RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 RGMBQ6NW40 437 aa29.5■■■□□ 2.31
C9orf3-207ENST00000445181 ERC1Q8IUD2 1116 aa29.5■■■□□ 2.31
C9orf3-207ENST00000445181 SIRT2Q8IXJ6 389 aa29.5■■■□□ 2.31
C9orf3-207ENST00000445181 ARAP2Q8WZ64 1704 aa29.5■■■□□ 2.31
C9orf3-207ENST00000445181 HSPA8P11142 646 aaKnown RBP29.48■■■□□ 2.31
C9orf3-207ENST00000445181 TNNI3KQ59H18 835 aa29.48■■■□□ 2.31
C9orf3-207ENST00000445181 ZBED3Q96IU2 234 aaPredicted RBP29.48■■■□□ 2.31
C9orf3-207ENST00000445181 CRBNQ96SW2 442 aa29.48■■■□□ 2.31
C9orf3-207ENST00000445181 GPR108Q9NPR9 543 aa29.48■■■□□ 2.31
C9orf3-207ENST00000445181 FPGT-TNNI3KV9GXZ4 949 aa29.48■■■□□ 2.31
C9orf3-207ENST00000445181 MYH13Q9UKX3 1938 aa29.47■■■□□ 2.31
C9orf3-207ENST00000445181 NOGQ13253 232 aa29.47■■■□□ 2.31
C9orf3-207ENST00000445181 DLGAP5Q15398 846 aa29.47■■■□□ 2.31
C9orf3-207ENST00000445181 PRAMEF18Q5VWM3 479 aa29.47■■■□□ 2.31
C9orf3-207ENST00000445181 DENND2AQ9ULE3 1009 aa29.47■■■□□ 2.31
C9orf3-207ENST00000445181 TTF2Q9UNY4 1162 aaKnown RBP29.47■■■□□ 2.31
C9orf3-207ENST00000445181 APBB1O00213 710 aa29.46■■■□□ 2.31
C9orf3-207ENST00000445181 SEMA3EO15041 775 aa29.46■■■□□ 2.31
C9orf3-207ENST00000445181 RBM5P52756 815 aaKnown RBP eCLIP29.46■■■□□ 2.312e-7■■■■□ 26.1
C9orf3-207ENST00000445181 WDR66Q8TBY9 1149 aa29.46■■■□□ 2.31
C9orf3-207ENST00000445181 ZNF157P51786 506 aaPredicted RBP29.45■■■□□ 2.31
C9orf3-207ENST00000445181 CCDC102AQ96A19 550 aa29.45■■■□□ 2.31
C9orf3-207ENST00000445181 ZIC5Q96T25 663 aa29.45■■■□□ 2.31
C9orf3-207ENST00000445181 FKBP1BP68106 108 aa29.44■■■□□ 2.3
C9orf3-207ENST00000445181 SUPT16HQ9Y5B9 1047 aaKnown RBP29.44■■■□□ 2.3
C9orf3-207ENST00000445181 FAM155AB1AL88 458 aaPredicted RBP29.43■■■□□ 2.3
C9orf3-207ENST00000445181 CFAP100Q494V2 611 aa29.43■■■□□ 2.3
C9orf3-207ENST00000445181 APOBEC3FQ8IUX4 373 aaKnown RBP29.43■■■□□ 2.3
C9orf3-207ENST00000445181 MTMR14Q8NCE2 650 aa29.43■■■□□ 2.3
C9orf3-207ENST00000445181 COL1A1P02452 1464 aaPredicted RBP29.42■■■□□ 2.3
C9orf3-207ENST00000445181 PCDHAC2Q9Y5I4 1007 aa29.42■■■□□ 2.3
C9orf3-207ENST00000445181 RASGRF1Q13972 1273 aa29.41■■■□□ 2.3
C9orf3-207ENST00000445181 GRIK5Q16478 980 aa29.41■■■□□ 2.3
C9orf3-207ENST00000445181 CCDC158Q5M9N0 1113 aa29.41■■■□□ 2.3
C9orf3-207ENST00000445181 RHPN1Q8TCX5 695 aa29.41■■■□□ 2.3
C9orf3-207ENST00000445181 DBNDD2Q9BQY9 259 aa29.41■■■□□ 2.3
C9orf3-207ENST00000445181 BCL11AQ9H165 835 aa29.41■■■□□ 2.3
C9orf3-207ENST00000445181 SERPINA10Q9UK55 444 aa29.41■■■□□ 2.3
C9orf3-207ENST00000445181 SUGT1Q9Y2Z0 365 aa29.41■■■□□ 2.3
C9orf3-207ENST00000445181 RAB11FIP3O75154 756 aa29.4■■■□□ 2.3
C9orf3-207ENST00000445181 NF2P35240 595 aa29.4■■■□□ 2.3
C9orf3-207ENST00000445181 TTC39AQ5SRH9 613 aa29.4■■■□□ 2.3
C9orf3-207ENST00000445181 MOB2Q70IA6 237 aa29.4■■■□□ 2.3
C9orf3-207ENST00000445181 KIF1BPQ96EK5 621 aa29.4■■■□□ 2.3
C9orf3-207ENST00000445181 CCDC8Q9H0W5 538 aaPredicted RBP29.4■■■□□ 2.3
C9orf3-207ENST00000445181 IL1RAPL2Q9NP60 686 aa29.4■■■□□ 2.3
C9orf3-207ENST00000445181 TSKSQ9UJT2 592 aa29.4■■■□□ 2.3
C9orf3-207ENST00000445181 CA12O43570 354 aa29.39■■■□□ 2.3
C9orf3-207ENST00000445181 MYO1BO43795 1136 aa29.39■■■□□ 2.3
C9orf3-207ENST00000445181 UQCRFS1P1P0C7P4 283 aa29.39■■■□□ 2.3
C9orf3-207ENST00000445181 TTLL12Q14166 644 aaPredicted RBP29.39■■■□□ 2.3
C9orf3-207ENST00000445181 AACSQ86V21 672 aa29.39■■■□□ 2.3
C9orf3-207ENST00000445181 EAF2Q96CJ1 260 aaPredicted RBP29.39■■■□□ 2.3
C9orf3-207ENST00000445181 PRMT6Q96LA8 375 aaPredicted RBP29.39■■■□□ 2.3
C9orf3-207ENST00000445181 MAST3O60307 1309 aa29.39■■■□□ 2.3
C9orf3-207ENST00000445181 SPDYE2BA6NHP3 402 aa29.38■■■□□ 2.29
C9orf3-207ENST00000445181 UBE2Q2LH0YL09 131 aa29.38■■■□□ 2.29
C9orf3-207ENST00000445181 SPDYE6P0CI01 402 aa29.38■■■□□ 2.29
C9orf3-207ENST00000445181 CRKP46108 304 aa29.38■■■□□ 2.29
C9orf3-207ENST00000445181 KIF23Q02241 960 aaPredicted RBP29.38■■■□□ 2.29
C9orf3-207ENST00000445181 ZGPATQ8N5A5 531 aaKnown RBP29.38■■■□□ 2.29
C9orf3-207ENST00000445181 PAPPA2Q9BXP8 1791 aa29.38■■■□□ 2.29
C9orf3-207ENST00000445181 ZBTB22O15209 634 aa29.37■■■□□ 2.29
C9orf3-207ENST00000445181 LDHBP07195 334 aaKnown RBP29.37■■■□□ 2.29
C9orf3-207ENST00000445181 SLC10A3P09131 477 aa29.37■■■□□ 2.29
C9orf3-207ENST00000445181 ARID4AP29374 1257 aaPredicted RBP29.37■■■□□ 2.29
C9orf3-207ENST00000445181 CLASRPQ8N2M8 674 aaKnown RBP29.37■■■□□ 2.29
C9orf3-207ENST00000445181 TLR7Q9NYK1 1049 aaKnown RBP29.37■■■□□ 2.29
C9orf3-207ENST00000445181 DBNLQ9UJU6 430 aaKnown RBP29.37■■■□□ 2.29
C9orf3-207ENST00000445181 CAPN15O75808 1086 aa29.36■■■□□ 2.29
C9orf3-207ENST00000445181 SPATA5Q8NB90 893 aa29.36■■■□□ 2.29
C9orf3-207ENST00000445181 TEKT1Q969V4 418 aa29.36■■■□□ 2.29
C9orf3-207ENST00000445181 DEFB129Q9H1M3 183 aa29.36■■■□□ 2.29
C9orf3-207ENST00000445181 ABCF2Q9UG63 623 aa29.36■■■□□ 2.29
C9orf3-207ENST00000445181 PCDHB15Q9Y5E8 787 aa29.36■■■□□ 2.29
C9orf3-207ENST00000445181 PDS5AQ29RF7 1337 aaKnown RBP29.36■■■□□ 2.29
C9orf3-207ENST00000445181 SALL1Q9NSC2 1324 aa29.36■■■□□ 2.29
C9orf3-207ENST00000445181 CLRN2A0PK11 232 aa29.35■■■□□ 2.29
C9orf3-207ENST00000445181 HMG20BQ9P0W2 317 aa29.35■■■□□ 2.29
C9orf3-207ENST00000445181 PRDX5P30044 214 aa29.34■■■□□ 2.29
C9orf3-207ENST00000445181 HDLBPQ00341 1268 aaKnown RBP29.34■■■□□ 2.29
C9orf3-207ENST00000445181 RASAL3Q86YV0 1011 aa29.34■■■□□ 2.29
C9orf3-207ENST00000445181 MCAMP43121 646 aa29.33■■■□□ 2.29
C9orf3-207ENST00000445181 SPTY2D1Q68D10 685 aaPredicted RBP29.33■■■□□ 2.29
C9orf3-207ENST00000445181 PI16Q6UXB8 463 aa29.33■■■□□ 2.29
C9orf3-207ENST00000445181 VEZTQ9HBM0 779 aa29.33■■■□□ 2.29
C9orf3-207ENST00000445181 AOX1Q06278 1338 aa29.33■■■□□ 2.29
C9orf3-207ENST00000445181 IFIT2P09913 472 aaKnown RBP29.32■■■□□ 2.28
C9orf3-207ENST00000445181 PRKG1Q13976 671 aa29.32■■■□□ 2.28
C9orf3-207ENST00000445181 LRRCC1Q9C099 1032 aa29.32■■■□□ 2.28
C9orf3-207ENST00000445181 AAMPQ13685 434 aa29.31■■■□□ 2.28
C9orf3-207ENST00000445181 ARMC9Q7Z3E5 817 aa29.31■■■□□ 2.28
C9orf3-207ENST00000445181 DZIP1Q86YF9 867 aaKnown RBP29.31■■■□□ 2.28
C9orf3-207ENST00000445181 MRIQ9BWK5 157 aa29.31■■■□□ 2.28
C9orf3-207ENST00000445181 DCTPP1Q9H773 170 aa29.31■■■□□ 2.28
C9orf3-207ENST00000445181 SNRKQ9NRH2 765 aa29.31■■■□□ 2.28
C9orf3-207ENST00000445181 PPP2R3BQ9Y5P8 575 aa29.31■■■□□ 2.28
C9orf3-207ENST00000445181 CSRNP1Q96S65 589 aa29.3■■■□□ 2.28
C9orf3-207ENST00000445181 TDRD3Q9H7E2 651 aaKnown RBP29.3■■■□□ 2.28
C9orf3-207ENST00000445181 HHIPL2Q6UWX4 724 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms