RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 SPATA5Q8NB90 893 aa21.41■■□□□ 1.02
SMARCAL1-209ENST00000444508 CREBZFQ9NS37 354 aa21.41■■□□□ 1.02
SMARCAL1-209ENST00000444508 DBNLQ9UJU6 430 aaKnown RBP21.41■■□□□ 1.02
SMARCAL1-209ENST00000444508 PCDHB15Q9Y5E8 787 aa21.41■■□□□ 1.02
SMARCAL1-209ENST00000444508 CRKP46108 304 aa21.4■■□□□ 1.02
SMARCAL1-209ENST00000444508 HTRA3P83110 453 aa21.4■■□□□ 1.02
SMARCAL1-209ENST00000444508 FMR1Q06787 632 aaKnown RBP eCLIP21.4■■□□□ 1.02
SMARCAL1-209ENST00000444508 TEKT1Q969V4 418 aa21.4■■□□□ 1.02
SMARCAL1-209ENST00000444508 TLR7Q9NYK1 1049 aaKnown RBP21.4■■□□□ 1.02
SMARCAL1-209ENST00000444508 HMG20BQ9P0W2 317 aa21.4■■□□□ 1.02
SMARCAL1-209ENST00000444508 ECM29Q5VYK3 1845 aa21.4■■□□□ 1.02
SMARCAL1-209ENST00000444508 CELF2O95319 508 aaKnown RBP21.39■■□□□ 1.01
SMARCAL1-209ENST00000444508 SPTY2D1Q68D10 685 aaPredicted RBP21.39■■□□□ 1.01
SMARCAL1-209ENST00000444508 APOBEC3FQ8IUX4 373 aaKnown RBP21.39■■□□□ 1.01
SMARCAL1-209ENST00000444508 PRMT6Q96LA8 375 aaPredicted RBP21.39■■□□□ 1.01
SMARCAL1-209ENST00000444508 MRIQ9BWK5 157 aa21.39■■□□□ 1.01
SMARCAL1-209ENST00000444508 BCL11AQ9H165 835 aa21.39■■□□□ 1.01
SMARCAL1-209ENST00000444508 ZNF408Q9H9D4 720 aa21.39■■□□□ 1.01
SMARCAL1-209ENST00000444508 ABCF2Q9UG63 623 aa21.39■■□□□ 1.01
SMARCAL1-209ENST00000444508 PCDHAC2Q9Y5I4 1007 aa21.39■■□□□ 1.01
SMARCAL1-209ENST00000444508 IFIT2P09913 472 aaKnown RBP21.38■■□□□ 1.01
SMARCAL1-209ENST00000444508 PRDX5P30044 214 aa21.38■■□□□ 1.01
SMARCAL1-209ENST00000444508 MCAMP43121 646 aa21.38■■□□□ 1.01
SMARCAL1-209ENST00000444508 ZNF512BQ96KM6 892 aaPredicted RBP21.38■■□□□ 1.01
SMARCAL1-209ENST00000444508 LRRCC1Q9C099 1032 aa21.38■■□□□ 1.01
SMARCAL1-209ENST00000444508 DCTPP1Q9H773 170 aa21.38■■□□□ 1.01
SMARCAL1-209ENST00000444508 PI16Q6UXB8 463 aa21.37■■□□□ 1.01
SMARCAL1-209ENST00000444508 DZIP1Q86YF9 867 aaKnown RBP21.37■■□□□ 1.01
SMARCAL1-209ENST00000444508 VEZTQ9HBM0 779 aa21.37■■□□□ 1.01
SMARCAL1-209ENST00000444508 CEP350Q5VT06 3117 aa21.37■■□□□ 1.01
SMARCAL1-209ENST00000444508 CLRN2A0PK11 232 aa21.36■■□□□ 1.01
SMARCAL1-209ENST00000444508 HHIPL2Q6UWX4 724 aa21.36■■□□□ 1.01
SMARCAL1-209ENST00000444508 CDCA5Q96FF9 252 aa21.36■■□□□ 1.01
SMARCAL1-209ENST00000444508 ZDHHC15Q96MV8 337 aa21.36■■□□□ 1.01
SMARCAL1-209ENST00000444508 ABT1Q9ULW3 272 aaKnown RBP21.36■■□□□ 1.01
SMARCAL1-209ENST00000444508 CST9Q5W186 159 aa21.35■■□□□ 1.01
SMARCAL1-209ENST00000444508 DLK2Q6UY11 383 aa21.35■■□□□ 1.01
SMARCAL1-209ENST00000444508 ERICH6Q7L0X2 663 aa21.35■■□□□ 1.01
SMARCAL1-209ENST00000444508 SLF2Q8IX21 1173 aa21.35■■□□□ 1.01
SMARCAL1-209ENST00000444508 EXOC6Q8TAG9 804 aa21.35■■□□□ 1.01
SMARCAL1-209ENST00000444508 SNRKQ9NRH2 765 aa21.35■■□□□ 1.01
SMARCAL1-209ENST00000444508 SCAF8Q9UPN6 1271 aaKnown RBP21.35■■□□□ 1.01
SMARCAL1-209ENST00000444508 DIXDC1Q155Q3 683 aa21.34■■□□□ 1.01
SMARCAL1-209ENST00000444508 SPDYE2Q495Y8 402 aa21.34■■□□□ 1.01
SMARCAL1-209ENST00000444508 TDRD3Q9H7E2 651 aaKnown RBP21.34■■□□□ 1.01
SMARCAL1-209ENST00000444508 ZNF70Q9UC06 446 aaPredicted RBP21.34■■□□□ 1.01
SMARCAL1-209ENST00000444508 TNFAIP1Q13829 316 aa21.33■■□□□ 1.01
SMARCAL1-209ENST00000444508 TBC1D9Q6ZT07 1266 aa21.33■■□□□ 1.01
SMARCAL1-209ENST00000444508 TMOD2Q9NZR1 351 aa21.33■■□□□ 1.01
SMARCAL1-209ENST00000444508 RAI14Q9P0K7 980 aa21.33■■□□□ 1.01
SMARCAL1-209ENST00000444508 LRP2BPQ9P2M1 347 aa21.33■■□□□ 1.01
SMARCAL1-209ENST00000444508 DAGLAQ9Y4D2 1042 aa21.33■■□□□ 1.01
SMARCAL1-209ENST00000444508 AKAP11Q9UKA4 1901 aa21.33■■□□□ 1
SMARCAL1-209ENST00000444508 AOX1Q06278 1338 aa21.32■■□□□ 1
SMARCAL1-209ENST00000444508 SMARCA5O60264 1052 aaPredicted RBP21.32■■□□□ 1
SMARCAL1-209ENST00000444508 NF2P35240 595 aa21.32■■□□□ 1
SMARCAL1-209ENST00000444508 C2orf69Q8N8R5 385 aa21.32■■□□□ 1
SMARCAL1-209ENST00000444508 DEFB129Q9H1M3 183 aa21.32■■□□□ 1
SMARCAL1-209ENST00000444508 PPP2R3BQ9Y5P8 575 aa21.32■■□□□ 1
SMARCAL1-209ENST00000444508 ZAP70P43403 619 aa21.31■■□□□ 1
SMARCAL1-209ENST00000444508 GSTO1P78417 241 aa21.31■■□□□ 1
SMARCAL1-209ENST00000444508 HDAC1Q13547 482 aaPredicted RBP21.31■■□□□ 1
SMARCAL1-209ENST00000444508 APOBEC3HQ6NTF7 200 aaKnown RBP21.31■■□□□ 1
SMARCAL1-209ENST00000444508 GBA2Q9HCG7 927 aaPredicted RBP21.31■■□□□ 1
SMARCAL1-209ENST00000444508 MYH2Q9UKX2 1941 aa21.31■■□□□ 1
SMARCAL1-209ENST00000444508 TNNI2P48788 182 aa21.3■■□□□ 1
SMARCAL1-209ENST00000444508 MECOMQ03112 1051 aa21.3■■□□□ 1
SMARCAL1-209ENST00000444508 PRAMEF18Q5VWM3 479 aa21.3■■□□□ 1
SMARCAL1-209ENST00000444508 DNAJC5GQ8N7S2 189 aa21.3■■□□□ 1
SMARCAL1-209ENST00000444508 KLRG1Q96E93 195 aa21.3■■□□□ 1
SMARCAL1-209ENST00000444508 MKRN1Q9UHC7 482 aaKnown RBP21.3■■□□□ 1
SMARCAL1-209ENST00000444508 TLL2Q9Y6L7 1015 aa21.3■■□□□ 1
SMARCAL1-209ENST00000444508 TCP10L2B9ZVM9 353 aa21.29■■□□□ 1
SMARCAL1-209ENST00000444508 CYP2E1P05181 493 aaPredicted RBP21.29■■□□□ 1
SMARCAL1-209ENST00000444508 LDHCP07864 332 aa21.29■■□□□ 1
SMARCAL1-209ENST00000444508 IRX6P78412 446 aaPredicted RBP21.29■■□□□ 1
SMARCAL1-209ENST00000444508 DEFB115Q30KQ5 88 aa21.29■■□□□ 1
SMARCAL1-209ENST00000444508 RWDD1Q9H446 243 aaPredicted RBP21.29■■□□□ 1
SMARCAL1-209ENST00000444508 ZBTB47Q9UFB7 747 aaPredicted RBP21.29■■□□□ 1
SMARCAL1-209ENST00000444508 GAKO14976 1311 aa21.29■■□□□ 1
SMARCAL1-209ENST00000444508 CNTNAP1P78357 1384 aa21.28■■□□□ 1
SMARCAL1-209ENST00000444508 RASSF10A6NK89 507 aa21.28■■□□□ 1
SMARCAL1-209ENST00000444508 RASA3Q14644 834 aa21.28■■□□□ 1
SMARCAL1-209ENST00000444508 SAPCD2Q86UD0 394 aa21.28■■□□□ 1
SMARCAL1-209ENST00000444508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.28■■□□□ 1
SMARCAL1-209ENST00000444508 NSUN4Q96CB9 384 aaKnown RBP21.28■■□□□ 1
SMARCAL1-209ENST00000444508 GCC1Q96CN9 775 aa21.28■■□□□ 1
SMARCAL1-209ENST00000444508 FAM163AQ96GL9 167 aaPredicted RBP21.28■■□□□ 1
SMARCAL1-209ENST00000444508 MAST2Q6P0Q8 1798 aa21.28■■□□□ 1
SMARCAL1-209ENST00000444508 MROH7-TTC4A0A0A0MT08 1334 aa21.28■■□□□ 1
SMARCAL1-209ENST00000444508 IGSF3O75054 1194 aa21.27■■□□□ 1
SMARCAL1-209ENST00000444508 CACNB3P54284 484 aa21.27■■□□□ 1
SMARCAL1-209ENST00000444508 FKBP1BP68106 108 aa21.27■■□□□ 1
SMARCAL1-209ENST00000444508 FKBP1CQ5VVH2 108 aa21.27■■□□□ 1
SMARCAL1-209ENST00000444508 PAXIP1Q6ZW49 1069 aaPredicted RBP21.27■■□□□ 1
SMARCAL1-209ENST00000444508 GPATCH3Q96I76 525 aa21.27■■□□□ 1
SMARCAL1-209ENST00000444508 PIH1D3Q9NQM4 214 aaKnown RBP21.27■■□□□ 1
SMARCAL1-209ENST00000444508 HUNKP57058 714 aa21.26■□□□□ 0.99
SMARCAL1-209ENST00000444508 TTLL12Q14166 644 aaPredicted RBP21.26■□□□□ 0.99
SMARCAL1-209ENST00000444508 TTF1Q15361 905 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms