RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 UNCXA6NJT0 531 aa19.39■□□□□ 0.69
SEC13-213ENST00000445064 TCP10L2B9ZVM9 353 aa19.39■□□□□ 0.69
SEC13-213ENST00000445064 ALDH1A1P00352 501 aa19.39■□□□□ 0.69
SEC13-213ENST00000445064 BCAMP50895 628 aa19.39■□□□□ 0.69
SEC13-213ENST00000445064 TNFAIP1Q13829 316 aa19.39■□□□□ 0.69
SEC13-213ENST00000445064 ANKRD13AQ8IZ07 590 aa19.39■□□□□ 0.69
SEC13-213ENST00000445064 VGLL2Q8N8G2 317 aa19.39■□□□□ 0.69
SEC13-213ENST00000445064 IGF2BP3O00425 579 aaKnown RBP eCLIP19.38■□□□□ 0.69
SEC13-213ENST00000445064 GJA5P36382 358 aa19.38■□□□□ 0.69
SEC13-213ENST00000445064 CDAN1Q8IWY9 1227 aa19.38■□□□□ 0.69
SEC13-213ENST00000445064 TEPSINQ96N21 525 aa19.37■□□□□ 0.69
SEC13-213ENST00000445064 TMEM39BQ9GZU3 492 aa19.37■□□□□ 0.69
SEC13-213ENST00000445064 ELP3Q9H9T3 547 aa19.37■□□□□ 0.69
SEC13-213ENST00000445064 ALDH1L2Q3SY69 923 aa19.36■□□□□ 0.69
SEC13-213ENST00000445064 FBXO46Q6PJ61 603 aaPredicted RBP19.36■□□□□ 0.69
SEC13-213ENST00000445064 TBC1D22AQ8WUA7 517 aa19.36■□□□□ 0.69
SEC13-213ENST00000445064 RFX5P48382 616 aaPredicted RBP19.35■□□□□ 0.69
SEC13-213ENST00000445064 TNNI2P48788 182 aa19.35■□□□□ 0.69
SEC13-213ENST00000445064 CACNB3P54284 484 aa19.35■□□□□ 0.69
SEC13-213ENST00000445064 HDLBPQ00341 1268 aaKnown RBP19.35■□□□□ 0.69
SEC13-213ENST00000445064 SMC4Q9NTJ3 1288 aa19.35■□□□□ 0.69
SEC13-213ENST00000445064 IFIT1P09914 478 aaKnown RBP19.34■□□□□ 0.69
SEC13-213ENST00000445064 FGFR2P21802 821 aa19.34■□□□□ 0.69
SEC13-213ENST00000445064 TEKT1Q969V4 418 aa19.34■□□□□ 0.69
SEC13-213ENST00000445064 OPTNQ96CV9 577 aa19.34■□□□□ 0.69
SEC13-213ENST00000445064 PTPN18Q99952 460 aa19.34■□□□□ 0.69
SEC13-213ENST00000445064 EYA2O00167 538 aa19.33■□□□□ 0.68
SEC13-213ENST00000445064 PUM3Q15397 648 aaKnown RBP19.33■□□□□ 0.68
SEC13-213ENST00000445064 OTUD7BQ6GQQ9 843 aa19.33■□□□□ 0.68
SEC13-213ENST00000445064 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.33■□□□□ 0.68
SEC13-213ENST00000445064 TRMT2AQ8IZ69 625 aaKnown RBP19.33■□□□□ 0.68
SEC13-213ENST00000445064 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
SEC13-213ENST00000445064 ARAP2Q8WZ64 1704 aa19.33■□□□□ 0.68
SEC13-213ENST00000445064 TESPA1A2RU30 521 aaPredicted RBP19.32■□□□□ 0.68
SEC13-213ENST00000445064 MAP3K9P80192 1104 aa19.32■□□□□ 0.68
SEC13-213ENST00000445064 MRIQ9BWK5 157 aa19.32■□□□□ 0.68
SEC13-213ENST00000445064 NOB1Q9ULX3 412 aaKnown RBP19.32■□□□□ 0.68
SEC13-213ENST00000445064 CRHR2Q13324 411 aa19.31■□□□□ 0.68
SEC13-213ENST00000445064 APOBEC3HQ6NTF7 200 aaKnown RBP19.31■□□□□ 0.68
SEC13-213ENST00000445064 ATG9AQ7Z3C6 839 aa19.31■□□□□ 0.68
SEC13-213ENST00000445064 MS4A4AQ96JQ5 239 aa19.31■□□□□ 0.68
SEC13-213ENST00000445064 ZDHHC15Q96MV8 337 aa19.31■□□□□ 0.68
SEC13-213ENST00000445064 TRIM17Q9Y577 477 aa19.31■□□□□ 0.68
SEC13-213ENST00000445064 UBTFL1P0CB47 393 aaPredicted RBP19.3■□□□□ 0.68
SEC13-213ENST00000445064 SLC5A1P13866 664 aa19.3■□□□□ 0.68
SEC13-213ENST00000445064 VGLL4Q14135 290 aa19.3■□□□□ 0.68
SEC13-213ENST00000445064 OTOP1Q7RTM1 612 aa19.3■□□□□ 0.68
SEC13-213ENST00000445064 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.3■□□□□ 0.68
SEC13-213ENST00000445064 LPIN2Q92539 896 aa19.3■□□□□ 0.68
SEC13-213ENST00000445064 SIL1Q9H173 461 aa19.3■□□□□ 0.68
SEC13-213ENST00000445064 TNRC18O15417 2968 aaPredicted RBP19.29■□□□□ 0.68
SEC13-213ENST00000445064 KIF16BQ96L93 1317 aa19.29■□□□□ 0.68
SEC13-213ENST00000445064 CD99L2Q8TCZ2 262 aa19.29■□□□□ 0.68
SEC13-213ENST00000445064 TMOD2Q9NZR1 351 aa19.29■□□□□ 0.68
SEC13-213ENST00000445064 SUGT1Q9Y2Z0 365 aa19.29■□□□□ 0.68
SEC13-213ENST00000445064 CSADQ9Y600 493 aa19.29■□□□□ 0.68
SEC13-213ENST00000445064 OTOFQ9HC10 1997 aa19.29■□□□□ 0.68
SEC13-213ENST00000445064 LAMB1P07942 1786 aa19.29■□□□□ 0.68
SEC13-213ENST00000445064 HHIPL2Q6UWX4 724 aa19.28■□□□□ 0.68
SEC13-213ENST00000445064 FAM83AQ86UY5 434 aa19.28■□□□□ 0.68
SEC13-213ENST00000445064 WDR66Q8TBY9 1149 aa19.28■□□□□ 0.68
SEC13-213ENST00000445064 BRI3BPQ8WY22 251 aa19.28■□□□□ 0.68
SEC13-213ENST00000445064 OTUD5Q96G74 571 aa19.28■□□□□ 0.68
SEC13-213ENST00000445064 ERO1AQ96HE7 468 aa19.28■□□□□ 0.68
SEC13-213ENST00000445064 MAST3O60307 1309 aa19.27■□□□□ 0.68
SEC13-213ENST00000445064 CCL15-CCL14A0A0B4J2E2 113 aa19.27■□□□□ 0.68
SEC13-213ENST00000445064 SP3Q02447 781 aa19.27■□□□□ 0.68
SEC13-213ENST00000445064 CCL15Q16663 113 aa19.27■□□□□ 0.68
SEC13-213ENST00000445064 CEP126Q9P2H0 1117 aa19.27■□□□□ 0.68
SEC13-213ENST00000445064 GTF2A2P52657 109 aa19.26■□□□□ 0.67
SEC13-213ENST00000445064 ATP2B3Q16720 1220 aa19.26■□□□□ 0.67
SEC13-213ENST00000445064 FKBP1CQ5VVH2 108 aa19.26■□□□□ 0.67
SEC13-213ENST00000445064 ZKSCAN4Q969J2 545 aaPredicted RBP19.26■□□□□ 0.67
SEC13-213ENST00000445064 API5Q9BZZ5 524 aaKnown RBP19.26■□□□□ 0.67
SEC13-213ENST00000445064 PA2G4Q9UQ80 394 aaKnown RBP19.26■□□□□ 0.67
SEC13-213ENST00000445064 LRRFIP2Q9Y608 721 aaKnown RBP19.26■□□□□ 0.67
SEC13-213ENST00000445064 CIAO1O76071 339 aa19.25■□□□□ 0.67
SEC13-213ENST00000445064 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
SEC13-213ENST00000445064 CAP1Q01518 475 aa19.25■□□□□ 0.67
SEC13-213ENST00000445064 MIGA2Q7L4E1 593 aa19.25■□□□□ 0.67
SEC13-213ENST00000445064 WRNIP1Q96S55 665 aa19.25■□□□□ 0.67
SEC13-213ENST00000445064 FBXO3Q9UK99 471 aa19.25■□□□□ 0.67
SEC13-213ENST00000445064 PTPN22Q9Y2R2 807 aa19.25■□□□□ 0.67
SEC13-213ENST00000445064 SNCAIPQ9Y6H5 919 aa19.25■□□□□ 0.67
SEC13-213ENST00000445064 SPDYE5A6NIY4 337 aa19.24■□□□□ 0.67
SEC13-213ENST00000445064 SLC34A2O95436 690 aa19.24■□□□□ 0.67
SEC13-213ENST00000445064 PRDX5P30044 214 aa19.24■□□□□ 0.67
SEC13-213ENST00000445064 TAF1CQ15572 869 aaPredicted RBP19.24■□□□□ 0.67
SEC13-213ENST00000445064 DIXDC1Q155Q3 683 aa19.24■□□□□ 0.67
SEC13-213ENST00000445064 FAM43AQ8N2R8 423 aa19.24■□□□□ 0.67
SEC13-213ENST00000445064 EFCC1Q9HA90 598 aa19.24■□□□□ 0.67
SEC13-213ENST00000445064 TCP10Q12799 353 aa19.23■□□□□ 0.67
SEC13-213ENST00000445064 CDC42EP5Q6NZY7 148 aa19.23■□□□□ 0.67
SEC13-213ENST00000445064 ERO1BQ86YB8 467 aa19.23■□□□□ 0.67
SEC13-213ENST00000445064 FAM151AQ8WW52 585 aa19.23■□□□□ 0.67
SEC13-213ENST00000445064 HOOK2Q96ED9 719 aa19.23■□□□□ 0.67
SEC13-213ENST00000445064 MEIS3Q99687 375 aa19.23■□□□□ 0.67
SEC13-213ENST00000445064 ZFYVE28Q9HCC9 887 aa19.23■□□□□ 0.67
SEC13-213ENST00000445064 GNL3LQ9NVN8 582 aaKnown RBP19.23■□□□□ 0.67
SEC13-213ENST00000445064 HDAC5Q9UQL6 1122 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms