RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
CCDC171-203ENST00000449575 CHGBP05060 677 aa11.99□□□□□ -0.49
CCDC171-203ENST00000449575 MX1P20591 662 aa11.99□□□□□ -0.49
CCDC171-203ENST00000449575 PI4K2BQ8TCG2 481 aa11.99□□□□□ -0.49
CCDC171-203ENST00000449575 ZNF384Q8TF68 577 aa11.99□□□□□ -0.49
CCDC171-203ENST00000449575 UQCRFS1P1P0C7P4 283 aa11.98□□□□□ -0.49
CCDC171-203ENST00000449575 PDE4CQ08493 712 aa11.98□□□□□ -0.49
CCDC171-203ENST00000449575 RBM26Q5T8P6 1007 aaKnown RBP11.98□□□□□ -0.49
CCDC171-203ENST00000449575 TRPM4Q8TD43 1214 aa11.98□□□□□ -0.49
CCDC171-203ENST00000449575 ZNF512BQ96KM6 892 aaPredicted RBP11.98□□□□□ -0.49
CCDC171-203ENST00000449575 DNAJC2Q99543 621 aaKnown RBP11.98□□□□□ -0.49
CCDC171-203ENST00000449575 PIH1D3Q9NQM4 214 aaKnown RBP11.98□□□□□ -0.49
CCDC171-203ENST00000449575 ECHDC1Q9NTX5 307 aa11.98□□□□□ -0.49
CCDC171-203ENST00000449575 SEMA3EO15041 775 aa11.98□□□□□ -0.49
CCDC171-203ENST00000449575 ATP5JP18859 108 aa11.98□□□□□ -0.49
CCDC171-203ENST00000449575 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
CCDC171-203ENST00000449575 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
CCDC171-203ENST00000449575 TTF2Q9UNY4 1162 aaKnown RBP11.98□□□□□ -0.49
CCDC171-203ENST00000449575 ECM29Q5VYK3 1845 aa11.98□□□□□ -0.49
CCDC171-203ENST00000449575 ASTN2O75129 1339 aaPredicted RBP11.97□□□□□ -0.49
CCDC171-203ENST00000449575 HIRAP54198 1017 aaPredicted RBP11.97□□□□□ -0.49
CCDC171-203ENST00000449575 PDE1AP54750 535 aa11.97□□□□□ -0.49
CCDC171-203ENST00000449575 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
CCDC171-203ENST00000449575 SLFNL1Q499Z3 407 aa11.97□□□□□ -0.49
CCDC171-203ENST00000449575 TBC1D10BQ4KMP7 808 aaPredicted RBP11.97□□□□□ -0.49
CCDC171-203ENST00000449575 CENPQQ7L2Z9 268 aaPredicted RBP11.97□□□□□ -0.49
CCDC171-203ENST00000449575 WDR66Q8TBY9 1149 aa11.97□□□□□ -0.49
CCDC171-203ENST00000449575 GPBP1L1Q9HC44 474 aaPredicted RBP11.97□□□□□ -0.49
CCDC171-203ENST00000449575 USP17L8P0C7I0 530 aa11.97□□□□□ -0.49
CCDC171-203ENST00000449575 DPF2Q92785 391 aa11.97□□□□□ -0.49
CCDC171-203ENST00000449575 TAF1DQ9H5J8 278 aaPredicted RBP11.97□□□□□ -0.49
CCDC171-203ENST00000449575 SCAF8Q9UPN6 1271 aaKnown RBP11.97□□□□□ -0.49
CCDC171-203ENST00000449575 GOLIM4O00461 696 aa11.96□□□□□ -0.49
CCDC171-203ENST00000449575 HACL1Q9UJ83 578 aa11.96□□□□□ -0.49
CCDC171-203ENST00000449575 CDK5RAP2Q96SN8 1893 aa11.96□□□□□ -0.49
CCDC171-203ENST00000449575 KIF3CO14782 793 aa11.96□□□□□ -0.5
CCDC171-203ENST00000449575 RPS12P25398 132 aaKnown RBP11.96□□□□□ -0.5
CCDC171-203ENST00000449575 EPHX2P34913 555 aa11.96□□□□□ -0.5
CCDC171-203ENST00000449575 FKBP1AP62942 108 aaKnown RBP11.96□□□□□ -0.5
CCDC171-203ENST00000449575 HAUS7Q99871 368 aa11.96□□□□□ -0.5
CCDC171-203ENST00000449575 PDS5AQ29RF7 1337 aaKnown RBP11.96□□□□□ -0.5
CCDC171-203ENST00000449575 SALL1Q9NSC2 1324 aa11.96□□□□□ -0.5
CCDC171-203ENST00000449575 VEGFAP15692 232 aaPredicted RBP11.95□□□□□ -0.5
CCDC171-203ENST00000449575 ZNF280AP59817 542 aaPredicted RBP11.95□□□□□ -0.5
CCDC171-203ENST00000449575 NBPF9Q3BBW0 867 aa11.95□□□□□ -0.5
CCDC171-203ENST00000449575 TBC1D22AQ8WUA7 517 aa11.95□□□□□ -0.5
CCDC171-203ENST00000449575 STAP2Q9UGK3 403 aa11.95□□□□□ -0.5
CCDC171-203ENST00000449575 MAST2Q6P0Q8 1798 aa11.95□□□□□ -0.5
CCDC171-203ENST00000449575 MYO3BQ8WXR4 1341 aa11.95□□□□□ -0.5
CCDC171-203ENST00000449575 ZBTB22O15209 634 aa11.95□□□□□ -0.5
CCDC171-203ENST00000449575 LDHBP07195 334 aaKnown RBP11.95□□□□□ -0.5
CCDC171-203ENST00000449575 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
CCDC171-203ENST00000449575 MECOMQ03112 1051 aa11.95□□□□□ -0.5
CCDC171-203ENST00000449575 MYOZ2Q9NPC6 264 aa11.95□□□□□ -0.5
CCDC171-203ENST00000449575 TTC41PQ6P2S7 1318 aa11.95□□□□□ -0.5
CCDC171-203ENST00000449575 EAPPQ56P03 285 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-203ENST00000449575 DLK2Q6UY11 383 aa11.94□□□□□ -0.5
CCDC171-203ENST00000449575 ADGRA1Q86SQ6 560 aa11.94□□□□□ -0.5
CCDC171-203ENST00000449575 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC171-203ENST00000449575 PRMT6Q96LA8 375 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-203ENST00000449575 PAG1Q9NWQ8 432 aa11.94□□□□□ -0.5
CCDC171-203ENST00000449575 H7C1D1 291 aa11.94□□□□□ -0.5
CCDC171-203ENST00000449575 IDH1O75874 414 aaKnown RBP11.94□□□□□ -0.5
CCDC171-203ENST00000449575 CFAP100Q494V2 611 aa11.94□□□□□ -0.5
CCDC171-203ENST00000449575 NSUN4Q96CB9 384 aaKnown RBP11.94□□□□□ -0.5
CCDC171-203ENST00000449575 ADARB2Q9NS39 739 aaKnown RBP11.94□□□□□ -0.5
CCDC171-203ENST00000449575 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
CCDC171-203ENST00000449575 LRP2BPQ9P2M1 347 aa11.94□□□□□ -0.5
CCDC171-203ENST00000449575 WNT10BO00744 389 aa11.93□□□□□ -0.5
CCDC171-203ENST00000449575 CRKP46108 304 aa11.93□□□□□ -0.5
CCDC171-203ENST00000449575 KIF4BQ2VIQ3 1234 aa11.93□□□□□ -0.5
CCDC171-203ENST00000449575 OGFOD1Q8N543 542 aa11.93□□□□□ -0.5
CCDC171-203ENST00000449575 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
CCDC171-203ENST00000449575 IQCA1LA6NCM1 817 aa11.93□□□□□ -0.5
CCDC171-203ENST00000449575 RBM5P52756 815 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC171-203ENST00000449575 GLRX3O76003 335 aaKnown RBP11.92□□□□□ -0.5
CCDC171-203ENST00000449575 RGS3P49796 1198 aa11.92□□□□□ -0.5
CCDC171-203ENST00000449575 DZIP1Q86YF9 867 aaKnown RBP11.92□□□□□ -0.5
CCDC171-203ENST00000449575 ZBED3Q96IU2 234 aaPredicted RBP11.92□□□□□ -0.5
CCDC171-203ENST00000449575 DAGLAQ9Y4D2 1042 aa11.92□□□□□ -0.5
CCDC171-203ENST00000449575 GSPT1P15170 499 aaKnown RBP11.92□□□□□ -0.5
CCDC171-203ENST00000449575 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
CCDC171-203ENST00000449575 PCNTO95613 3336 aa11.92□□□□□ -0.5
CCDC171-203ENST00000449575 CLRN2A0PK11 232 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 ERC2O15083 957 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 CACNB3P54284 484 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 FMR1Q06787 632 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC171-203ENST00000449575 APOBEC3HQ6NTF7 200 aaKnown RBP11.91□□□□□ -0.5
CCDC171-203ENST00000449575 ZGPATQ8N5A5 531 aaKnown RBP11.91□□□□□ -0.5
CCDC171-203ENST00000449575 MAGEB6Q8N7X4 407 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 TDRD3Q9H7E2 651 aaKnown RBP11.91□□□□□ -0.5
CCDC171-203ENST00000449575 HDAC9Q9UKV0 1011 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 DLGAP5Q15398 846 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 TEKT1Q969V4 418 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 SERPINA10Q9UK55 444 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 SUGT1Q9Y2Z0 365 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
CCDC171-203ENST00000449575 SLC9C2Q5TAH2 1124 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms