RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 RNF225M0QZC1 329 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 DDX3YO15523 660 aaKnown RBP7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 PAGE1O75459 146 aa7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 ARL4DP49703 201 aa7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 ZNF157P51786 506 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 TSNAXIP1Q2TAA8 658 aa7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 PDZD3Q86UT5 571 aa7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 STK35Q8TDR2 534 aa7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 DCAF11Q8TEB1 546 aa7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 IGSF5Q9NSI5 407 aa7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 GPN3Q9UHW5 284 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P48-201ENST00000446155 WISP1O95388 367 aa7.31□□□□□ -1.24
HMGB1P48-201ENST00000446155 CTSBP07858 339 aa7.31□□□□□ -1.24
HMGB1P48-201ENST00000446155 BMP6P22004 513 aa7.31□□□□□ -1.24
HMGB1P48-201ENST00000446155 GSTM4Q03013 218 aa7.31□□□□□ -1.24
HMGB1P48-201ENST00000446155 PPP2R3AQ06190 1150 aa7.31□□□□□ -1.24
HMGB1P48-201ENST00000446155 AP3B2Q13367 1082 aa7.31□□□□□ -1.24
HMGB1P48-201ENST00000446155 GRIK4Q16099 956 aa7.31□□□□□ -1.24
HMGB1P48-201ENST00000446155 IGF2-ASQ6U949 168 aa7.31□□□□□ -1.24
HMGB1P48-201ENST00000446155 LOC100289279A0A1B0GTE1 492 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 KRBA1A5PL33 1030 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 NME2P22392 152 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 FANCCQ00597 558 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 ZNF252P-AS1Q0IIN9 211 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 CCDC85BQ15834 202 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 RASIP1Q5U651 963 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 SHISA2Q6UWI4 295 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 ERMP1Q7Z2K6 904 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 TMEM87AQ8NBN3 555 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 UBASH3BQ8TF42 649 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 LENG1Q96BZ8 264 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 DCAF5Q96JK2 942 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 METTL5Q9NRN9 209 aaKnown RBP7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 CACNA2D2Q9NY47 1150 aa7.3□□□□□ -1.24
HMGB1P48-201ENST00000446155 SCAMP3O14828 347 aaKnown RBP7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 ECEL1O95672 775 aa7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 DLGAP3O95886 979 aa7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 NLRP12P59046 1061 aa7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 KIAA1211Q6ZU35 1233 aa7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 METTL16Q86W50 562 aaKnown RBP7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 SULF2Q8IWU5 870 aa7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 TMEM130Q8N3G9 435 aa7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 DDX54Q8TDD1 881 aaKnown RBP7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 MRPL18Q9H0U6 180 aaKnown RBP7.29□□□□□ -1.24
HMGB1P48-201ENST00000446155 E9PSI1 815 aa7.28□□□□□ -1.24
HMGB1P48-201ENST00000446155 CYP11A1P05108 521 aa7.28□□□□□ -1.24
HMGB1P48-201ENST00000446155 ARNTP27540 789 aa7.28□□□□□ -1.24
HMGB1P48-201ENST00000446155 RASSF7Q02833 373 aa7.28□□□□□ -1.24
HMGB1P48-201ENST00000446155 POU4F3Q15319 338 aa7.28□□□□□ -1.24
HMGB1P48-201ENST00000446155 PCNX4Q63HM2 1172 aa7.28□□□□□ -1.24
HMGB1P48-201ENST00000446155 Q6ZS46 218 aa7.28□□□□□ -1.24
HMGB1P48-201ENST00000446155 RSRP1Q9BUV0 290 aa7.28□□□□□ -1.24
HMGB1P48-201ENST00000446155 F8W735 103 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P48-201ENST00000446155 ITGB2P05107 769 aa7.27□□□□□ -1.25
HMGB1P48-201ENST00000446155 GSTP1P09211 210 aaKnown RBP7.27□□□□□ -1.25
HMGB1P48-201ENST00000446155 MAOBP27338 520 aa7.27□□□□□ -1.25
HMGB1P48-201ENST00000446155 ZNF76P36508 570 aa7.27□□□□□ -1.25
HMGB1P48-201ENST00000446155 LIG3P49916 1009 aa7.27□□□□□ -1.25
HMGB1P48-201ENST00000446155 RPS26P62854 115 aaKnown RBP7.27□□□□□ -1.25
HMGB1P48-201ENST00000446155 AGMOQ6ZNB7 445 aa7.27□□□□□ -1.25
HMGB1P48-201ENST00000446155 PHC3Q8NDX5 983 aa7.27□□□□□ -1.25
HMGB1P48-201ENST00000446155 NACC1Q96RE7 527 aa7.27□□□□□ -1.25
HMGB1P48-201ENST00000446155 MEGF11A6BM72 1044 aa7.26□□□□□ -1.25
HMGB1P48-201ENST00000446155 C9orf172C9J069 976 aa7.26□□□□□ -1.25
HMGB1P48-201ENST00000446155 CHRNA4P43681 627 aa7.26□□□□□ -1.25
HMGB1P48-201ENST00000446155 HDLBPQ00341 1268 aaKnown RBP7.26□□□□□ -1.25
HMGB1P48-201ENST00000446155 ADGRE1Q14246 886 aa7.26□□□□□ -1.25
HMGB1P48-201ENST00000446155 MBTPS1Q14703 1052 aa7.26□□□□□ -1.25
HMGB1P48-201ENST00000446155 DUOXA2Q1HG44 320 aa7.26□□□□□ -1.25
HMGB1P48-201ENST00000446155 USP26Q9BXU7 913 aa7.26□□□□□ -1.25
HMGB1P48-201ENST00000446155 TMPRSS13Q9BYE2 586 aa7.26□□□□□ -1.25
HMGB1P48-201ENST00000446155 KRT82Q9NSB4 513 aa7.26□□□□□ -1.25
HMGB1P48-201ENST00000446155 RLBP1P12271 317 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 SCARA3Q6AZY7 606 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 TTBK2Q6IQ55 1244 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 ACAD11Q709F0 780 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 CD163Q86VB7 1156 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 GRIN3AQ8TCU5 1115 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 GAL3ST3Q96A11 431 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 RHOVQ96L33 236 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 EMILIN2Q9BXX0 1053 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 CCDC86Q9H6F5 360 aaKnown RBP7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 COPRSQ9NQ92 184 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 CYP8B1Q9UNU6 501 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 SAMM50Q9Y512 469 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 SYNGAP1Q96PV0 1343 aa7.25□□□□□ -1.25
HMGB1P48-201ENST00000446155 APBA3O96018 575 aa7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 TCF3P15923 654 aa7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 TFE3P19532 575 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 NRG1Q02297 640 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 HS2ST1Q7LGA3 356 aa7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 RNF34Q969K3 372 aa7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 CORO1BQ9BR76 489 aa7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 SUGCTQ9HAC7 445 aa7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 KCNQ5Q9NR82 932 aa7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 KBTBD4Q9NVX7 518 aa7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 PCDHGC5Q9Y5F6 944 aa7.24□□□□□ -1.25
HMGB1P48-201ENST00000446155 ZNF862O60290 1169 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms