RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 XAGE3Q8WTP9 111 aa8.95□□□□□ -0.98
TRIM4-204ENST00000447480 DNAAF4Q8WXU2 420 aa8.95□□□□□ -0.98
TRIM4-204ENST00000447480 CHMP4CQ96CF2 233 aa8.95□□□□□ -0.98
TRIM4-204ENST00000447480 LRCH3Q96II8 777 aa8.95□□□□□ -0.98
TRIM4-204ENST00000447480 MTFR1LQ9H019 292 aa8.95□□□□□ -0.98
TRIM4-204ENST00000447480 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.95□□□□□ -0.98
TRIM4-204ENST00000447480 CALCOCO1Q9P1Z2 691 aa8.95□□□□□ -0.98
TRIM4-204ENST00000447480 DDX41Q9UJV9 622 aaKnown RBP8.95□□□□□ -0.98
TRIM4-204ENST00000447480 ADGRG1Q9Y653 693 aa8.95□□□□□ -0.98
TRIM4-204ENST00000447480 AFDNP55196 1824 aaKnown RBP8.95□□□□□ -0.98
TRIM4-204ENST00000447480 TUBGCP6Q96RT7 1819 aa8.95□□□□□ -0.98
TRIM4-204ENST00000447480 CARMIL3Q8ND23 1372 aa8.95□□□□□ -0.98
TRIM4-204ENST00000447480 ATP8B1O43520 1251 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 GTF2E1P29083 439 aaPredicted RBP8.94□□□□□ -0.98
TRIM4-204ENST00000447480 ST5P78524 1137 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 ATP8B2P98198 1209 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 AIMP1Q12904 312 aaKnown RBP8.94□□□□□ -0.98
TRIM4-204ENST00000447480 HSP90AB4PQ58FF6 505 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 TPTE2Q6XPS3 522 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 SAMD7Q7Z3H4 446 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 TICAM2Q86XR7 235 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 CCDC191Q8NCU4 936 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 LINS1Q8NG48 757 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 RUFY2Q8WXA3 655 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 NECTIN2Q92692 538 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 KCNB2Q92953 911 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 LRRCC1Q9C099 1032 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 SCAND2PQ9GZW5 306 aaPredicted RBP8.94□□□□□ -0.98
TRIM4-204ENST00000447480 DDX19AQ9NUU7 478 aaKnown RBP8.94□□□□□ -0.98
TRIM4-204ENST00000447480 FAM53CQ9NYF3 392 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 PARP3Q9Y6F1 533 aa8.94□□□□□ -0.98
TRIM4-204ENST00000447480 CTAGE5O15320 804 aa8.93□□□□□ -0.98
TRIM4-204ENST00000447480 STX6O43752 255 aa8.93□□□□□ -0.98
TRIM4-204ENST00000447480 KCNJ6P48051 423 aa8.93□□□□□ -0.98
TRIM4-204ENST00000447480 TCIRG1Q13488 830 aa8.93□□□□□ -0.98
TRIM4-204ENST00000447480 KRT24Q2M2I5 525 aa8.93□□□□□ -0.98
TRIM4-204ENST00000447480 NBPF10Q6P3W6 841 aaKnown RBP8.93□□□□□ -0.98
TRIM4-204ENST00000447480 RBM43Q6ZSC3 357 aaKnown RBP8.93□□□□□ -0.98
TRIM4-204ENST00000447480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRIM4-204ENST00000447480 NBPF15Q8N660 670 aa8.93□□□□□ -0.98
TRIM4-204ENST00000447480 RNF214Q8ND24 703 aa8.93□□□□□ -0.98
TRIM4-204ENST00000447480 METTL22Q9BUU2 404 aaPredicted RBP8.93□□□□□ -0.98
TRIM4-204ENST00000447480 CWC25Q9NXE8 425 aaPredicted RBP8.93□□□□□ -0.98
TRIM4-204ENST00000447480 CTNNA3Q9UI47 895 aa8.93□□□□□ -0.98
TRIM4-204ENST00000447480 PNPLA7Q6ZV29 1317 aa8.93□□□□□ -0.98
TRIM4-204ENST00000447480 PRAMEF22A3QJZ6 481 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 PI4KAP2A4QPH2 592 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 F13A1P00488 732 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 TPM1P09493 284 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 ANKRD1Q15327 319 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 ZNF827Q17R98 1081 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 VPS53Q5VIR6 699 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 ATL3Q6DD88 541 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 SARM1Q6SZW1 724 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 KRT222Q8N1A0 295 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 PI4KAP1Q8N8J0 262 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 CCDC112Q8NEF3 446 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 SPON1Q9HCB6 807 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 NSFL1CQ9UNZ2 370 aaKnown RBP8.92□□□□□ -0.98
TRIM4-204ENST00000447480 SMC3Q9UQE7 1217 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 NIP7Q9Y221 180 aaKnown RBP eCLIP8.92□□□□□ -0.98
TRIM4-204ENST00000447480 MAP3K2Q9Y2U5 619 aa8.92□□□□□ -0.98
TRIM4-204ENST00000447480 CASZ1Q86V15 1759 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 HIP1O00291 1037 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 CCP110O43303 1012 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 CAMTA2O94983 1202 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 CBX1P83916 185 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 MAP3K11Q16584 847 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 USPL1Q5W0Q7 1092 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 NBPF5PQ86XG9 351 aaPredicted RBP8.91□□□□□ -0.98
TRIM4-204ENST00000447480 RGS22Q8NE09 1264 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 ZNF397Q8NF99 534 aaPredicted RBP8.91□□□□□ -0.98
TRIM4-204ENST00000447480 TDRD7Q8NHU6 1098 aaKnown RBP8.91□□□□□ -0.98
TRIM4-204ENST00000447480 RBM46Q8TBY0 533 aaKnown RBP8.91□□□□□ -0.98
TRIM4-204ENST00000447480 ERO1AQ96HE7 468 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 TTC14Q96N46 770 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 DNAJC2Q99543 621 aaKnown RBP8.91□□□□□ -0.98
TRIM4-204ENST00000447480 UTP14AQ9BVJ6 771 aaKnown RBP8.91□□□□□ -0.98
TRIM4-204ENST00000447480 TMX4Q9H1E5 349 aaPredicted RBP8.91□□□□□ -0.98
TRIM4-204ENST00000447480 ZBTB3Q9H5J0 574 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 WBP1LQ9NX94 342 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 C9orf78Q9NZ63 289 aaPredicted RBP8.91□□□□□ -0.98
TRIM4-204ENST00000447480 TBC1D2BQ9UPU7 963 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 HPS5Q9UPZ3 1129 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 MYH3P11055 1940 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 COL24A1Q17RW2 1714 aa8.91□□□□□ -0.98
TRIM4-204ENST00000447480 RIC1Q4ADV7 1423 aa8.9□□□□□ -0.98
TRIM4-204ENST00000447480 SH3TC1Q8TE82 1336 aa8.9□□□□□ -0.98
TRIM4-204ENST00000447480 RAD50Q92878 1312 aa8.9□□□□□ -0.98
TRIM4-204ENST00000447480 GYS1P13807 737 aa8.9□□□□□ -0.98
TRIM4-204ENST00000447480 SYT1P21579 422 aa8.9□□□□□ -0.98
TRIM4-204ENST00000447480 PDE6BP35913 854 aa8.9□□□□□ -0.98
TRIM4-204ENST00000447480 KCNQ4P56696 695 aa8.9□□□□□ -0.98
TRIM4-204ENST00000447480 TUBB4BP68371 445 aa8.9□□□□□ -0.98
TRIM4-204ENST00000447480 KRT85P78386 507 aa8.9□□□□□ -0.98
TRIM4-204ENST00000447480 BMS1Q14692 1282 aaKnown RBP8.9□□□□□ -0.98
TRIM4-204ENST00000447480 R3HDM1Q15032 1099 aaKnown RBP8.9□□□□□ -0.98
TRIM4-204ENST00000447480 ATP2B3Q16720 1220 aa8.9□□□□□ -0.98
TRIM4-204ENST00000447480 SWT1Q5T5J6 900 aaKnown RBP8.9□□□□□ -0.98
TRIM4-204ENST00000447480 SLC4A10Q6U841 1118 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms