RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 MYO1CO00159 1063 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 IVLP07476 585 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 EVA1CP58658 441 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 DPF2Q92785 391 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 PHF8Q9UPP1 1060 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 MYO1BO43795 1136 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 YEATS4O95619 227 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 CCZ1BP86790 482 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 CCZ1P86791 482 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-204ENST00000449510 IQCB1Q15051 598 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 KRT40Q6A162 431 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 NAA16Q6N069 864 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-204ENST00000449510 ATRIPQ8WXE1 791 aa14.13□□□□□ -0.15
UBE3B-204ENST00000449510 RRP15Q9Y3B9 282 aaKnown RBP14.13□□□□□ -0.15
UBE3B-204ENST00000449510 TRIM21P19474 475 aaKnown RBP14.12□□□□□ -0.15
UBE3B-204ENST00000449510 HLTFQ14527 1009 aaKnown RBP eCLIP14.12□□□□□ -0.15
UBE3B-204ENST00000449510 TAX1BP1Q86VP1 789 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 IQSEC2Q5JU85 1478 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 A0A1B0GUL7 405 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 EFCAB8A8MWE9 144 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 ZPR1O75312 459 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 TXLNAP40222 546 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 NBPF11Q86T75 865 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 CEP57Q86XR8 500 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 ANKRD24Q8TF21 1146 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 CCDC47Q96A33 483 aaKnown RBP14.12□□□□□ -0.15
UBE3B-204ENST00000449510 A0A0G2JLW4 131 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 RNF113AO15541 343 aaKnown RBP14.12□□□□□ -0.15
UBE3B-204ENST00000449510 GPR161Q8N6U8 529 aaKnown RBP14.12□□□□□ -0.15
UBE3B-204ENST00000449510 KBTBD3Q8NAB2 608 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 WDR24Q96S15 920 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 MPHOSPH8Q99549 860 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 SERTAD1Q9UHV2 236 aa14.12□□□□□ -0.15
UBE3B-204ENST00000449510 EDC4Q6P2E9 1401 aaKnown RBP14.12□□□□□ -0.15
UBE3B-204ENST00000449510 IFIT5Q13325 482 aaKnown RBP14.11□□□□□ -0.15
UBE3B-204ENST00000449510 MAP9Q49MG5 647 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-204ENST00000449510 CEP112Q8N8E3 955 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 SUGCTQ9HAC7 445 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 POLD4Q9HCU8 107 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 PRR36Q9H6K5 1346 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 SOWAHDA6NJG2 315 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 HSPD1P10809 573 aaKnown RBP14.11□□□□□ -0.15
UBE3B-204ENST00000449510 CASP1P29466 404 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 SPECC1LQ69YQ0 1117 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 PI16Q6UXB8 463 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 DHX40Q8IX18 779 aaKnown RBP14.11□□□□□ -0.15
UBE3B-204ENST00000449510 CDC5LQ99459 802 aaKnown RBP14.11□□□□□ -0.15
UBE3B-204ENST00000449510 BLZF1Q9H2G9 400 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 EBAG9O00559 213 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 UBXN1Q04323 297 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 TDRD12Q587J7 1177 aaKnown RBP14.11□□□□□ -0.15
UBE3B-204ENST00000449510 MIGA1Q8NAN2 632 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 GIMAP7Q8NHV1 300 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 SAMSN1Q9NSI8 373 aaKnown RBP14.11□□□□□ -0.15
UBE3B-204ENST00000449510 TAB2Q9NYJ8 693 aa14.11□□□□□ -0.15
UBE3B-204ENST00000449510 PFKFB2O60825 505 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 MTF1Q14872 753 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 SPA17Q15506 151 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 ZNF174Q15697 407 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 CCDC96Q2M329 555 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 CCDC122Q5T0U0 273 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 TICAM2Q86XR7 235 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 NUTM2AQ8IVF1 878 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-204ENST00000449510 KRI1Q8N9T8 703 aaKnown RBP14.1□□□□□ -0.15
UBE3B-204ENST00000449510 IFT81Q8WYA0 676 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 VWA3AA6NCI4 1184 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 BTBD18B2RXH4 712 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 KRT9P35527 623 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 ARID5AQ03989 594 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 GCKRQ14397 625 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 LINC00301Q8NCQ3 95 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 NACAP1Q9BZK3 213 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 CLTCL1P53675 1640 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 EPHA10Q5JZY3 1008 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 TOGARAM2Q6ZUX3 1019 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 MAATS1Q7Z4T9 603 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 DDX21Q9NR30 783 aaKnown RBP eCLIP14.1□□□□□ -0.15
UBE3B-204ENST00000449510 TRPM2O94759 1503 aa14.1□□□□□ -0.15
UBE3B-204ENST00000449510 PSDA5PKW4 1024 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-204ENST00000449510 MTIF2P46199 727 aaKnown RBP14.09□□□□□ -0.15
UBE3B-204ENST00000449510 DIS3L2Q8IYB7 885 aaKnown RBP14.09□□□□□ -0.15
UBE3B-204ENST00000449510 CABLES1Q8TDN4 633 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 ASXL2Q76L83 1435 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 GOLGA6L10A6NI86 522 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 TOM1L2Q6ZVM7 507 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 BRAPQ7Z569 592 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 FBXO18Q8NFZ0 1043 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 FAM89AQ96GI7 184 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 TRIM47Q96LD4 638 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 LLPHQ9BRT6 129 aaKnown RBP14.09□□□□□ -0.15
UBE3B-204ENST00000449510 LRRC7Q96NW7 1537 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 FOXN1O15353 648 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 EPS15P42566 896 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 CCDC113Q9H0I3 377 aa14.09□□□□□ -0.15
UBE3B-204ENST00000449510 RNMTO43148 476 aaKnown RBP14.08□□□□□ -0.15
UBE3B-204ENST00000449510 POLA2Q14181 598 aa14.08□□□□□ -0.15
UBE3B-204ENST00000449510 AMOTQ4VCS5 1084 aa14.08□□□□□ -0.15
UBE3B-204ENST00000449510 LRRC24Q50LG9 513 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms