RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 SRRTQ9BXP5 876 aaKnown RBP8.15□□□□□ -1.1
MCF2-206ENST00000446225 ZFYVE28Q9HCC9 887 aa8.15□□□□□ -1.1
MCF2-206ENST00000446225 SCAF11Q99590 1463 aaKnown RBP8.15□□□□□ -1.1
MCF2-206ENST00000446225 DHX57Q6P158 1386 aaKnown RBP8.15□□□□□ -1.1
MCF2-206ENST00000446225 TK2O00142 265 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 IL2RAP01589 272 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 FSHRP23945 695 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 EVA1CP58658 441 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 PCNX4Q63HM2 1172 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 SP7Q8TDD2 431 aaPredicted RBP8.15□□□□□ -1.11
MCF2-206ENST00000446225 CNKSR1Q969H4 720 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 EVI5LQ96CN4 794 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 UBA5Q9GZZ9 404 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 SCUBE2Q9NQ36 999 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 ST7Q9NRC1 585 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 UBP1Q9NZI7 540 aa8.15□□□□□ -1.11
MCF2-206ENST00000446225 FCF1Q9Y324 198 aaKnown RBP8.15□□□□□ -1.11
MCF2-206ENST00000446225 MED14O60244 1454 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 POTECB2RU33 542 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 PDPK1O15530 556 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 LILRA1O75019 489 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 EXOSC10Q01780 885 aaKnown RBP8.14□□□□□ -1.11
MCF2-206ENST00000446225 ARID5BQ14865 1188 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 DDR2Q16832 855 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 ZNF438Q7Z4V0 828 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 SHDQ96IW2 340 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 SIN3AQ96ST3 1273 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 BCS1LQ9Y276 419 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 NEURL4Q96JN8 1562 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 RPGRIP1LQ68CZ1 1315 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 SPATA31E1Q6ZUB1 1445 aa8.14□□□□□ -1.11
MCF2-206ENST00000446225 PHACTR2O75167 634 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 TRIM37O94972 964 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 CCDC81Q6ZN84 652 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 TSR2Q969E8 191 aaKnown RBP8.13□□□□□ -1.11
MCF2-206ENST00000446225 XAGE2Q96GT9 111 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 WBP1LQ9NX94 342 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 SUPT16HQ9Y5B9 1047 aaKnown RBP8.13□□□□□ -1.11
MCF2-206ENST00000446225 ZNF335Q9H4Z2 1342 aaPredicted RBP8.13□□□□□ -1.11
MCF2-206ENST00000446225 KDM5AP29375 1690 aaKnown RBP8.13□□□□□ -1.11
MCF2-206ENST00000446225 MYO5BQ9ULV0 1848 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 POLR3DP05423 398 aaPredicted RBP8.13□□□□□ -1.11
MCF2-206ENST00000446225 VARSP26640 1264 aaKnown RBP8.13□□□□□ -1.11
MCF2-206ENST00000446225 CNGA1P29973 690 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 NEUROD1Q13562 356 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 RASGRF1Q13972 1273 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 XKR5Q6UX68 686 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 JAMLQ86YT9 394 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 WDR75Q8IWA0 830 aaKnown RBP8.13□□□□□ -1.11
MCF2-206ENST00000446225 RAVER1Q8IY67 606 aaKnown RBP8.13□□□□□ -1.11
MCF2-206ENST00000446225 ATP8A1Q9Y2Q0 1164 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 PLEKHG1Q9ULL1 1385 aa8.13□□□□□ -1.11
MCF2-206ENST00000446225 MICAL2O94851 1124 aa8.12□□□□□ -1.11
MCF2-206ENST00000446225 CDKN1CP49918 316 aaPredicted RBP8.12□□□□□ -1.11
MCF2-206ENST00000446225 FAM160A1Q05DH4 1040 aa8.12□□□□□ -1.11
MCF2-206ENST00000446225 APOBRQ0VD83 1088 aa8.12□□□□□ -1.11
MCF2-206ENST00000446225 GRM2Q14416 872 aa8.12□□□□□ -1.11
MCF2-206ENST00000446225 MAPK8IP1Q9UQF2 711 aa8.12□□□□□ -1.11
MCF2-206ENST00000446225 MAP3K11Q16584 847 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 MAP9Q49MG5 647 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 C2orf27AQ580R0 203 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 CCSAPQ6IQ19 270 aaPredicted RBP8.11□□□□□ -1.11
MCF2-206ENST00000446225 KRT26Q7Z3Y9 468 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 FAM169BQ8N8A8 192 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 RHOVQ96L33 236 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 ESYT1Q9BSJ8 1104 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 KCNQ5Q9NR82 932 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 PPT2Q9UMR5 302 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 ADGRF5Q8IZF2 1346 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 CENPBP07199 599 aaPredicted RBP8.11□□□□□ -1.11
MCF2-206ENST00000446225 MAP3K10Q02779 954 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 TCEA2Q15560 299 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 BRDTQ58F21 947 aaPredicted RBP8.11□□□□□ -1.11
MCF2-206ENST00000446225 HSP90AB4PQ58FF6 505 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 PDE12Q6L8Q7 609 aaKnown RBP8.11□□□□□ -1.11
MCF2-206ENST00000446225 ZNF295-AS1Q8N0V1 137 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 C3orf58Q8NDZ4 430 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 DCAF11Q8TEB1 546 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 SUV39H2Q9H5I1 410 aa8.11□□□□□ -1.11
MCF2-206ENST00000446225 FNDC3AQ9Y2H6 1198 aaKnown RBP8.11□□□□□ -1.11
MCF2-206ENST00000446225 KIF1BO60333 1816 aa8.1□□□□□ -1.11
MCF2-206ENST00000446225 POLR1AO95602 1720 aaPredicted RBP8.1□□□□□ -1.11
MCF2-206ENST00000446225 NEXMIFQ5QGS0 1516 aa8.1□□□□□ -1.11
MCF2-206ENST00000446225 HMGB1P1B2RPK0 211 aaPredicted RBP8.1□□□□□ -1.11
MCF2-206ENST00000446225 PPFIA4O75335 1185 aa8.1□□□□□ -1.11
MCF2-206ENST00000446225 RLBP1P12271 317 aa8.1□□□□□ -1.11
MCF2-206ENST00000446225 PAX3P23760 479 aa8.1□□□□□ -1.11
MCF2-206ENST00000446225 UBE4AQ14139 1066 aa8.1□□□□□ -1.11
MCF2-206ENST00000446225 MTERF2Q49AM1 385 aa8.1□□□□□ -1.11
MCF2-206ENST00000446225 DALRD3Q5D0E6 543 aaKnown RBP8.1□□□□□ -1.11
MCF2-206ENST00000446225 ADAMTS13Q76LX8 1427 aa8.1□□□□□ -1.11
MCF2-206ENST00000446225 GREM1O60565 184 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 ADD1P35611 737 aaKnown RBP8.09□□□□□ -1.11
MCF2-206ENST00000446225 CRKP46108 304 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 ADGRD1Q6QNK2 874 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 THAP3Q8WTV1 239 aaPredicted RBP8.09□□□□□ -1.11
MCF2-206ENST00000446225 WNT2BQ93097 391 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 RELTQ969Z4 430 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 ACTR10Q9NZ32 417 aa8.09□□□□□ -1.11
MCF2-206ENST00000446225 TLR6Q9Y2C9 796 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms