RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 RAB11FIP4Q86YS3 637 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 IFNL3Q8IZI9 196 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 CNBD1Q8NA66 436 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 INCENPQ9NQS7 918 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 TMEM63CQ9P1W3 806 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 SLC4A4Q9Y6R1 1079 aa11.23□□□□□ -0.61
COL6A4P1-201ENST00000446690 TBC1D10CQ8IV04 446 aa11.22□□□□□ -0.61
COL6A4P1-201ENST00000446690 MB21D2Q8IYB1 491 aaPredicted RBP11.22□□□□□ -0.61
COL6A4P1-201ENST00000446690 LCORLQ8N3X6 602 aa11.22□□□□□ -0.61
COL6A4P1-201ENST00000446690 AGXT2Q9BYV1 514 aa11.22□□□□□ -0.61
COL6A4P1-201ENST00000446690 NBPF3Q9H094 633 aa11.22□□□□□ -0.61
COL6A4P1-201ENST00000446690 AKAP11Q9UKA4 1901 aa11.22□□□□□ -0.61
COL6A4P1-201ENST00000446690 PTPDC1A2A3K4 754 aa11.21□□□□□ -0.61
COL6A4P1-201ENST00000446690 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.61
COL6A4P1-201ENST00000446690 TM4SF1P30408 202 aa11.21□□□□□ -0.61
COL6A4P1-201ENST00000446690 TDO2P48775 406 aa11.21□□□□□ -0.61
COL6A4P1-201ENST00000446690 CTDSPL2Q05D32 466 aa11.21□□□□□ -0.61
COL6A4P1-201ENST00000446690 ZNF274Q96GC6 653 aaPredicted RBP11.21□□□□□ -0.61
COL6A4P1-201ENST00000446690 ANKRD2Q9GZV1 360 aa11.21□□□□□ -0.61
COL6A4P1-201ENST00000446690 ANKIB1Q9P2G1 1089 aa11.21□□□□□ -0.61
COL6A4P1-201ENST00000446690 KLF18A0A0U1RQI7 1052 aa11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 SYCE3A1L190 88 aa11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 B4E1Z4 1266 aa11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 CTDNEP1O95476 244 aa11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 ANTXR2P58335 489 aa11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 LLPHQ9BRT6 129 aaKnown RBP11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 ISY1Q9ULR0 285 aaKnown RBP11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 JAG2Q9Y219 1238 aa11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 ZNF804BA4D1E1 1349 aa11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 CARMIL3Q8ND23 1372 aa11.21□□□□□ -0.62
COL6A4P1-201ENST00000446690 EP400Q96L91 3159 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 GSG1L2A8MUP6 293 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 HIBADHP31937 336 aaKnown RBP11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 CHAF1AQ13111 956 aaPredicted RBP11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 CYB5R4Q7L1T6 521 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 ADGRA1Q86SQ6 560 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 NKX2-3Q8TAU0 364 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 NACAP1Q9BZK3 213 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 EPB41L4AQ9HCS5 686 aaPredicted RBP11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 TOMM22Q9NS69 142 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 TFIP11Q9UBB9 837 aaKnown RBP11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 SCN7AQ01118 1682 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 TAF1P21675 1872 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 MAGEB6P1A0A0J9YX57 407 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 GOLGA8BA8MQT2 603 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 ADRA2BP18089 450 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 ZNF445P59923 1031 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 KRT85P78386 507 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 CSPP1Q1MSJ5 1256 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 RRP12Q5JTH9 1297 aaKnown RBP11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 SLC27A3Q5K4L6 730 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 SLC51AQ86UW1 340 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 SMARCC2Q8TAQ2 1214 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 C4BP0C0L5 1744 aa11.2□□□□□ -0.62
COL6A4P1-201ENST00000446690 GYS1P13807 737 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 GNAT2P19087 354 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 UBE2HP62256 183 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 HMGN5P82970 282 aaKnown RBP11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 FBXO33Q7Z6M2 555 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 TMEM87AQ8NBN3 555 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 SDR42E1Q8WUS8 393 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 RPGRQ92834 1020 aaKnown RBP11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 SYAP1Q96A49 352 aaPredicted RBP11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 LAMB2P55268 1798 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 SERPINB2P05120 415 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 NEDD4P46934 1319 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 GUCY1B3Q02153 619 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 ALX1Q15699 326 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 PRR5LQ6MZQ0 368 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 NAA16Q6N069 864 aaPredicted RBP11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 NFXL1Q6ZNB6 911 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 TXNRD3Q86VQ6 643 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 KIF3AQ9Y496 699 aa11.19□□□□□ -0.62
COL6A4P1-201ENST00000446690 MINDY4BA8MYZ0 360 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 CPLX1O14810 134 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 DYNLL1P63167 89 aaKnown RBP11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 ST5P78524 1137 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 GRAPQ13588 217 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 TXNRD1Q16881 649 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 MFSD6Q6ZSS7 791 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 FBXL16Q8N461 479 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 GRAPLQ8TC17 118 aaPredicted RBP11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 PNPLA7Q6ZV29 1317 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 DHX16O60231 1041 aaKnown RBP11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 KDM4AO75164 1064 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 RXRAP19793 462 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 CCDC144CPQ8IYA2 1237 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 ZSWIM5Q9P217 1185 aa11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 ANGEL1Q9UNK9 670 aaKnown RBP11.18□□□□□ -0.62
COL6A4P1-201ENST00000446690 ARAP2Q8WZ64 1704 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 COL1A1P02452 1464 aaPredicted RBP11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 MYO5AQ9Y4I1 1855 aaKnown RBP11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 EVCP57679 992 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 CEBPZQ03701 1054 aaKnown RBP11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 TMEM67Q5HYA8 995 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 AKNAD1Q5T1N1 836 aa11.17□□□□□ -0.62
COL6A4P1-201ENST00000446690 PROM2Q8N271 834 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms