RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
CALD1-211ENST00000445569 GYG1P46976 350 aa12.35□□□□□ -0.43
CALD1-211ENST00000445569 TOB2Q14106 344 aaPredicted RBP12.35□□□□□ -0.43
CALD1-211ENST00000445569 GSE1Q14687 1217 aa12.35□□□□□ -0.43
CALD1-211ENST00000445569 Q6ZUG5 572 aa12.35□□□□□ -0.43
CALD1-211ENST00000445569 ZNF804AQ7Z570 1209 aa12.35□□□□□ -0.43
CALD1-211ENST00000445569 FBXO33Q7Z6M2 555 aa12.35□□□□□ -0.43
CALD1-211ENST00000445569 COL23A1Q86Y22 540 aaPredicted RBP12.35□□□□□ -0.43
CALD1-211ENST00000445569 FBXL16Q8N461 479 aa12.35□□□□□ -0.43
CALD1-211ENST00000445569 NCOA7Q8NI08 942 aa12.35□□□□□ -0.43
CALD1-211ENST00000445569 TPCN1Q9ULQ1 816 aa12.35□□□□□ -0.43
CALD1-211ENST00000445569 LTBP1Q14766 1721 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 POLRMTO00411 1230 aaKnown RBP12.34□□□□□ -0.43
CALD1-211ENST00000445569 FOXP2O15409 715 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 LARGE1O95461 756 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 FGAP02671 866 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 POLD1P28340 1107 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 ME3Q16798 604 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 SLFNL1Q499Z3 407 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 SPTY2D1Q68D10 685 aaPredicted RBP12.34□□□□□ -0.43
CALD1-211ENST00000445569 C15orf52Q6ZUT6 534 aaKnown RBP12.34□□□□□ -0.43
CALD1-211ENST00000445569 STOX1Q6ZVD7 989 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 GTF3C6Q969F1 213 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 CRAMP1Q96RY5 1269 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 STRBPQ96SI9 672 aaKnown RBP12.34□□□□□ -0.43
CALD1-211ENST00000445569 AGXT2Q9BYV1 514 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 NAPBQ9H115 298 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 CNNM2Q9H8M5 875 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 SALL1Q9NSC2 1324 aa12.34□□□□□ -0.43
CALD1-211ENST00000445569 STX6O43752 255 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 TRAK2O60296 914 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 APPP05067 770 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 ATP2B4P23634 1241 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 GJB2P29033 226 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
CALD1-211ENST00000445569 MCM5P33992 734 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 HMGN5P82970 282 aaKnown RBP12.33□□□□□ -0.44
CALD1-211ENST00000445569 EXOSC10Q01780 885 aaKnown RBP12.33□□□□□ -0.44
CALD1-211ENST00000445569 DDR1Q08345 913 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 CSPP1Q1MSJ5 1256 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 BRF1Q92994 677 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 FAM84BQ96KN1 310 aaPredicted RBP12.33□□□□□ -0.44
CALD1-211ENST00000445569 LLPHQ9BRT6 129 aaKnown RBP12.33□□□□□ -0.44
CALD1-211ENST00000445569 RAI14Q9P0K7 980 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 ANKIB1Q9P2G1 1089 aa12.33□□□□□ -0.44
CALD1-211ENST00000445569 COL11A2P13942 1736 aaPredicted RBP12.33□□□□□ -0.44
CALD1-211ENST00000445569 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
CALD1-211ENST00000445569 KLRG2A4D1S0 409 aaPredicted RBP12.32□□□□□ -0.44
CALD1-211ENST00000445569 PATL2C9JE40 543 aaKnown RBP12.32□□□□□ -0.44
CALD1-211ENST00000445569 SNAP23O00161 211 aa12.32□□□□□ -0.44
CALD1-211ENST00000445569 BBOX1O75936 387 aa12.32□□□□□ -0.44
CALD1-211ENST00000445569 CYP7A1P22680 504 aa12.32□□□□□ -0.44
CALD1-211ENST00000445569 PKP1Q13835 747 aa12.32□□□□□ -0.44
CALD1-211ENST00000445569 NAA16Q6N069 864 aaPredicted RBP12.32□□□□□ -0.44
CALD1-211ENST00000445569 MB21D2Q8IYB1 491 aaPredicted RBP12.32□□□□□ -0.44
CALD1-211ENST00000445569 WDR66Q8TBY9 1149 aa12.32□□□□□ -0.44
CALD1-211ENST00000445569 ZNF274Q96GC6 653 aaPredicted RBP12.32□□□□□ -0.44
CALD1-211ENST00000445569 TCEANC2Q96MN5 208 aa12.32□□□□□ -0.44
CALD1-211ENST00000445569 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
CALD1-211ENST00000445569 RNF41Q9H4P4 317 aaPredicted RBP12.32□□□□□ -0.44
CALD1-211ENST00000445569 ABCF2Q9UG63 623 aa12.32□□□□□ -0.44
CALD1-211ENST00000445569 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
CALD1-211ENST00000445569 PRC1O43663 620 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 DHX16O60231 1041 aaKnown RBP12.31□□□□□ -0.44
CALD1-211ENST00000445569 PFKFB2O60825 505 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 MBD3O95983 291 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 ZSCAN22P10073 491 aaPredicted RBP12.31□□□□□ -0.44
CALD1-211ENST00000445569 SYT1P21579 422 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 DEKP35659 375 aaKnown RBP12.31□□□□□ -0.44
CALD1-211ENST00000445569 TDO2P48775 406 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 KLHL40Q2TBA0 621 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 MCTP1Q6DN14 999 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 CERS3Q8IU89 383 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 KRT23Q9C075 422 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 GGA1Q9UJY5 639 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 ZDHHC9Q9Y397 364 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 IRS2Q9Y4H2 1338 aa12.31□□□□□ -0.44
CALD1-211ENST00000445569 F13A1P00488 732 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 PCP11498 1178 aaKnown RBP12.3□□□□□ -0.44
CALD1-211ENST00000445569 NT5C2P49902 561 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 EVCP57679 992 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 HAND2P61296 217 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 GSTO1P78417 241 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 ST3GAL1Q11201 340 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 GIMAP6Q6P9H5 292 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 DZIP1Q86YF9 867 aaKnown RBP12.3□□□□□ -0.44
CALD1-211ENST00000445569 TMEM87BQ96K49 555 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 MTA3Q9BTC8 594 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 ARMT1Q9H993 441 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 PODXL2Q9NZ53 605 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 SLC4A4Q9Y6R1 1079 aa12.3□□□□□ -0.44
CALD1-211ENST00000445569 NAV1Q8NEY1 1877 aa12.29□□□□□ -0.44
CALD1-211ENST00000445569 PPEF1O14829 653 aaPredicted RBP12.29□□□□□ -0.44
CALD1-211ENST00000445569 UFL1O94874 794 aa12.29□□□□□ -0.44
CALD1-211ENST00000445569 NCLP19338 710 aaKnown RBP12.29□□□□□ -0.44
CALD1-211ENST00000445569 PDE6BP35913 854 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms