RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SPTY2D1Q68D10 685 aaPredicted RBP17.16■□□□□ 0.34
GTF3C3-206ENST00000448539 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
GTF3C3-206ENST00000448539 TEKT1Q969V4 418 aa17.16■□□□□ 0.34
GTF3C3-206ENST00000448539 RWDD1Q9H446 243 aaPredicted RBP17.16■□□□□ 0.34
GTF3C3-206ENST00000448539 HMG20BQ9P0W2 317 aa17.16■□□□□ 0.34
GTF3C3-206ENST00000448539 COL1A1P02452 1464 aaPredicted RBP17.16■□□□□ 0.34
GTF3C3-206ENST00000448539 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
GTF3C3-206ENST00000448539 ZNF646O15015 1829 aaPredicted RBP17.15■□□□□ 0.34
GTF3C3-206ENST00000448539 ITGBL1O95965 494 aaPredicted RBP17.15■□□□□ 0.34
GTF3C3-206ENST00000448539 MCAMP43121 646 aa17.15■□□□□ 0.34
GTF3C3-206ENST00000448539 HDLBPQ00341 1268 aaKnown RBP17.15■□□□□ 0.34
GTF3C3-206ENST00000448539 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
GTF3C3-206ENST00000448539 KRT26Q7Z3Y9 468 aa17.15■□□□□ 0.34
GTF3C3-206ENST00000448539 MTMR14Q8NCE2 650 aa17.15■□□□□ 0.34
GTF3C3-206ENST00000448539 ZNF512BQ96KM6 892 aaPredicted RBP17.15■□□□□ 0.34
GTF3C3-206ENST00000448539 CREBZFQ9NS37 354 aa17.15■□□□□ 0.34
GTF3C3-206ENST00000448539 SMARCA5O60264 1052 aaPredicted RBP17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 CENPBP07199 599 aaPredicted RBP17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 PRDX5P30044 214 aa17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 GRIK5Q16478 980 aa17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 GCC1Q96CN9 775 aa17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 GLIS2Q9BZE0 524 aaPredicted RBP17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 SNRKQ9NRH2 765 aa17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 ASTN2O75129 1339 aaPredicted RBP17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 PITPNM2Q9BZ72 1349 aa17.14■□□□□ 0.33
GTF3C3-206ENST00000448539 SPDYE2BA6NHP3 402 aa17.13■□□□□ 0.33
GTF3C3-206ENST00000448539 SPDYE6P0CI01 402 aa17.13■□□□□ 0.33
GTF3C3-206ENST00000448539 PI16Q6UXB8 463 aa17.13■□□□□ 0.33
GTF3C3-206ENST00000448539 SLF2Q8IX21 1173 aa17.13■□□□□ 0.33
GTF3C3-206ENST00000448539 MRIQ9BWK5 157 aa17.13■□□□□ 0.33
GTF3C3-206ENST00000448539 MYH13Q9UKX3 1938 aa17.12■□□□□ 0.33
GTF3C3-206ENST00000448539 TRAF5O00463 557 aa17.12■□□□□ 0.33
GTF3C3-206ENST00000448539 HHIPL2Q6UWX4 724 aa17.12■□□□□ 0.33
GTF3C3-206ENST00000448539 APOBEC3FQ8IUX4 373 aaKnown RBP17.12■□□□□ 0.33
GTF3C3-206ENST00000448539 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
GTF3C3-206ENST00000448539 PRMT6Q96LA8 375 aaPredicted RBP17.12■□□□□ 0.33
GTF3C3-206ENST00000448539 LRP2BPQ9P2M1 347 aa17.12■□□□□ 0.33
GTF3C3-206ENST00000448539 MKRN1Q9UHC7 482 aaKnown RBP17.12■□□□□ 0.33
GTF3C3-206ENST00000448539 ADM5C9JUS6 153 aa17.11■□□□□ 0.33
GTF3C3-206ENST00000448539 ZAP70P43403 619 aa17.11■□□□□ 0.33
GTF3C3-206ENST00000448539 TBC1D9Q6ZT07 1266 aa17.11■□□□□ 0.33
GTF3C3-206ENST00000448539 GPATCH3Q96I76 525 aa17.11■□□□□ 0.33
GTF3C3-206ENST00000448539 ZDHHC15Q96MV8 337 aa17.11■□□□□ 0.33
GTF3C3-206ENST00000448539 ZNF408Q9H9D4 720 aa17.11■□□□□ 0.33
GTF3C3-206ENST00000448539 VEZTQ9HBM0 779 aa17.11■□□□□ 0.33
GTF3C3-206ENST00000448539 RAI14Q9P0K7 980 aa17.11■□□□□ 0.33
GTF3C3-206ENST00000448539 PCDHAC2Q9Y5I4 1007 aa17.11■□□□□ 0.33
GTF3C3-206ENST00000448539 CLRN2A0PK11 232 aa17.1■□□□□ 0.33
GTF3C3-206ENST00000448539 TMEM88BA6NKF7 163 aa17.1■□□□□ 0.33
GTF3C3-206ENST00000448539 GSTO1P78417 241 aa17.1■□□□□ 0.33
GTF3C3-206ENST00000448539 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
GTF3C3-206ENST00000448539 TDRD3Q9H7E2 651 aaKnown RBP17.1■□□□□ 0.33
GTF3C3-206ENST00000448539 TMOD2Q9NZR1 351 aa17.1■□□□□ 0.33
GTF3C3-206ENST00000448539 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
GTF3C3-206ENST00000448539 LDHCP07864 332 aa17.09■□□□□ 0.33
GTF3C3-206ENST00000448539 HSPA1AP0DMV8 641 aaKnown RBP17.09■□□□□ 0.33
GTF3C3-206ENST00000448539 HSPA1BP0DMV9 641 aaKnown RBP17.09■□□□□ 0.33
GTF3C3-206ENST00000448539 DIXDC1Q155Q3 683 aa17.09■□□□□ 0.33
GTF3C3-206ENST00000448539 COL13A1Q5TAT6 717 aaPredicted RBP17.09■□□□□ 0.33
GTF3C3-206ENST00000448539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.09■□□□□ 0.33
GTF3C3-206ENST00000448539 ZNF70Q9UC06 446 aaPredicted RBP17.09■□□□□ 0.33
GTF3C3-206ENST00000448539 CNTNAP1P78357 1384 aa17.08■□□□□ 0.32
GTF3C3-206ENST00000448539 CYP2E1P05181 493 aaPredicted RBP17.08■□□□□ 0.32
GTF3C3-206ENST00000448539 MECOMQ03112 1051 aa17.08■□□□□ 0.32
GTF3C3-206ENST00000448539 FMR1Q06787 632 aaKnown RBP eCLIP17.08■□□□□ 0.32
GTF3C3-206ENST00000448539 TNFAIP1Q13829 316 aa17.08■□□□□ 0.32
GTF3C3-206ENST00000448539 TTF1Q15361 905 aaPredicted RBP17.08■□□□□ 0.32
GTF3C3-206ENST00000448539 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
GTF3C3-206ENST00000448539 DNAJC2Q99543 621 aaKnown RBP17.08■□□□□ 0.32
GTF3C3-206ENST00000448539 SCAF8Q9UPN6 1271 aaKnown RBP17.08■□□□□ 0.32
GTF3C3-206ENST00000448539 DAGLAQ9Y4D2 1042 aa17.08■□□□□ 0.32
GTF3C3-206ENST00000448539 IGSF3O75054 1194 aa17.07■□□□□ 0.32
GTF3C3-206ENST00000448539 ATP5JP18859 108 aa17.07■□□□□ 0.32
GTF3C3-206ENST00000448539 TNNI2P48788 182 aa17.07■□□□□ 0.32
GTF3C3-206ENST00000448539 CDCA5Q96FF9 252 aa17.07■□□□□ 0.32
GTF3C3-206ENST00000448539 ECHDC1Q9NTX5 307 aa17.07■□□□□ 0.32
GTF3C3-206ENST00000448539 IDH1O75874 414 aaKnown RBP17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 IGHDP01880 384 aa17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 NF2P35240 595 aa17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 NAA16Q6N069 864 aaPredicted RBP17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 APOBEC3HQ6NTF7 200 aaKnown RBP17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 DLK2Q6UY11 383 aa17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 NSUN4Q96CB9 384 aaKnown RBP17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 NOL10Q9BSC4 688 aaKnown RBP17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 DEFB129Q9H1M3 183 aa17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 BOLA2Q9H3K6 86 aa17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 PIH1D3Q9NQM4 214 aaKnown RBP17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 ABT1Q9ULW3 272 aaKnown RBP17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 PPP2R3BQ9Y5P8 575 aa17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 NDUFB9Q9Y6M9 179 aa17.06■□□□□ 0.32
GTF3C3-206ENST00000448539 MROH7-TTC4A0A0A0MT08 1334 aa17.05■□□□□ 0.32
GTF3C3-206ENST00000448539 AOX1Q06278 1338 aa17.05■□□□□ 0.32
GTF3C3-206ENST00000448539 TCP10L2B9ZVM9 353 aa17.05■□□□□ 0.32
GTF3C3-206ENST00000448539 NEFLP07196 543 aa17.05■□□□□ 0.32
GTF3C3-206ENST00000448539 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
GTF3C3-206ENST00000448539 CST9Q5W186 159 aa17.05■□□□□ 0.32
GTF3C3-206ENST00000448539 C2orf69Q8N8R5 385 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms