RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 SERPINA10Q9UK55 444 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 NOD1Q9Y239 953 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 DNAJC25Q9H1X3 360 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 ARHGEF10LQ9HCE6 1279 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 PCDHB15Q9Y5E8 787 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 PTPDC1A2A3K4 754 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 NDC80O14777 642 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 CCDC117Q8IWD4 279 aaPredicted RBP15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 PUS7Q96PZ0 661 aaKnown RBP15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 KRT24Q2M2I5 525 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 CCDC63Q8NA47 563 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 FAM89AQ96GI7 184 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 CTAGE15A4D2H0 777 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 CTAGE8P0CG41 777 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 CTAGE6Q86UF2 777 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 CTAGE4Q8IX94 777 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 RAB3IL1Q8TBN0 382 aa15.79■□□□□ 0.12
RAPGEF3-205ENST00000449771 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 PARP10Q53GL7 1025 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 HARSP12081 509 aaKnown RBP15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 STX17P56962 302 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 TSPYL6Q8N831 410 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 CHMP2AO43633 222 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 XRCC6P12956 609 aaKnown RBP eCLIP15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 KCNA6P17658 529 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 DCAF17Q5H9S7 520 aaPredicted RBP15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 DHX32Q7L7V1 743 aaKnown RBP15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 HELLSQ9NRZ9 838 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 ATP2A1O14983 1001 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 AK2P54819 239 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 RUFY3Q7L099 469 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 CCDC77Q9BR77 488 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 PAXBP1Q9Y5B6 917 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 LETM2Q2VYF4 491 aa15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
RAPGEF3-205ENST00000449771 KRT83P78385 493 aa15.77■□□□□ 0.12
RAPGEF3-205ENST00000449771 TTC31Q49AM3 519 aaPredicted RBP15.77■□□□□ 0.12
RAPGEF3-205ENST00000449771 SYT1P21579 422 aa15.77■□□□□ 0.12
RAPGEF3-205ENST00000449771 PUM3Q15397 648 aaKnown RBP15.77■□□□□ 0.12
RAPGEF3-205ENST00000449771 ZFYVE9O95405 1425 aa15.77■□□□□ 0.11
RAPGEF3-205ENST00000449771 NUP160Q12769 1436 aa15.77■□□□□ 0.11
RAPGEF3-205ENST00000449771 H0YIN7 160 aa15.77■□□□□ 0.11
RAPGEF3-205ENST00000449771 PLBD2Q8NHP8 589 aa15.77■□□□□ 0.11
RAPGEF3-205ENST00000449771 SKILP12757 684 aa15.77■□□□□ 0.11
RAPGEF3-205ENST00000449771 ARMT1Q9H993 441 aa15.77■□□□□ 0.11
RAPGEF3-205ENST00000449771 FRMD4BQ9Y2L6 1034 aa15.77■□□□□ 0.11
RAPGEF3-205ENST00000449771 ZNF174Q15697 407 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 ZYXQ15942 572 aaKnown RBP15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 SV2BQ7L1I2 683 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 FCHSD1Q86WN1 690 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 KRT5P13647 590 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 MXRA7P84157 204 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 CCDC65Q8IXS2 484 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 CCDC42Q96M95 316 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 MAST3O60307 1309 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 ATP10BO94823 1461 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 BRAPQ7Z569 592 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 FAM200AQ8TCP9 573 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 GPHNQ9NQX3 736 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 KIF5AQ12840 1032 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 RAPGEF1Q13905 1077 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 DPP8Q6V1X1 898 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 FNBP1Q96RU3 617 aa15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 MAK16Q9BXY0 300 aaKnown RBP15.76■□□□□ 0.11
RAPGEF3-205ENST00000449771 CCT6AP40227 531 aaKnown RBP15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 BRDTQ58F21 947 aaPredicted RBP15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 DNAI1Q9UI46 699 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 PDE8AO60658 829 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 VAMP4O75379 141 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 BIRC3Q13489 604 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 FAM98CQ17RN3 349 aaKnown RBP15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 WDR44Q5JSH3 913 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 ZNF830Q96NB3 372 aaPredicted RBP15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 RAD50Q92878 1312 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 VWA3AA6NCI4 1184 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 RPL13P26373 211 aaKnown RBP15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 ATP6V0A2Q9Y487 856 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 A0A1B0GUL7 405 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 CCDC169A6NNP5 214 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 DDX21Q9NR30 783 aaKnown RBP eCLIP15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 IVNS1ABPQ9Y6Y0 642 aa15.75■□□□□ 0.11
RAPGEF3-205ENST00000449771 CTAGE9A4FU28 777 aa15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 PRKG1Q13976 671 aa15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 SOS1Q07889 1333 aaPredicted RBP15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 EIF2AK4Q9P2K8 1649 aaKnown RBP15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 ZMYM3Q14202 1370 aa15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 KRT86O43790 486 aa15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 ATP2C2O75185 946 aa15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 IVLP07476 585 aa15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 NSRP1Q9H0G5 558 aaKnown RBP15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 SH3TC1Q8TE82 1336 aa15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 EPB41P11171 864 aaKnown RBP15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 IQUBQ8NA54 791 aa15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 DDX23Q9BUQ8 820 aaKnown RBP15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 IGSF3O75054 1194 aa15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 MYCLP12524 364 aaPredicted RBP15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 ZNF790Q6PG37 636 aa15.74■□□□□ 0.11
RAPGEF3-205ENST00000449771 POLR3AO14802 1390 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms