RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 KIAA0753Q2KHM9 967 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 PLA2G4DQ86XP0 818 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 DHX58Q96C10 678 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 ZSWIM6Q9HCJ5 1215 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 STIM2Q9P246 746 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 SMIM23A6NLE4 172 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 CTNND2Q9UQB3 1225 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 CCDC141Q6ZP82 1450 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 KIF24Q5T7B8 1368 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 TRIM47Q96LD4 638 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 KCNK9Q9NPC2 374 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 SRLQ86TD4 932 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 NCOA7Q8NI08 942 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 CCDC144CPQ8IYA2 1237 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 YY1AP1Q9H869 796 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 MTMR7Q9Y216 660 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 TLDC2A0PJX2 215 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 DAAM2Q86T65 1068 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 IDEP14735 1019 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 UBLCP1Q8WVY7 318 aaPredicted RBP8.86□□□□□ -0.99
SMG1-202ENST00000446231 VCXQ9H320 206 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 PI4KAP2A4QPH2 592 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 PAK2Q13177 524 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 PI4KAP1Q8N8J0 262 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 PCDHA7Q9UN72 937 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 ZFYP08048 801 aaPredicted RBP8.86□□□□□ -0.99
SMG1-202ENST00000446231 TPCN1Q9ULQ1 816 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 ADGRF5Q8IZF2 1346 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 ST5P78524 1137 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 BCAS4Q8TDM0 211 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 EXOC1Q9NV70 894 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 PANX2Q96RD6 677 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 MAP3K2Q9Y2U5 619 aa8.86□□□□□ -0.99
SMG1-202ENST00000446231 SOS1Q07889 1333 aaPredicted RBP8.85□□□□□ -0.99
SMG1-202ENST00000446231 CCDC82Q8N4S0 544 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 SARM1Q6SZW1 724 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 NLRP2Q9NX02 1062 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 EMILIN1Q9Y6C2 1016 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 A0A1W2PRG0 241 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 BICC1Q9H694 974 aaKnown RBP8.85□□□□□ -0.99
SMG1-202ENST00000446231 RTEL1Q9NZ71 1219 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 ABCC4O15439 1325 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 EPRSP07814 1512 aaKnown RBP8.85□□□□□ -0.99
SMG1-202ENST00000446231 UBA7P41226 1012 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 RASEFQ8IZ41 740 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 TACO1Q9BSH4 297 aaKnown RBP8.85□□□□□ -0.99
SMG1-202ENST00000446231 SLC24A3Q9HC58 644 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 ZMYND10O75800 440 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 ADALQ6DHV7 355 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 CCDC197Q8NCU1 140 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 CHUKO15111 745 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 ALDH1L1O75891 902 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 CCDC26Q8TAB7 109 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 PRC1O43663 620 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 SATB1Q01826 763 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 IQUBQ8NA54 791 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 OR8K1Q8NGG5 319 aa8.85□□□□□ -0.99
SMG1-202ENST00000446231 NCOA5Q9HCD5 579 aaKnown RBP8.85□□□□□ -0.99
SMG1-202ENST00000446231 A0A087WWV3 80 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 CFAP221Q4G0U5 840 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 CCDC40Q4G0X9 1142 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 SMIM24O75264 130 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 E2F5Q15329 346 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 DBN1Q16643 649 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 KRT24Q2M2I5 525 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 TTC21AQ8NDW8 1320 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 SUPT6HQ7KZ85 1726 aaKnown RBP8.84□□□□□ -0.99
SMG1-202ENST00000446231 IQCA1Q86XH1 822 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 LSG1Q9H089 658 aaKnown RBP8.84□□□□□ -0.99
SMG1-202ENST00000446231 PSMA7O14818 248 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 HIP1RO75146 1068 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 ZC3H6P61129 1189 aaKnown RBP8.84□□□□□ -0.99
SMG1-202ENST00000446231 CASP8Q14790 479 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 GIGYF1O75420 1035 aaPredicted RBP8.84□□□□□ -0.99
SMG1-202ENST00000446231 SOGA3Q5TF21 947 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 PRM3Q9NNZ6 103 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 RCOR1Q9UKL0 485 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 USP27XA6NNY8 438 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 APBA1Q02410 837 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 CORO7P57737 925 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 CEP128Q6ZU80 1094 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 IDH1O75874 414 aaKnown RBP8.84□□□□□ -0.99
SMG1-202ENST00000446231 PARP9Q8IXQ6 854 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 CHL1O00533 1208 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 IRX1P78414 480 aaPredicted RBP8.84□□□□□ -0.99
SMG1-202ENST00000446231 RNF10Q8N5U6 811 aaKnown RBP8.84□□□□□ -0.99
SMG1-202ENST00000446231 SMARCC2Q8TAQ2 1214 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 ZNF213O14771 459 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 RPSAP08865 295 aaKnown RBP8.84□□□□□ -0.99
SMG1-202ENST00000446231 FBLN1P23142 703 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 PPFIBP2Q8ND30 876 aa8.84□□□□□ -0.99
SMG1-202ENST00000446231 PPANQ9NQ55 473 aaKnown RBP8.84□□□□□ -0.99
SMG1-202ENST00000446231 ASIC1P78348 528 aa8.84□□□□□ -1
SMG1-202ENST00000446231 PPP1R7Q15435 360 aa8.84□□□□□ -1
SMG1-202ENST00000446231 CYP2E1P05181 493 aaPredicted RBP8.83□□□□□ -1
SMG1-202ENST00000446231 NNTQ13423 1086 aa8.83□□□□□ -1
SMG1-202ENST00000446231 SIRT2Q8IXJ6 389 aa8.83□□□□□ -1
SMG1-202ENST00000446231 MYO1AQ9UBC5 1043 aa8.83□□□□□ -1
SMG1-202ENST00000446231 KRT9P35527 623 aa8.83□□□□□ -1
SMG1-202ENST00000446231 VSTM4Q8IW00 320 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms