RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 TEKT1Q969V4 418 aa23■■□□□ 1.27
CCDC188-202ENST00000444532 GPR108Q9NPR9 543 aa23■■□□□ 1.27
CCDC188-202ENST00000444532 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23■■□□□ 1.27
CCDC188-202ENST00000444532 OS9Q13438 667 aaPredicted RBP22.99■■□□□ 1.27
CCDC188-202ENST00000444532 PRAMEF18Q5VWM3 479 aa22.99■■□□□ 1.27
CCDC188-202ENST00000444532 DEFB129Q9H1M3 183 aa22.99■■□□□ 1.27
CCDC188-202ENST00000444532 ZBTB40Q9NUA8 1239 aa22.99■■□□□ 1.27
CCDC188-202ENST00000444532 PPP2R3BQ9Y5P8 575 aa22.99■■□□□ 1.27
CCDC188-202ENST00000444532 PAPPA2Q9BXP8 1791 aa22.99■■□□□ 1.27
CCDC188-202ENST00000444532 CLRN2A0PK11 232 aa22.98■■□□□ 1.27
CCDC188-202ENST00000444532 HSPA1AP0DMV8 641 aaKnown RBP22.98■■□□□ 1.27
CCDC188-202ENST00000444532 HSPA1BP0DMV9 641 aaKnown RBP22.98■■□□□ 1.27
CCDC188-202ENST00000444532 MAP2K2P36507 400 aa22.98■■□□□ 1.27
CCDC188-202ENST00000444532 RGMBQ6NW40 437 aa22.98■■□□□ 1.27
CCDC188-202ENST00000444532 PDS5AQ29RF7 1337 aaKnown RBP22.98■■□□□ 1.27
CCDC188-202ENST00000444532 SALL1Q9NSC2 1324 aa22.98■■□□□ 1.27
CCDC188-202ENST00000444532 THSD7BQ9C0I4 1608 aa22.97■■□□□ 1.27
CCDC188-202ENST00000444532 GRM1Q13255 1194 aa22.97■■□□□ 1.27
CCDC188-202ENST00000444532 SPDYE2Q495Y8 402 aa22.97■■□□□ 1.27
CCDC188-202ENST00000444532 GORABQ5T7V8 394 aa22.97■■□□□ 1.27
CCDC188-202ENST00000444532 HHIPL2Q6UWX4 724 aa22.97■■□□□ 1.27
CCDC188-202ENST00000444532 RPAP2Q8IXW5 612 aaPredicted RBP22.97■■□□□ 1.27
CCDC188-202ENST00000444532 ZDHHC15Q96MV8 337 aa22.97■■□□□ 1.27
CCDC188-202ENST00000444532 TDRD3Q9H7E2 651 aaKnown RBP22.97■■□□□ 1.27
CCDC188-202ENST00000444532 VEZTQ9HBM0 779 aa22.97■■□□□ 1.27
CCDC188-202ENST00000444532 ZNF70Q9UC06 446 aaPredicted RBP22.97■■□□□ 1.27
CCDC188-202ENST00000444532 PCNTO95613 3336 aa22.97■■□□□ 1.27
CCDC188-202ENST00000444532 MAP2K1Q02750 393 aaPredicted RBP22.96■■□□□ 1.27
CCDC188-202ENST00000444532 TNFAIP1Q13829 316 aa22.96■■□□□ 1.27
CCDC188-202ENST00000444532 ZGPATQ8N5A5 531 aaKnown RBP22.96■■□□□ 1.27
CCDC188-202ENST00000444532 CCDC102AQ96A19 550 aa22.96■■□□□ 1.27
CCDC188-202ENST00000444532 AOX1Q06278 1338 aa22.96■■□□□ 1.27
CCDC188-202ENST00000444532 LDHBP07195 334 aaKnown RBP22.95■■□□□ 1.26
CCDC188-202ENST00000444532 RASGRF1Q13972 1273 aa22.95■■□□□ 1.26
CCDC188-202ENST00000444532 C20orf194Q5TEA3 1177 aa22.95■■□□□ 1.26
CCDC188-202ENST00000444532 YTHDC1Q96MU7 727 aaKnown RBP22.95■■□□□ 1.26
CCDC188-202ENST00000444532 WBP1LQ9NX94 342 aa22.95■■□□□ 1.26
CCDC188-202ENST00000444532 ZNF157P51786 506 aaPredicted RBP22.94■■□□□ 1.26
CCDC188-202ENST00000444532 TNNI3KQ59H18 835 aa22.94■■□□□ 1.26
CCDC188-202ENST00000444532 FPGT-TNNI3KV9GXZ4 949 aa22.94■■□□□ 1.26
CCDC188-202ENST00000444532 AOC2O75106 756 aa22.93■■□□□ 1.26
CCDC188-202ENST00000444532 HMMRO75330 724 aa22.93■■□□□ 1.26
CCDC188-202ENST00000444532 NOGQ13253 232 aa22.93■■□□□ 1.26
CCDC188-202ENST00000444532 TTLL12Q14166 644 aaPredicted RBP22.93■■□□□ 1.26
CCDC188-202ENST00000444532 SUPT20HL1Q3ZLR7 823 aa22.93■■□□□ 1.26
CCDC188-202ENST00000444532 HSP90AB4PQ58FF6 505 aa22.93■■□□□ 1.26
CCDC188-202ENST00000444532 APOBEC3HQ6NTF7 200 aaKnown RBP22.93■■□□□ 1.26
CCDC188-202ENST00000444532 ERC1Q8IUD2 1116 aa22.93■■□□□ 1.26
CCDC188-202ENST00000444532 UQCRFS1P1P0C7P4 283 aa22.92■■□□□ 1.26
CCDC188-202ENST00000444532 ARID4AP29374 1257 aaPredicted RBP22.92■■□□□ 1.26
CCDC188-202ENST00000444532 PRDX5P30044 214 aa22.92■■□□□ 1.26
CCDC188-202ENST00000444532 TNNI2P48788 182 aa22.92■■□□□ 1.26
CCDC188-202ENST00000444532 RASA3Q14644 834 aa22.92■■□□□ 1.26
CCDC188-202ENST00000444532 SPTY2D1Q68D10 685 aaPredicted RBP22.92■■□□□ 1.26
CCDC188-202ENST00000444532 ARMC9Q7Z3E5 817 aa22.92■■□□□ 1.26
CCDC188-202ENST00000444532 AIDAQ96BJ3 306 aa22.92■■□□□ 1.26
CCDC188-202ENST00000444532 FAM155AB1AL88 458 aaPredicted RBP22.91■■□□□ 1.26
CCDC188-202ENST00000444532 UBE2Q2LH0YL09 131 aa22.91■■□□□ 1.26
CCDC188-202ENST00000444532 MOB2Q70IA6 237 aa22.91■■□□□ 1.26
CCDC188-202ENST00000444532 CCDC158Q5M9N0 1113 aa22.9■■□□□ 1.26
CCDC188-202ENST00000444532 FKBP1CQ5VVH2 108 aa22.9■■□□□ 1.26
CCDC188-202ENST00000444532 SPATA5Q8NB90 893 aa22.9■■□□□ 1.26
CCDC188-202ENST00000444532 TMOD2Q9NZR1 351 aa22.9■■□□□ 1.26
CCDC188-202ENST00000444532 HMG20BQ9P0W2 317 aa22.9■■□□□ 1.26
CCDC188-202ENST00000444532 EXOC6BQ9Y2D4 811 aa22.9■■□□□ 1.26
CCDC188-202ENST00000444532 TCP10L2B9ZVM9 353 aa22.89■■□□□ 1.25
CCDC188-202ENST00000444532 PPP1R12BO60237 982 aaPredicted RBP22.89■■□□□ 1.25
CCDC188-202ENST00000444532 SLC10A3P09131 477 aa22.89■■□□□ 1.25
CCDC188-202ENST00000444532 SLF2Q8IX21 1173 aa22.89■■□□□ 1.25
CCDC188-202ENST00000444532 SIRT2Q8IXJ6 389 aa22.89■■□□□ 1.25
CCDC188-202ENST00000444532 DBNDD2Q9BQY9 259 aa22.89■■□□□ 1.25
CCDC188-202ENST00000444532 BEGAINQ9BUH8 593 aa22.89■■□□□ 1.25
CCDC188-202ENST00000444532 ABCF2Q9UG63 623 aa22.89■■□□□ 1.25
CCDC188-202ENST00000444532 DAGLAQ9Y4D2 1042 aa22.89■■□□□ 1.25
CCDC188-202ENST00000444532 FOXN1O15353 648 aa22.88■■□□□ 1.25
CCDC188-202ENST00000444532 DIXDC1Q155Q3 683 aa22.88■■□□□ 1.25
CCDC188-202ENST00000444532 MAP3K11Q16584 847 aa22.88■■□□□ 1.25
CCDC188-202ENST00000444532 TTC39AQ5SRH9 613 aa22.88■■□□□ 1.25
CCDC188-202ENST00000444532 NBPF12Q5TAG4 269 aaPredicted RBP22.88■■□□□ 1.25
CCDC188-202ENST00000444532 FAM83AQ86UY5 434 aa22.88■■□□□ 1.25
CCDC188-202ENST00000444532 MYH2Q9UKX2 1941 aa22.88■■□□□ 1.25
CCDC188-202ENST00000444532 MCAMP43121 646 aa22.87■■□□□ 1.25
CCDC188-202ENST00000444532 PRKG1Q13976 671 aa22.87■■□□□ 1.25
CCDC188-202ENST00000444532 LDLRAD1Q5T700 205 aa22.87■■□□□ 1.25
CCDC188-202ENST00000444532 ERICH6Q7L0X2 663 aa22.87■■□□□ 1.25
CCDC188-202ENST00000444532 DZIP1Q86YF9 867 aaKnown RBP22.87■■□□□ 1.25
CCDC188-202ENST00000444532 EAF2Q96CJ1 260 aaPredicted RBP22.87■■□□□ 1.25
CCDC188-202ENST00000444532 FAM163AQ96GL9 167 aaPredicted RBP22.87■■□□□ 1.25
CCDC188-202ENST00000444532 ZNF512BQ96KM6 892 aaPredicted RBP22.87■■□□□ 1.25
CCDC188-202ENST00000444532 TEPSINQ96N21 525 aa22.87■■□□□ 1.25
CCDC188-202ENST00000444532 ANGEL1Q9UNK9 670 aaKnown RBP22.87■■□□□ 1.25
CCDC188-202ENST00000444532 SSC5DA1L4H1 1573 aa22.86■■□□□ 1.25
CCDC188-202ENST00000444532 UNCXA6NJT0 531 aa22.86■■□□□ 1.25
CCDC188-202ENST00000444532 CTCFP49711 727 aaPredicted RBP22.86■■□□□ 1.25
CCDC188-202ENST00000444532 RASAL3Q86YV0 1011 aa22.86■■□□□ 1.25
CCDC188-202ENST00000444532 CACNB3P54284 484 aa22.85■■□□□ 1.25
CCDC188-202ENST00000444532 CDC42EP5Q6NZY7 148 aa22.85■■□□□ 1.25
CCDC188-202ENST00000444532 PI16Q6UXB8 463 aa22.85■■□□□ 1.25
CCDC188-202ENST00000444532 REM2Q8IYK8 340 aaPredicted RBP22.85■■□□□ 1.25
CCDC188-202ENST00000444532 RHPN1Q8TCX5 695 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms