RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 TTF2Q9UNY4 1162 aaKnown RBP9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 SCN9AQ15858 1988 aa9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 ZNF532Q9HCE3 1301 aa9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 TIAM2Q8IVF5 1701 aa9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 CHD4Q14839 1912 aa9.15□□□□□ -0.94
SF3A3P1-201ENST00000446317 CCDC88AQ3V6T2 1871 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 GRIN3BO60391 1043 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 EGFRP00533 1210 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 PDE6AP16499 860 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 CACNB3P54284 484 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 TBC1D10BQ4KMP7 808 aaPredicted RBP9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 NAA16Q6N069 864 aaPredicted RBP9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 PODNQ7Z5L7 613 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 STK11IPQ8N1F8 1099 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 KBTBD3Q8NAB2 608 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 EVI5LQ96CN4 794 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 ARMT1Q9H993 441 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 DIAPH3Q9NSV4 1193 aa9.15□□□□□ -0.95
SF3A3P1-201ENST00000446317 ASTN2O75129 1339 aaPredicted RBP9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 LTBP3Q9NS15 1303 aa9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 MYO5AQ9Y4I1 1855 aaKnown RBP9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 CLRN2A0PK11 232 aa9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 SEC24BO95487 1268 aa9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 GRIPAP1Q4V328 841 aa9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 SAMD7Q7Z3H4 446 aa9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 ZNF589Q86UQ0 364 aaPredicted RBP9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 WDR66Q8TBY9 1149 aa9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 PUS7LQ9H0K6 701 aaKnown RBP9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 AATFQ9NY61 560 aaKnown RBP eCLIP9.14□□□□□ -0.95
SF3A3P1-201ENST00000446317 FAM205AQ6ZU69 1335 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 AKAP11Q9UKA4 1901 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 FZD9O00144 591 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 SEMA3EO15041 775 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 RNF113AO15541 343 aaKnown RBP9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 PRKAB2O43741 272 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 MBD4O95243 580 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 CHMLP26374 656 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 ADD2P35612 726 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 EPS15P42566 896 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 MFAP1P55081 439 aaKnown RBP9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 MAP3K12Q12852 859 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 BMP2KLQ5H9B9 411 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 STRIP1Q5VSL9 837 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 DLK2Q6UY11 383 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 MICALL2Q8IY33 904 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 LCORLQ8N3X6 602 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 OSBP2Q969R2 916 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 NSUN4Q96CB9 384 aaKnown RBP9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 ZNF512BQ96KM6 892 aaPredicted RBP9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 MYH13Q9UKX3 1938 aa9.13□□□□□ -0.95
SF3A3P1-201ENST00000446317 MAST3O60307 1309 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 TCRBV5S4A2TA0A5A2 114 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 CDC45O75419 566 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 VIL1P09327 827 aaKnown RBP9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 SLURP2P0DP57 97 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 BTDP43251 543 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 CRKP46108 304 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 EVX2Q03828 476 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 PICALMQ13492 652 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 TTF1Q15361 905 aaPredicted RBP9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 CFAP100Q494V2 611 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 VPS53Q5VIR6 699 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 TRPM4Q8TD43 1214 aa9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 SH3RF3Q8TEJ3 882 aaPredicted RBP9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 SAP30BPQ9UHR5 308 aaKnown RBP9.12□□□□□ -0.95
SF3A3P1-201ENST00000446317 SMIM22K7EJ46 135 aa9.11□□□□□ -0.95
SF3A3P1-201ENST00000446317 TNIP1Q15025 636 aa9.11□□□□□ -0.95
SF3A3P1-201ENST00000446317 C8orf34Q49A92 452 aa9.11□□□□□ -0.95
SF3A3P1-201ENST00000446317 SDR42E1Q8WUS8 393 aa9.11□□□□□ -0.95
SF3A3P1-201ENST00000446317 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.11□□□□□ -0.95
SF3A3P1-201ENST00000446317 TDRD3Q9H7E2 651 aaKnown RBP9.11□□□□□ -0.95
SF3A3P1-201ENST00000446317 CNOT7Q9UIV1 285 aaKnown RBP9.11□□□□□ -0.95
SF3A3P1-201ENST00000446317 DAGLAQ9Y4D2 1042 aa9.11□□□□□ -0.95
SF3A3P1-201ENST00000446317 ZNF646O15015 1829 aaPredicted RBP9.11□□□□□ -0.95
SF3A3P1-201ENST00000446317 SBF1O95248 1867 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 CYP2D7A0A087X1C5 515 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 MAGEB6P1A0A0J9YX57 407 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 TCP10L2B9ZVM9 353 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 APPP05067 770 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 USP17L8P0C7I0 530 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 PTH1RQ03431 593 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 TCP10Q12799 353 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 NBPF9Q3BBW0 867 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 EAPPQ56P03 285 aaPredicted RBP9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 SPTY2D1Q68D10 685 aaPredicted RBP9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 MAPKAPK5Q8IW41 473 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 TBC1D22AQ8WUA7 517 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 PRMT6Q96LA8 375 aaPredicted RBP9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 ESYT1Q9BSJ8 1104 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 RRAGCQ9HB90 399 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 VEZTQ9HBM0 779 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 USP40Q9NVE5 1235 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 MROH7-TTC4A0A0A0MT08 1334 aa9.1□□□□□ -0.95
SF3A3P1-201ENST00000446317 GPAA1O43292 621 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 POTEIP0CG38 1075 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 POTEJP0CG39 1038 aa9.09□□□□□ -0.95
SF3A3P1-201ENST00000446317 CYP2D6P10635 497 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms