RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 IBSPP21815 317 aaPredicted RBP8.17□□□□□ -1.1
BEST1-202ENST00000449131 CLSTN2Q9H4D0 955 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 BCL2L12Q9HB09 334 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 ZNF219Q9P2Y4 722 aaPredicted RBP8.17□□□□□ -1.1
BEST1-202ENST00000449131 ATL3Q6DD88 541 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 SYT10Q6XYQ8 523 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 TPCN1Q9ULQ1 816 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 JAG2Q9Y219 1238 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 FRMPD1Q5SYB0 1578 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 ATP7BP35670 1465 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 ERLIN2O94905 339 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 TSPY3P0CV98 308 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 TSPY8P0CW00 308 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 GNAT2P19087 354 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 RFC4P35249 363 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 SLF2Q8IX21 1173 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 PYM1Q9BRP8 204 aaKnown RBP8.17□□□□□ -1.1
BEST1-202ENST00000449131 TMOD2Q9NZR1 351 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 MTMR6Q9Y217 621 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 CFAP74Q9C0B2 1584 aa8.17□□□□□ -1.1
BEST1-202ENST00000449131 MAP3K4Q9Y6R4 1608 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 USO1O60763 962 aaKnown RBP8.16□□□□□ -1.1
BEST1-202ENST00000449131 LARGE1O95461 756 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 FGFR1OPO95684 399 aaKnown RBP8.16□□□□□ -1.1
BEST1-202ENST00000449131 STAT6P42226 847 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 ZAP70P43403 619 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 AMPD3Q01432 767 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 SSH2Q76I76 1423 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 BTG4Q9NY30 223 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 BMS1Q14692 1282 aaKnown RBP8.16□□□□□ -1.1
BEST1-202ENST00000449131 ANO1Q5XXA6 986 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 HEATR3Q7Z4Q2 680 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 ARMT1Q9H993 441 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 ZSWIM6Q9HCJ5 1215 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 ANGEL1Q9UNK9 670 aaKnown RBP8.16□□□□□ -1.1
BEST1-202ENST00000449131 SLU7O95391 586 aaKnown RBP8.16□□□□□ -1.1
BEST1-202ENST00000449131 CCDC40Q4G0X9 1142 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
BEST1-202ENST00000449131 MYRIPQ8NFW9 859 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 MYL10Q9BUA6 226 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 LSG1Q9H089 658 aaKnown RBP8.16□□□□□ -1.1
BEST1-202ENST00000449131 CABP5Q9NP86 173 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 MCM9Q9NXL9 1143 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 ZDHHC9Q9Y397 364 aa8.16□□□□□ -1.1
BEST1-202ENST00000449131 PRAMEF22A3QJZ6 481 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 E7EWF7 191 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 RGL2O15211 777 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 TRIM21P19474 475 aaKnown RBP8.15□□□□□ -1.1
BEST1-202ENST00000449131 PAFAH1B1P43034 410 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 SPECC1Q5M775 1068 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 TAF3Q5VWG9 929 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 TTLL7Q6ZT98 887 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 TTC6Q86TZ1 520 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 SH3TC1Q8TE82 1336 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 KDRP35968 1356 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 NR1I2O75469 434 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 TAF5LO75529 589 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 PHKG2P15735 406 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 CCDC178Q5BJE1 867 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 FTOQ9C0B1 505 aaKnown RBP eCLIP8.15□□□□□ -1.1
BEST1-202ENST00000449131 USP6P35125 1406 aa8.15□□□□□ -1.1
BEST1-202ENST00000449131 PPP1R12BO60237 982 aaPredicted RBP8.15□□□□□ -1.11
BEST1-202ENST00000449131 ZNF75DP51815 510 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 SMARCC1Q92922 1105 aaPredicted RBP8.15□□□□□ -1.11
BEST1-202ENST00000449131 PHKBQ93100 1093 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.15□□□□□ -1.11
BEST1-202ENST00000449131 RMND1Q9NWS8 449 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 PHACTR2O75167 634 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 PRDM1O75626 825 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 GNAQP50148 359 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 MYL5Q02045 173 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 SPAG1Q07617 926 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 MCM6Q14566 821 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 KARSQ15046 597 aaKnown RBP8.15□□□□□ -1.11
BEST1-202ENST00000449131 MAP9Q49MG5 647 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 TCERG1LQ5VWI1 586 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 SMAP1Q8IYB5 467 aaPredicted RBP8.15□□□□□ -1.11
BEST1-202ENST00000449131 TMEM87BQ96K49 555 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 SLC24A3Q9HC58 644 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 EXOC1Q9NV70 894 aa8.15□□□□□ -1.11
BEST1-202ENST00000449131 TLR7Q9NYK1 1049 aaKnown RBP8.15□□□□□ -1.11
BEST1-202ENST00000449131 ELP1O95163 1332 aa8.14□□□□□ -1.11
BEST1-202ENST00000449131 F8W031 263 aaPredicted RBP8.14□□□□□ -1.11
BEST1-202ENST00000449131 AKR1B10O60218 316 aa8.14□□□□□ -1.11
BEST1-202ENST00000449131 PDE8AO60658 829 aa8.14□□□□□ -1.11
BEST1-202ENST00000449131 MCM7P33993 719 aa8.14□□□□□ -1.11
BEST1-202ENST00000449131 KRT2P35908 639 aa8.14□□□□□ -1.11
BEST1-202ENST00000449131 NAA30Q147X3 362 aaPredicted RBP8.14□□□□□ -1.11
BEST1-202ENST00000449131 TRMT1LQ7Z2T5 733 aaKnown RBP8.14□□□□□ -1.11
BEST1-202ENST00000449131 CTAGE1Q96RT6 745 aa8.14□□□□□ -1.11
BEST1-202ENST00000449131 PRM3Q9NNZ6 103 aa8.14□□□□□ -1.11
BEST1-202ENST00000449131 ZNF500O60304 480 aaPredicted RBP8.14□□□□□ -1.11
BEST1-202ENST00000449131 MATR3P43243 847 aaKnown RBP eCLIP8.14□□□□□ -1.11
BEST1-202ENST00000449131 NAPAP54920 295 aa8.14□□□□□ -1.11
BEST1-202ENST00000449131 PPARDQ03181 441 aa8.14□□□□□ -1.11
BEST1-202ENST00000449131 PUM3Q15397 648 aaKnown RBP8.14□□□□□ -1.11
BEST1-202ENST00000449131 ELF2Q15723 593 aa8.14□□□□□ -1.11
BEST1-202ENST00000449131 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.14□□□□□ -1.11
BEST1-202ENST00000449131 RGS12O14924 1447 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms