RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.25
NCLP1-201ENST00000445357 AFF2P51816 1311 aa16.58■□□□□ 0.24
NCLP1-201ENST00000445357 ECM29Q5VYK3 1845 aa16.58■□□□□ 0.24
NCLP1-201ENST00000445357 KLF18A0A0U1RQI7 1052 aa16.58■□□□□ 0.24
NCLP1-201ENST00000445357 KDM4AO75164 1064 aa16.58■□□□□ 0.24
NCLP1-201ENST00000445357 ZNF396Q96N95 335 aaPredicted RBP16.58■□□□□ 0.24
NCLP1-201ENST00000445357 STRBPQ96SI9 672 aaKnown RBP16.58■□□□□ 0.24
NCLP1-201ENST00000445357 TNMDQ9H2S6 317 aa16.58■□□□□ 0.24
NCLP1-201ENST00000445357 SEC31BQ9NQW1 1179 aa16.58■□□□□ 0.24
NCLP1-201ENST00000445357 NIP7Q9Y221 180 aaKnown RBP eCLIP16.58■□□□□ 0.24
NCLP1-201ENST00000445357 TRDNQ13061 729 aa16.57■□□□□ 0.24
NCLP1-201ENST00000445357 RASGRF1Q13972 1273 aa16.57■□□□□ 0.24
NCLP1-201ENST00000445357 TBC1D10CQ8IV04 446 aa16.57■□□□□ 0.24
NCLP1-201ENST00000445357 BICD2Q8TD16 824 aa16.57■□□□□ 0.24
NCLP1-201ENST00000445357 NGLY1Q96IV0 654 aa16.57■□□□□ 0.24
NCLP1-201ENST00000445357 ZNF652Q9Y2D9 606 aa16.57■□□□□ 0.24
NCLP1-201ENST00000445357 A0A0G2JS52 829 aa16.57■□□□□ 0.24
NCLP1-201ENST00000445357 GOLGA8BA8MQT2 603 aa16.57■□□□□ 0.24
NCLP1-201ENST00000445357 RGL2O15211 777 aa16.57■□□□□ 0.24
NCLP1-201ENST00000445357 IGHMBP2P38935 993 aaKnown RBP16.57■□□□□ 0.24
NCLP1-201ENST00000445357 FAM200AQ8TCP9 573 aa16.57■□□□□ 0.24
NCLP1-201ENST00000445357 COL4A1P02462 1669 aa16.56■□□□□ 0.24
NCLP1-201ENST00000445357 ADCY5O95622 1261 aa16.56■□□□□ 0.24
NCLP1-201ENST00000445357 TYRO3Q06418 890 aa16.56■□□□□ 0.24
NCLP1-201ENST00000445357 MAP3K12Q12852 859 aa16.56■□□□□ 0.24
NCLP1-201ENST00000445357 CLEC4GQ6UXB4 293 aa16.56■□□□□ 0.24
NCLP1-201ENST00000445357 MRVI1Q9Y6F6 885 aa16.56■□□□□ 0.24
NCLP1-201ENST00000445357 FAM177BA6PVY3 158 aa16.55■□□□□ 0.24
NCLP1-201ENST00000445357 ZNF772Q68DY9 489 aaPredicted RBP16.55■□□□□ 0.24
NCLP1-201ENST00000445357 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
NCLP1-201ENST00000445357 USP28Q96RU2 1077 aa16.55■□□□□ 0.24
NCLP1-201ENST00000445357 ANGEL1Q9UNK9 670 aaKnown RBP16.55■□□□□ 0.24
NCLP1-201ENST00000445357 SH2B2O14492 632 aaPredicted RBP16.55■□□□□ 0.24
NCLP1-201ENST00000445357 NR1I2O75469 434 aa16.55■□□□□ 0.24
NCLP1-201ENST00000445357 OFD1O75665 1012 aa16.55■□□□□ 0.24
NCLP1-201ENST00000445357 FOSBP53539 338 aa16.55■□□□□ 0.24
NCLP1-201ENST00000445357 PATL2C9JE40 543 aaKnown RBP16.54■□□□□ 0.24
NCLP1-201ENST00000445357 PTMAP06454 111 aaKnown RBP16.54■□□□□ 0.24
NCLP1-201ENST00000445357 CAMK4Q16566 473 aa16.54■□□□□ 0.24
NCLP1-201ENST00000445357 TMEM87BQ96K49 555 aa16.54■□□□□ 0.24
NCLP1-201ENST00000445357 COL24A1Q17RW2 1714 aa16.54■□□□□ 0.24
NCLP1-201ENST00000445357 APPP05067 770 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 CYB5R4Q7L1T6 521 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 MAGEB6Q8N7X4 407 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 C8orf76Q96K31 380 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
NCLP1-201ENST00000445357 ORC3Q9UBD5 711 aaPredicted RBP16.53■□□□□ 0.24
NCLP1-201ENST00000445357 PNPLA7Q6ZV29 1317 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 KCNQ2O43526 872 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 MBD4O95243 580 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 GUCY1B3Q02153 619 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 CHRNDQ07001 517 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.53■□□□□ 0.24
NCLP1-201ENST00000445357 IFNL3Q8IZI9 196 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 NAP1L5Q96NT1 182 aaPredicted RBP16.53■□□□□ 0.24
NCLP1-201ENST00000445357 CDC5LQ99459 802 aaKnown RBP16.53■□□□□ 0.24
NCLP1-201ENST00000445357 RTEL1Q9NZ71 1219 aa16.53■□□□□ 0.24
NCLP1-201ENST00000445357 SNAP23O00161 211 aa16.52■□□□□ 0.24
NCLP1-201ENST00000445357 CPLX1O14810 134 aa16.52■□□□□ 0.24
NCLP1-201ENST00000445357 SF3B3Q15393 1217 aaKnown RBP16.52■□□□□ 0.24
NCLP1-201ENST00000445357 BRAPQ7Z569 592 aa16.52■□□□□ 0.24
NCLP1-201ENST00000445357 CKAP2LQ8IYA6 745 aa16.52■□□□□ 0.24
NCLP1-201ENST00000445357 FTOQ9C0B1 505 aaKnown RBP eCLIP16.52■□□□□ 0.24
NCLP1-201ENST00000445357 DENND2AQ9ULE3 1009 aa16.52■□□□□ 0.24
NCLP1-201ENST00000445357 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.52■□□□□ 0.24
NCLP1-201ENST00000445357 TAF1P21675 1872 aa16.52■□□□□ 0.23
NCLP1-201ENST00000445357 ZNF804BA4D1E1 1349 aa16.52■□□□□ 0.23
NCLP1-201ENST00000445357 NEDD4P46934 1319 aa16.52■□□□□ 0.23
NCLP1-201ENST00000445357 CNTNAP4Q9C0A0 1308 aa16.52■□□□□ 0.23
NCLP1-201ENST00000445357 CTAGE5O15320 804 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 CAVIN2O95810 425 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 GNAT2P19087 354 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 CEBPZQ03701 1054 aaKnown RBP16.51■□□□□ 0.23
NCLP1-201ENST00000445357 SGMS1Q86VZ5 419 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 LINC00116Q8NCU8 138 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 B4E1Z4 1266 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 AP5Z1O43299 807 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 PPFIA3O75145 1194 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 BCAMP50895 628 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 CCAR1Q8IX12 1150 aaKnown RBP16.51■□□□□ 0.23
NCLP1-201ENST00000445357 IGDCC4Q8TDY8 1250 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 NAPBQ9H115 298 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 QTRT2Q9H974 415 aaKnown RBP16.51■□□□□ 0.23
NCLP1-201ENST00000445357 BTAF1O14981 1849 aa16.51■□□□□ 0.23
NCLP1-201ENST00000445357 NID2Q14112 1375 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 CACNA1SQ13698 1873 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 NHSQ6T4R5 1651 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 GSG1L2A8MUP6 293 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 CDKL5O76039 1030 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 ANO6Q4KMQ2 910 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 SASS6Q6UVJ0 657 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 ENGASEQ8NFI3 743 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 CNNM2Q9H8M5 875 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 ARMT1Q9H993 441 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.5■□□□□ 0.23
NCLP1-201ENST00000445357 MYH13Q9UKX3 1938 aa16.5■□□□□ 0.23
NCLP1-201ENST00000445357 LIFRP42702 1097 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms