38
CPSF7-207ENST00000449811 DNAAF4Q8WXU2 420 aa17.45■□□□□ 0.38
CPSF7-207ENST00000449811 SHISA4Q96DD7 197 aa17.45■□□□□ 0.38
CPSF7-207ENST00000449811 ZSWIM8A7E2V4 1837 aa17.44■□□□□ 0.38
CPSF7-207ENST00000449811 CEP290O15078 2479 aa17.44■□□□□ 0.38
CPSF7-207ENST00000449811 BTBD19C9JJ37 291 aa17.44■□□□□ 0.38
CPSF7-207ENST00000449811 PLIN1O60240 522 aa17.44■□□□□ 0.38
CPSF7-207ENST00000449811 FOXO4P98177 505 aa17.44■□□□□ 0.38
CPSF7-207ENST00000449811 FLIIQ13045 1269 aa17.44■□□□□ 0.38
CPSF7-207ENST00000449811 FKBP5Q13451 457 aaPredicted RBP17.44■□□□□ 0.38
CPSF7-207ENST00000449811 MTFR1Q15390 333 aa17.44■□□□□ 0.38
CPSF7-207ENST00000449811 TWISTNBQ3B726 338 aaPredicted RBP17.44■□□□□ 0.38
CPSF7-207ENST00000449811 CRKP46108 304 aa17.43■□□□□ 0.38
CPSF7-207ENST00000449811 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
CPSF7-207ENST00000449811 SNAPC2Q13487 334 aa17.43■□□□□ 0.38
CPSF7-207ENST00000449811 TDRD7Q8NHU6 1098 aaKnown RBP17.43■□□□□ 0.38
CPSF7-207ENST00000449811 NKX2-3Q8TAU0 364 aa17.43■□□□□ 0.38
CPSF7-207ENST00000449811 SNCAIPQ9Y6H5 919 aa17.43■□□□□ 0.38
CPSF7-207ENST00000449811 ARAP2Q8WZ64 1704 aa17.42■□□□□ 0.38
CPSF7-207ENST00000449811 DLL1O00548 723 aa17.42■□□□□ 0.38
CPSF7-207ENST00000449811 IRF6O14896 467 aa17.42■□□□□ 0.38
CPSF7-207ENST00000449811 ECM2O94769 699 aaPredicted RBP17.42■□□□□ 0.38
CPSF7-207ENST00000449811 TAF7LQ5H9L4 462 aa17.42■□□□□ 0.38
CPSF7-207ENST00000449811 LDHAL6AQ6ZMR3 332 aa17.42■□□□□ 0.38
CPSF7-207ENST00000449811 ERO1BQ86YB8 467 aa17.42■□□□□ 0.38
CPSF7-207ENST00000449811 ZNF594Q96JF6 807 aaPredicted RBP17.42■□□□□ 0.38
CPSF7-207ENST00000449811 CNNM1Q9NRU3 951 aa17.42■□□□□ 0.38
CPSF7-207ENST00000449811 HIBADHP31937 336 aaKnown RBP17.41■□□□□ 0.38
CPSF7-207ENST00000449811 GYG1P46976 350 aa17.41■□□□□ 0.38
CPSF7-207ENST00000449811 CCDC57Q2TAC2 916 aa17.41■□□□□ 0.38
CPSF7-207ENST00000449811 SLC17A8Q8NDX2 589 aa17.41■□□□□ 0.38
CPSF7-207ENST00000449811 WRNIP1Q96S55 665 aa17.41■□□□□ 0.38
CPSF7-207ENST00000449811 HTATIP2Q9BUP3 242 aa17.41■□□□□ 0.38
CPSF7-207ENST00000449811 SRRDQ9UH36 339 aa17.41■□□□□ 0.38
CPSF7-207ENST00000449811 PSMC4P43686 418 aa17.4■□□□□ 0.38
CPSF7-207ENST00000449811 LMBR1LQ6UX01 489 aa17.4■□□□□ 0.38
CPSF7-207ENST00000449811 C17orf99Q6UX52 265 aa17.4■□□□□ 0.38
CPSF7-207ENST00000449811 RAET1EQ8TD07 263 aa17.4■□□□□ 0.38
CPSF7-207ENST00000449811 ZKSCAN4Q969J2 545 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-207ENST00000449811 CPA4Q9UI42 421 aa17.4■□□□□ 0.38
CPSF7-207ENST00000449811 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
CPSF7-207ENST00000449811 HOXD10P28358 340 aa17.39■□□□□ 0.37
CPSF7-207ENST00000449811 CTGFP29279 349 aa17.39■□□□□ 0.37
CPSF7-207ENST00000449811 GRK4P32298 578 aa17.39■□□□□ 0.37
CPSF7-207ENST00000449811 GJA8P48165 433 aa17.39■□□□□ 0.37
CPSF7-207ENST00000449811 CACNB3P54284 484 aa17.39■□□□□ 0.37
CPSF7-207ENST00000449811 PPIL2Q13356 520 aa17.39■□□□□ 0.37
CPSF7-207ENST00000449811 UBE4AQ14139 1066 aa17.39■□□□□ 0.37
CPSF7-207ENST00000449811 UBE2Q1Q7Z7E8 422 aa17.39■□□□□ 0.37
CPSF7-207ENST00000449811 FAM84BQ96KN1 310 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-207ENST00000449811 TRIM47Q96LD4 638 aa17.39■□□□□ 0.37
CPSF7-207ENST00000449811 PRO3102Q9H379 93 aa17.39■□□□□ 0.37
CPSF7-207ENST00000449811 COL6A3P12111 3177 aa17.38■□□□□ 0.37
CPSF7-207ENST00000449811 GJB1P08034 283 aa17.38■□□□□ 0.37
CPSF7-207ENST00000449811 OSBPP22059 807 aa17.38■□□□□ 0.37
CPSF7-207ENST00000449811 EPHA10Q5JZY3 1008 aa17.38■□□□□ 0.37
CPSF7-207ENST00000449811 HOOK2Q96ED9 719 aa17.38■□□□□ 0.37
CPSF7-207ENST00000449811 TMOD2Q9NZR1 351 aa17.38■□□□□ 0.37
CPSF7-207ENST00000449811 NR2E3Q9Y5X4 410 aa17.38■□□□□ 0.37
CPSF7-207ENST00000449811 FMNL1O95466 1100 aaPredicted RBP17.37■□□□□ 0.37
CPSF7-207ENST00000449811 CCL5P13501 91 aa17.37■□□□□ 0.37
CPSF7-207ENST00000449811 HDLBPQ00341 1268 aaKnown RBP17.37■□□□□ 0.37
CPSF7-207ENST00000449811 GRIK5Q16478 980 aa17.37■□□□□ 0.37
CPSF7-207ENST00000449811 RNF208Q9H0X6 261 aa17.37■□□□□ 0.37
CPSF7-207ENST00000449811 MYPNQ86TC9 1320 aa17.37■□□□□ 0.37
CPSF7-207ENST00000449811 PPATQ06203 517 aa17.36■□□□□ 0.37
CPSF7-207ENST00000449811 CHAF1AQ13111 956 aaPredicted RBP17.36■□□□□ 0.37
CPSF7-207ENST00000449811 DCAF15Q66K64 600 aa17.36■□□□□ 0.37
CPSF7-207ENST00000449811 ANKRD23Q86SG2 305 aa17.36■□□□□ 0.37
CPSF7-207ENST00000449811 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.36■□□□□ 0.37
CPSF7-207ENST00000449811 TEKT1Q969V4 418 aa17.36■□□□□ 0.37
CPSF7-207ENST00000449811 BIN2Q9UBW5 565 aaPredicted RBP17.36■□□□□ 0.37
CPSF7-207ENST00000449811 PDHXO00330 501 aa17.35■□□□□ 0.37
CPSF7-207ENST00000449811 UBXN2AP68543 259 aa17.35■□□□□ 0.37
CPSF7-207ENST00000449811 BEND3Q5T5X7 828 aa17.35■□□□□ 0.37
CPSF7-207ENST00000449811 FAM83AQ86UY5 434 aa17.35■□□□□ 0.37
CPSF7-207ENST00000449811 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
CPSF7-207ENST00000449811 PRKRIP1Q9H875 184 aaPredicted RBP17.35■□□□□ 0.37
CPSF7-207ENST00000449811 IQSEC3Q9UPP2 1182 aaPredicted RBP17.35■□□□□ 0.37
CPSF7-207ENST00000449811 ADGRA2Q96PE1 1338 aa17.35■□□□□ 0.37
CPSF7-207ENST00000449811 LAMA3Q16787 3333 aa17.35■□□□□ 0.37
CPSF7-207ENST00000449811 F6X3S4 739 aa17.34■□□□□ 0.37
CPSF7-207ENST00000449811 GRM8O00222 908 aa17.34■□□□□ 0.37
CPSF7-207ENST00000449811 ZBTB7BO15156 539 aaPredicted RBP17.34■□□□□ 0.37
CPSF7-207ENST00000449811 FARP2O94887 1054 aaPredicted RBP17.34■□□□□ 0.37
CPSF7-207ENST00000449811 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
CPSF7-207ENST00000449811 TBC1D22AQ8WUA7 517 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms