RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 NPC1L1Q9UHC9 1359 aa4.6□□□□□ -1.67
PMS1-215ENST00000447232 TM4SF4P48230 202 aa4.6□□□□□ -1.67
PMS1-215ENST00000447232 GMPSP49915 693 aaPredicted RBP4.6□□□□□ -1.67
PMS1-215ENST00000447232 TUSC1Q2TAM9 212 aa4.6□□□□□ -1.67
PMS1-215ENST00000447232 A0A087WZG4 1122 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 CAPN5O15484 640 aaPredicted RBP4.59□□□□□ -1.67
PMS1-215ENST00000447232 LILRB3O75022 631 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 WFS1O76024 890 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 CXCL9Q07325 125 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 CC2D2BQ6DHV5 1058 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 LARGE2Q8N3Y3 721 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 PTPN22Q9Y2R2 807 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 TRIM17Q9Y577 477 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 EMILIN1Q9Y6C2 1016 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 KRT26Q7Z3Y9 468 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 NIM1KQ8IY84 436 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 DEFB123Q8N688 67 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 FAM122AQ96E09 287 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 ZNF333Q96JL9 665 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 SETDB2Q96T68 719 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 GGNBP2Q9H3C7 697 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 MTMR10Q9NXD2 777 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 WASHC2AQ641Q2 1341 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 KDM3BQ7LBC6 1761 aa4.59□□□□□ -1.67
PMS1-215ENST00000447232 RAB3GAP2Q9H2M9 1393 aa4.59□□□□□ -1.68
PMS1-215ENST00000447232 ZNF609O15014 1411 aa4.59□□□□□ -1.68
PMS1-215ENST00000447232 BMP1P13497 986 aa4.59□□□□□ -1.68
PMS1-215ENST00000447232 ALDH1B1P30837 517 aa4.59□□□□□ -1.68
PMS1-215ENST00000447232 TRIM46Q7Z4K8 759 aa4.59□□□□□ -1.68
PMS1-215ENST00000447232 FOXJ1Q92949 421 aa4.59□□□□□ -1.68
PMS1-215ENST00000447232 KIFC2Q96AC6 838 aa4.59□□□□□ -1.68
PMS1-215ENST00000447232 SNX27Q96L92 541 aa4.59□□□□□ -1.68
PMS1-215ENST00000447232 UBR2Q8IWV8 1755 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 ST20-MTHFSA0A0A6YYL1 179 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 SHTN1A0MZ66 631 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 ADM5C9JUS6 153 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 CAMTA2O94983 1202 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 CANXP27824 592 aaKnown RBP4.58□□□□□ -1.68
PMS1-215ENST00000447232 MTHFSP49914 203 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 RTL5Q5HYW3 569 aaPredicted RBP4.58□□□□□ -1.68
PMS1-215ENST00000447232 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 Q7L0L9 218 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 KIF20BQ96Q89 1820 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 CACNA1AO00555 2505 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 ROCK2O75116 1388 aaKnown RBP4.58□□□□□ -1.68
PMS1-215ENST00000447232 TERTO14746 1132 aaKnown RBP4.58□□□□□ -1.68
PMS1-215ENST00000447232 C4orf48Q5BLP8 95 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 ZNF530Q6P9A1 599 aaPredicted RBP4.58□□□□□ -1.68
PMS1-215ENST00000447232 CDK15Q96Q40 435 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 VPS33BQ9H267 617 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 CNOT7Q9UIV1 285 aaKnown RBP4.58□□□□□ -1.68
PMS1-215ENST00000447232 ZNRF3Q9ULT6 936 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 TBC1D2BQ9UPU7 963 aa4.58□□□□□ -1.68
PMS1-215ENST00000447232 EYSQ5T1H1 3165 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 RBAK-RBAKDNI3L0D1 243 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 NPHP1O15259 732 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 FKBP1BP68106 108 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 NNTQ13423 1086 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 CRY2Q49AN0 593 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 TSC1Q92574 1164 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 KLF16Q9BXK1 252 aaPredicted RBP4.57□□□□□ -1.68
PMS1-215ENST00000447232 SYNGAP1Q96PV0 1343 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 ZBTB7BO15156 539 aaPredicted RBP4.57□□□□□ -1.68
PMS1-215ENST00000447232 EGFRP00533 1210 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 AMOTQ4VCS5 1084 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 PLEKHO1Q53GL0 409 aaPredicted RBP4.57□□□□□ -1.68
PMS1-215ENST00000447232 UBE2Q1Q7Z7E8 422 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 SLC51AQ86UW1 340 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 NBPF5PQ86XG9 351 aaPredicted RBP4.57□□□□□ -1.68
PMS1-215ENST00000447232 FAM174AQ8TBP5 190 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 DPF3Q92784 378 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 POLR3EQ9NVU0 708 aa4.57□□□□□ -1.68
PMS1-215ENST00000447232 PRUNE2Q8WUY3 3088 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 WTIPA6NIX2 430 aaPredicted RBP4.56□□□□□ -1.68
PMS1-215ENST00000447232 PPIP5K2O43314 1243 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 CLK2P49760 499 aaKnown RBP4.56□□□□□ -1.68
PMS1-215ENST00000447232 CAP1Q01518 475 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 AOC3Q16853 763 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 CDCA5Q96FF9 252 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 BCL2L13Q9BXK5 485 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 RSPH6AQ9H0K4 717 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 LAMB1P07942 1786 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 LAMA2P24043 3122 aaKnown RBP4.56□□□□□ -1.68
PMS1-215ENST00000447232 RIC1Q4ADV7 1423 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 H7C1D1 291 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 ADH1CP00326 375 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 HOXA10P31260 410 aaPredicted RBP4.56□□□□□ -1.68
PMS1-215ENST00000447232 IL6STP40189 918 aaPredicted RBP4.56□□□□□ -1.68
PMS1-215ENST00000447232 GRM5P41594 1212 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 SREBF2Q12772 1141 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 SLC39A6Q13433 755 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 DPF2Q92785 391 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 DCPSQ96C86 337 aaKnown RBP4.56□□□□□ -1.68
PMS1-215ENST00000447232 SHISA4Q96DD7 197 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 ZFP42Q96MM3 310 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 SLC52A2Q9HAB3 445 aa4.56□□□□□ -1.68
PMS1-215ENST00000447232 PIEZO1Q92508 2521 aa4.55□□□□□ -1.68
PMS1-215ENST00000447232 ZNF646O15015 1829 aaPredicted RBP4.55□□□□□ -1.68
PMS1-215ENST00000447232 WIPF1O43516 503 aa4.55□□□□□ -1.68
PMS1-215ENST00000447232 TIMP2P16035 220 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms