RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 APOBRQ0VD83 1088 aa22.26■■□□□ 1.15
SEMA3D-202ENST00000444867 GRAPQ13588 217 aa22.26■■□□□ 1.15
SEMA3D-202ENST00000444867 CSPP1Q1MSJ5 1256 aa22.26■■□□□ 1.15
SEMA3D-202ENST00000444867 GRAPLQ8TC17 118 aaPredicted RBP22.26■■□□□ 1.15
SEMA3D-202ENST00000444867 MAST2Q6P0Q8 1798 aa22.26■■□□□ 1.15
SEMA3D-202ENST00000444867 CACNA1SQ13698 1873 aa22.25■■□□□ 1.15
SEMA3D-202ENST00000444867 COL1A1P02452 1464 aaPredicted RBP22.25■■□□□ 1.15
SEMA3D-202ENST00000444867 VPS37CA5D8V6 355 aaPredicted RBP22.25■■□□□ 1.15
SEMA3D-202ENST00000444867 SCRN1Q12765 414 aa22.25■■□□□ 1.15
SEMA3D-202ENST00000444867 TMED8Q6PL24 325 aaPredicted RBP22.25■■□□□ 1.15
SEMA3D-202ENST00000444867 GPT2Q8TD30 523 aa22.25■■□□□ 1.15
SEMA3D-202ENST00000444867 KIF3AQ9Y496 699 aa22.25■■□□□ 1.15
SEMA3D-202ENST00000444867 PRC1O43663 620 aa22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 NCLP19338 710 aaKnown RBP22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 HMGN5P82970 282 aaKnown RBP22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 PRR5LQ6MZQ0 368 aa22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 IFNL3Q8IZI9 196 aa22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 CHAMP1Q96JM3 812 aa22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 NACAP1Q9BZK3 213 aa22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 PDIA3P30101 505 aaKnown RBP22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 ST5P78524 1137 aa22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 CCDC24Q8N4L8 307 aa22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 NBPF3Q9H094 633 aa22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 NAPBQ9H115 298 aa22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 ARMT1Q9H993 441 aa22.24■■□□□ 1.15
SEMA3D-202ENST00000444867 CCDC88AQ3V6T2 1871 aa22.23■■□□□ 1.15
SEMA3D-202ENST00000444867 IGSF3O75054 1194 aa22.23■■□□□ 1.15
SEMA3D-202ENST00000444867 HIBADHP31937 336 aaKnown RBP22.23■■□□□ 1.15
SEMA3D-202ENST00000444867 TXNRD1Q16881 649 aa22.23■■□□□ 1.15
SEMA3D-202ENST00000444867 LEMD3Q9Y2U8 911 aa22.23■■□□□ 1.15
SEMA3D-202ENST00000444867 KIAA1551Q9HCM1 1747 aa22.22■■□□□ 1.15
SEMA3D-202ENST00000444867 CYP7A1P22680 504 aa22.22■■□□□ 1.15
SEMA3D-202ENST00000444867 MRE11P49959 708 aa22.22■■□□□ 1.15
SEMA3D-202ENST00000444867 ZNF445P59923 1031 aa22.22■■□□□ 1.15
SEMA3D-202ENST00000444867 NSUN7Q8NE18 718 aaKnown RBP22.22■■□□□ 1.15
SEMA3D-202ENST00000444867 EPB41L4AQ9HCS5 686 aaPredicted RBP22.22■■□□□ 1.15
SEMA3D-202ENST00000444867 RAI14Q9P0K7 980 aa22.22■■□□□ 1.15
SEMA3D-202ENST00000444867 GSG1L2A8MUP6 293 aa22.21■■□□□ 1.15
SEMA3D-202ENST00000444867 CAVIN1Q6NZI2 390 aaKnown RBP22.21■■□□□ 1.15
SEMA3D-202ENST00000444867 USP48Q86UV5 1035 aa22.21■■□□□ 1.15
SEMA3D-202ENST00000444867 TBC1D10CQ8IV04 446 aa22.21■■□□□ 1.15
SEMA3D-202ENST00000444867 LCORLQ8N3X6 602 aa22.21■■□□□ 1.15
SEMA3D-202ENST00000444867 FAM184AQ8NB25 1140 aa22.21■■□□□ 1.15
SEMA3D-202ENST00000444867 ABCF2Q9UG63 623 aa22.21■■□□□ 1.15
SEMA3D-202ENST00000444867 IQSEC3Q9UPP2 1182 aaPredicted RBP22.21■■□□□ 1.15
SEMA3D-202ENST00000444867 PLSCR1O15162 318 aa22.2■■□□□ 1.15
SEMA3D-202ENST00000444867 JAK2O60674 1132 aa22.2■■□□□ 1.15
SEMA3D-202ENST00000444867 SERPINB2P05120 415 aa22.2■■□□□ 1.15
SEMA3D-202ENST00000444867 ANTXR2P58335 489 aa22.2■■□□□ 1.15
SEMA3D-202ENST00000444867 CRY2Q49AN0 593 aa22.2■■□□□ 1.15
SEMA3D-202ENST00000444867 CHST3Q7LGC8 479 aa22.2■■□□□ 1.15
SEMA3D-202ENST00000444867 CNNM2Q9H8M5 875 aa22.2■■□□□ 1.15
SEMA3D-202ENST00000444867 SLC4A4Q9Y6R1 1079 aa22.2■■□□□ 1.15
SEMA3D-202ENST00000444867 IRS2Q9Y4H2 1338 aa22.2■■□□□ 1.14
SEMA3D-202ENST00000444867 WTIPA6NIX2 430 aaPredicted RBP22.2■■□□□ 1.14
SEMA3D-202ENST00000444867 CDC37L1Q7L3B6 337 aa22.2■■□□□ 1.14
SEMA3D-202ENST00000444867 RPGRQ92834 1020 aaKnown RBP22.2■■□□□ 1.14
SEMA3D-202ENST00000444867 CNPY2Q9Y2B0 182 aa22.2■■□□□ 1.14
SEMA3D-202ENST00000444867 SALL1Q9NSC2 1324 aa22.19■■□□□ 1.14
SEMA3D-202ENST00000444867 MAGEB6P1A0A0J9YX57 407 aa22.19■■□□□ 1.14
SEMA3D-202ENST00000444867 DHX16O60231 1041 aaKnown RBP22.19■■□□□ 1.14
SEMA3D-202ENST00000444867 FOXD4L6Q3SYB3 417 aaPredicted RBP22.19■■□□□ 1.14
SEMA3D-202ENST00000444867 FOXD4L3Q6VB84 417 aaPredicted RBP22.19■■□□□ 1.14
SEMA3D-202ENST00000444867 SYAP1Q96A49 352 aaPredicted RBP22.19■■□□□ 1.14
SEMA3D-202ENST00000444867 TMEM87BQ96K49 555 aa22.19■■□□□ 1.14
SEMA3D-202ENST00000444867 XDHP47989 1333 aa22.18■■□□□ 1.14
SEMA3D-202ENST00000444867 PTPDC1A2A3K4 754 aa22.18■■□□□ 1.14
SEMA3D-202ENST00000444867 CTDNEP1O95476 244 aa22.18■■□□□ 1.14
SEMA3D-202ENST00000444867 TDO2P48775 406 aa22.18■■□□□ 1.14
SEMA3D-202ENST00000444867 ZSCAN23Q3MJ62 389 aa22.18■■□□□ 1.14
SEMA3D-202ENST00000444867 C15orf52Q6ZUT6 534 aaKnown RBP22.18■■□□□ 1.14
SEMA3D-202ENST00000444867 PROM2Q8N271 834 aa22.18■■□□□ 1.14
SEMA3D-202ENST00000444867 RBM17Q96I25 401 aaKnown RBP22.18■■□□□ 1.14
SEMA3D-202ENST00000444867 MYH15Q9Y2K3 1946 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 NAA16Q6N069 864 aaPredicted RBP22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 KRT23Q9C075 422 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 NAP1L2Q9ULW6 460 aaPredicted RBP22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 ANGEL1Q9UNK9 670 aaKnown RBP22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 DUOX1Q9NRD9 1551 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 RGPD3A6NKT7 1758 aaPredicted RBP22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 RGPD4Q7Z3J3 1758 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 KLF18A0A0U1RQI7 1052 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 KLRK1P26718 216 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 UBE2HP62256 183 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 CCT2P78371 535 aaKnown RBP22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 KRT85P78386 507 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 DNM1Q05193 864 aaKnown RBP22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 AKNAD1Q5T1N1 836 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 STAG1Q8WVM7 1258 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 ZSCAN16Q9H4T2 348 aaPredicted RBP22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 GRPEL1Q9HAV7 217 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 GDPD2Q9HCC8 539 aa22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 TNS1Q9HBL0 1735 aaKnown RBP22.17■■□□□ 1.14
SEMA3D-202ENST00000444867 NRXN2Q9P2S2 1712 aa22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 H3BQV1 296 aa22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 SH2B2O14492 632 aaPredicted RBP22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 DTNBO60941 627 aa22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 IFFO2Q5TF58 517 aa22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 MIGA1Q8NAN2 632 aa22.16■■□□□ 1.14
SEMA3D-202ENST00000444867 RIOK1Q9BRS2 568 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms