RNA–Protein interactions for RNA: ENST00000448901.1

LINC01247-201, Transcript of long intergenic non-protein coding RNA 1247, humanhuman

TSL 1 (best) BASIC

Gene LINC01247, Length 4,209 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01247-201ENST00000448901 ODR4Q5SWX8 454 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 C6orf118Q5T5N4 469 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 HDGFL2Q7Z4V5 671 aaPredicted RBP4.78□□□□□ -1.64
LINC01247-201ENST00000448901 SRLQ86TD4 932 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 MYLK4Q86YV6 388 aaPredicted RBP4.78□□□□□ -1.64
LINC01247-201ENST00000448901 AKT1S1Q96B36 256 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 SH3KBP1Q96B97 665 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 CDC5LQ99459 802 aaKnown RBP4.78□□□□□ -1.64
LINC01247-201ENST00000448901 CHMP5Q9NZZ3 219 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 ZKSCAN5Q9Y2L8 839 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 KIF3AQ9Y496 699 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 PRC1O43663 620 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 HTATSF1O43719 755 aaKnown RBP4.78□□□□□ -1.64
LINC01247-201ENST00000448901 PRMT3O60678 531 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 TGFB2P61812 414 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 VPS53Q5VIR6 699 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 TSHZ3Q63HK5 1081 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 NFXL1Q6ZNB6 911 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 OGFOD1Q8N543 542 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 HELQQ8TDG4 1101 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 RBSNQ9H1K0 784 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 MCM8Q9UJA3 840 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 MAP3K1Q13233 1512 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 USP17L3A6NCW0 530 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 USP17L4A6NCW7 530 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 SPTLC2O15270 562 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 SGSM2O43147 1006 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 KCNA2P16389 499 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 MSNP26038 577 aaKnown RBP4.78□□□□□ -1.64
LINC01247-201ENST00000448901 VPS72Q15906 364 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 AGAP9Q5VTM2 703 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 USP17L2Q6R6M4 530 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 USP17L1Q7RTZ2 530 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 ZNF713Q8N859 430 aaPredicted RBP4.78□□□□□ -1.64
LINC01247-201ENST00000448901 RTFDC1Q9BY42 306 aaPredicted RBP4.78□□□□□ -1.64
LINC01247-201ENST00000448901 ZNF69Q9UC07 566 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 EXOC6BQ9Y2D4 811 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 PPP2R3BQ9Y5P8 575 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 FHOD1Q9Y613 1164 aa4.78□□□□□ -1.64
LINC01247-201ENST00000448901 SHTN1A0MZ66 631 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 FGFR4P22455 802 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 CDC25CP30307 473 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 CTHP32929 405 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 HSD17B7P56937 341 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 POLR2FP61218 127 aaKnown RBP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 SYCP1Q15431 976 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 CCDC92Q53HC0 331 aaPredicted RBP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 RTL10Q7L3V2 364 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 SLC15A3Q8IY34 581 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 HPS4Q9NQG7 708 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 EVLQ9UI08 416 aaPredicted RBP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 ATP10AO60312 1499 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L15C9J2P7 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L10C9JJH3 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L13C9JLJ4 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L12C9JPN9 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L11C9JVI0 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L21D6R901 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L18D6R9N7 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L22D6RA61 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L17D6RBQ6 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L19D6RCP7 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L20D6RJB6 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 ALDH2P05091 517 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 MYL1P05976 194 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 MCM4P33991 863 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP17L24Q0WX57 530 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 RELL1Q8IUW5 271 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 ATRIPQ8WXE1 791 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 RBM33Q96EV2 1170 aaKnown RBP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 C1orf74Q96LT6 269 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 MTRQ99707 1265 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 WNK3Q9BYP7 1800 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 LUZP4Q9P127 313 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 ANKIB1Q9P2G1 1089 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 MIA2Q96PC5 1412 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 HMGB1P1B2RPK0 211 aaPredicted RBP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 H0YHG0 523 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 XRCC5P13010 732 aaKnown RBP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 USP11P51784 963 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 SARNPP82979 210 aaKnown RBP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 POU5F1BQ06416 359 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 SEPT2Q15019 361 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 PABPC1LQ4VXU2 614 aaKnown RBP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 MYO1HQ8N1T3 1032 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 LILRB2Q8N423 598 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 ERCC4Q92889 916 aaPredicted RBP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 TBC1D31Q96DN5 1066 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 HAUS7Q99871 368 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 TSPYL1Q9H0U9 437 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 TCEAL9Q9UHQ7 104 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 SYNJ1O43426 1573 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 SPATA31E1Q6ZUB1 1445 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 SPTLC1O15269 473 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 MCM2P49736 904 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 RCAN1P53805 252 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 ICA1Q05084 483 aa4.77□□□□□ -1.65
LINC01247-201ENST00000448901 CCAR1Q8IX12 1150 aaKnown RBP4.77□□□□□ -1.65
LINC01247-201ENST00000448901 TRMT2AQ8IZ69 625 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms