RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 ZAP70P43403 619 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 AK2P54819 239 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 FKBP4Q02790 459 aaKnown RBP eCLIP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 PTH1RQ03431 593 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 RASGRF1Q13972 1273 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 SART3Q15020 963 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 KLHL40Q2TBA0 621 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 SOGA3Q5TF21 947 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 TSHZ3Q63HK5 1081 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 NAA16Q6N069 864 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 PRPF40BQ6NWY9 871 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 CPLX2Q6PUV4 134 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 RALYLQ86SE5 291 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 ZNF589Q86UQ0 364 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 VPS37DQ86XT2 251 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 RASEFQ8IZ41 740 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 SYNE4Q8N205 404 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 SUPT20HQ8NEM7 779 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 SMARCC2Q8TAQ2 1214 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 STAG1Q8WVM7 1258 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 ANKS1AQ92625 1134 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 RPGRQ92834 1020 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 GTF3C6Q969F1 213 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 CNKSR1Q969H4 720 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 OSBP2Q969R2 916 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 AIDAQ96BJ3 306 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 NSUN4Q96CB9 384 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 MASTLQ96GX5 879 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 JAKMIP1Q96N16 626 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 EYA3Q99504 573 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 DNAJC2Q99543 621 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 RTFDC1Q9BY42 306 aaPredicted RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 COA1Q9GZY4 146 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 IL25Q9H293 177 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 PDRG1Q9NUG6 133 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 TCP11L1Q9NUJ3 509 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 RBM27Q9P2N5 1060 aaKnown RBP3.34□□□□□ -1.87
LINC00393-201ENST00000443621 PALD1Q9ULE6 856 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 SYNPO2Q9UMS6 1093 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 ATP6V0A2Q9Y487 856 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 KIF13BQ9NQT8 1826 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 MYO3BQ8WXR4 1341 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 CACNA1SQ13698 1873 aa3.34□□□□□ -1.87
LINC00393-201ENST00000443621 CHD4Q14839 1912 aa3.34□□□□□ -1.88
LINC00393-201ENST00000443621 COL2A1P02458 1487 aaPredicted RBP3.34□□□□□ -1.88
LINC00393-201ENST00000443621 FOCADQ5VW36 1801 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 ANKRD31Q8N7Z5 1873 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 GSG1L2A8MUP6 293 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 STX6O43752 255 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 ORC4O43929 436 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 TRIM37O94972 964 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 CD2BP2O95400 341 aaKnown RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 CAVIN2O95810 425 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 APBA3O96018 575 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 ADORA1P30542 326 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 PHKA1P46020 1223 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 BAG6P46379 1132 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 TOB2Q14106 344 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 SLC15A2Q16348 729 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 ADCK5Q3MIX3 580 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 AKNAD1Q5T1N1 836 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 AMOTL1Q8IY63 956 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 MB21D2Q8IYB1 491 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 IFNL3Q8IZI9 196 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 WASF1Q92558 559 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 ESR2Q92731 530 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 JARID2Q92833 1246 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 CELF1Q92879 486 aaKnown RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 TNPO1Q92973 898 aaKnown RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 SYAP1Q96A49 352 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 CAMKK2Q96RR4 588 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 RIOK1Q9BRS2 568 aaKnown RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 NOL10Q9BSC4 688 aaKnown RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 CRNKL1Q9BZJ0 848 aaKnown RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 SCAND2PQ9GZW5 306 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 PUS7LQ9H0K6 701 aaKnown RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 NAPBQ9H115 298 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 SEC31BQ9NQW1 1179 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 TFCP2L1Q9NZI6 479 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 LRP2BPQ9P2M1 347 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 ARPP21Q9UBL0 812 aaPredicted RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 GGA1Q9UJY5 639 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 CFAP45Q9UL16 551 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 ANGEL1Q9UNK9 670 aaKnown RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 SMC3Q9UQE7 1217 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 PARP3Q9Y6F1 533 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 ZNF532Q9HCE3 1301 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 STK36Q9NRP7 1315 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 ROBO3Q96MS0 1386 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 TNRC6CQ9HCJ0 1690 aaKnown RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 PSME4Q14997 1843 aa3.33□□□□□ -1.88
LINC00393-201ENST00000443621 MYO5AQ9Y4I1 1855 aaKnown RBP3.33□□□□□ -1.88
LINC00393-201ENST00000443621 GPR75-ASB3A0A0A6YYF3 556 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 MAGEB6P1A0A0J9YX57 407 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 ERICH2A1L162 156 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 H0YIN7 160 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 M0R2C6 588 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 NPHP1O15259 732 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 FOXP2O15409 715 aa3.32□□□□□ -1.88
LINC00393-201ENST00000443621 IDH1O75874 414 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms