RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 TAF1CQ15572 869 aaPredicted RBP26.34■■□□□ 1.81
POLR2J3-202ENST00000443430 TAF7LQ5H9L4 462 aa26.34■■□□□ 1.81
POLR2J3-202ENST00000443430 ZFYVE28Q9HCC9 887 aa26.34■■□□□ 1.81
POLR2J3-202ENST00000443430 PTCH2Q9Y6C5 1203 aa26.34■■□□□ 1.81
POLR2J3-202ENST00000443430 CCL15-CCL14A0A0B4J2E2 113 aa26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 TCP10L2B9ZVM9 353 aa26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 GYG1P46976 350 aa26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 FXR1P51114 621 aaKnown RBP eCLIP26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 GTF2A2P52657 109 aa26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 UBE4AQ14139 1066 aa26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 ARHGEF6Q15052 776 aa26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 CCL15Q16663 113 aa26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 FAM43AQ8N2R8 423 aa26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 FAM84BQ96KN1 310 aaPredicted RBP26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 TMEM39BQ9GZU3 492 aa26.33■■□□□ 1.81
POLR2J3-202ENST00000443430 HIBADHP31937 336 aaKnown RBP26.32■■□□□ 1.8
POLR2J3-202ENST00000443430 SLC9C1Q4G0N8 1177 aa26.32■■□□□ 1.8
POLR2J3-202ENST00000443430 CEP290O15078 2479 aa26.32■■□□□ 1.8
POLR2J3-202ENST00000443430 ARAP2Q8WZ64 1704 aa26.31■■□□□ 1.8
POLR2J3-202ENST00000443430 GRM8O00222 908 aa26.31■■□□□ 1.8
POLR2J3-202ENST00000443430 CRKP46108 304 aa26.31■■□□□ 1.8
POLR2J3-202ENST00000443430 NBPF11Q86T75 865 aa26.31■■□□□ 1.8
POLR2J3-202ENST00000443430 TNNI2P48788 182 aa26.3■■□□□ 1.8
POLR2J3-202ENST00000443430 NCBP3Q53F19 620 aaKnown RBP26.3■■□□□ 1.8
POLR2J3-202ENST00000443430 OTUD5Q96G74 571 aa26.3■■□□□ 1.8
POLR2J3-202ENST00000443430 CSADQ9Y600 493 aa26.3■■□□□ 1.8
POLR2J3-202ENST00000443430 GRIK5Q16478 980 aa26.29■■□□□ 1.8
POLR2J3-202ENST00000443430 EXOSC9Q06265 439 aaKnown RBP26.28■■□□□ 1.8
POLR2J3-202ENST00000443430 PUS3Q9BZE2 481 aaKnown RBP26.28■■□□□ 1.8
POLR2J3-202ENST00000443430 COLQQ9Y215 455 aaPredicted RBP26.28■■□□□ 1.8
POLR2J3-202ENST00000443430 SPDYE5A6NIY4 337 aa26.27■■□□□ 1.8
POLR2J3-202ENST00000443430 SLC4A8Q2Y0W8 1093 aa26.27■■□□□ 1.8
POLR2J3-202ENST00000443430 ZSWIM8A7E2V4 1837 aa26.27■■□□□ 1.8
POLR2J3-202ENST00000443430 C9orf78Q9NZ63 289 aaPredicted RBP26.26■■□□□ 1.79
POLR2J3-202ENST00000443430 TRIOBPQ9H2D6 2365 aa26.26■■□□□ 1.79
POLR2J3-202ENST00000443430 TLR2O60603 784 aa26.25■■□□□ 1.79
POLR2J3-202ENST00000443430 MYCP01106 439 aaPredicted RBP26.25■■□□□ 1.79
POLR2J3-202ENST00000443430 ARHGAP39Q9C0H5 1083 aa26.25■■□□□ 1.79
POLR2J3-202ENST00000443430 RIPOR2Q9Y4F9 1068 aa26.25■■□□□ 1.79
POLR2J3-202ENST00000443430 SNCAIPQ9Y6H5 919 aa26.25■■□□□ 1.79
POLR2J3-202ENST00000443430 CACNB3P54284 484 aa26.24■■□□□ 1.79
POLR2J3-202ENST00000443430 HDLBPQ00341 1268 aaKnown RBP26.24■■□□□ 1.79
POLR2J3-202ENST00000443430 FBXO33Q7Z6M2 555 aa26.24■■□□□ 1.79
POLR2J3-202ENST00000443430 WDR63Q8IWG1 891 aa26.24■■□□□ 1.79
POLR2J3-202ENST00000443430 SH3TC2Q8TF17 1288 aa26.24■■□□□ 1.79
POLR2J3-202ENST00000443430 KAZALD1Q96I82 304 aa26.24■■□□□ 1.79
POLR2J3-202ENST00000443430 ZCCHC17Q9NP64 241 aaKnown RBP26.24■■□□□ 1.79
POLR2J3-202ENST00000443430 IQSEC3Q9UPP2 1182 aaPredicted RBP26.24■■□□□ 1.79
POLR2J3-202ENST00000443430 BTBD19C9JJ37 291 aa26.23■■□□□ 1.79
POLR2J3-202ENST00000443430 ALDH1L1O75891 902 aa26.23■■□□□ 1.79
POLR2J3-202ENST00000443430 CETPP11597 493 aa26.23■■□□□ 1.79
POLR2J3-202ENST00000443430 ERO1BQ86YB8 467 aa26.23■■□□□ 1.79
POLR2J3-202ENST00000443430 IRF6O14896 467 aa26.22■■□□□ 1.79
POLR2J3-202ENST00000443430 WDHD1O75717 1129 aaPredicted RBP26.22■■□□□ 1.79
POLR2J3-202ENST00000443430 LACTBP83111 547 aaPredicted RBP26.22■■□□□ 1.79
POLR2J3-202ENST00000443430 SUCLG2Q96I99 432 aa26.22■■□□□ 1.79
POLR2J3-202ENST00000443430 CHAF1AQ13111 956 aaPredicted RBP26.21■■□□□ 1.79
POLR2J3-202ENST00000443430 KIF22Q14807 665 aa26.21■■□□□ 1.79
POLR2J3-202ENST00000443430 ZKSCAN4Q969J2 545 aaPredicted RBP26.21■■□□□ 1.79
POLR2J3-202ENST00000443430 WRNIP1Q96S55 665 aa26.21■■□□□ 1.79
POLR2J3-202ENST00000443430 SALL2Q9Y467 1007 aaPredicted RBP26.21■■□□□ 1.79
POLR2J3-202ENST00000443430 MROH5Q6ZUA9 1318 aa26.2■■□□□ 1.79
POLR2J3-202ENST00000443430 H0YGN5 161 aa26.2■■□□□ 1.78
POLR2J3-202ENST00000443430 SNAPC2Q13487 334 aa26.2■■□□□ 1.78
POLR2J3-202ENST00000443430 VPS37DQ86XT2 251 aa26.2■■□□□ 1.78
POLR2J3-202ENST00000443430 TBC1D22AQ8WUA7 517 aa26.2■■□□□ 1.78
POLR2J3-202ENST00000443430 TEKT1Q969V4 418 aa26.2■■□□□ 1.78
POLR2J3-202ENST00000443430 SRCIN1Q9C0H9 1055 aa26.2■■□□□ 1.78
POLR2J3-202ENST00000443430 GNRH1P01148 92 aa26.19■■□□□ 1.78
POLR2J3-202ENST00000443430 SLC4A10Q6U841 1118 aa26.19■■□□□ 1.78
POLR2J3-202ENST00000443430 FAM83AQ86UY5 434 aa26.19■■□□□ 1.78
POLR2J3-202ENST00000443430 ZDHHC15Q96MV8 337 aa26.19■■□□□ 1.78
POLR2J3-202ENST00000443430 PPIL2Q13356 520 aa26.18■■□□□ 1.78
POLR2J3-202ENST00000443430 APOBEC3HQ6NTF7 200 aaKnown RBP26.18■■□□□ 1.78
POLR2J3-202ENST00000443430 MRIQ9BWK5 157 aa26.18■■□□□ 1.78
POLR2J3-202ENST00000443430 SPINK5Q9NQ38 1064 aaPredicted RBP26.18■■□□□ 1.78
POLR2J3-202ENST00000443430 NBPF7P0C2Y1 421 aaPredicted RBP26.17■■□□□ 1.78
POLR2J3-202ENST00000443430 PRMT2P55345 433 aa26.17■■□□□ 1.78
POLR2J3-202ENST00000443430 LRRC24Q50LG9 513 aa26.17■■□□□ 1.78
POLR2J3-202ENST00000443430 FKBP1CQ5VVH2 108 aa26.17■■□□□ 1.78
POLR2J3-202ENST00000443430 C17orf99Q6UX52 265 aa26.17■■□□□ 1.78
POLR2J3-202ENST00000443430 TMOD2Q9NZR1 351 aa26.17■■□□□ 1.78
POLR2J3-202ENST00000443430 FRAT2O75474 233 aaPredicted RBP26.16■■□□□ 1.78
POLR2J3-202ENST00000443430 CTGFP29279 349 aa26.16■■□□□ 1.78
POLR2J3-202ENST00000443430 CAVIN4Q5BKX8 364 aa26.16■■□□□ 1.78
POLR2J3-202ENST00000443430 HOOK2Q96ED9 719 aa26.16■■□□□ 1.78
POLR2J3-202ENST00000443430 MTFR1Q15390 333 aa26.15■■□□□ 1.78
POLR2J3-202ENST00000443430 METTL24Q5JXM2 366 aa26.15■■□□□ 1.78
POLR2J3-202ENST00000443430 VGLL2Q8N8G2 317 aa26.15■■□□□ 1.78
POLR2J3-202ENST00000443430 UTYO14607 1347 aa26.14■■□□□ 1.78
POLR2J3-202ENST00000443430 ECM2O94769 699 aaPredicted RBP26.14■■□□□ 1.78
POLR2J3-202ENST00000443430 BCAMP50895 628 aa26.14■■□□□ 1.78
POLR2J3-202ENST00000443430 PPATQ06203 517 aa26.14■■□□□ 1.78
POLR2J3-202ENST00000443430 RABL6Q3YEC7 729 aaPredicted RBP26.14■■□□□ 1.78
POLR2J3-202ENST00000443430 DCAF15Q66K64 600 aa26.14■■□□□ 1.78
POLR2J3-202ENST00000443430 SHISA4Q96DD7 197 aa26.14■■□□□ 1.78
POLR2J3-202ENST00000443430 BICC1Q9H694 974 aaKnown RBP26.14■■□□□ 1.78
POLR2J3-202ENST00000443430 SZT2Q5T011 3432 aa26.13■■□□□ 1.77
POLR2J3-202ENST00000443430 RPAP1Q9BWH6 1393 aaPredicted RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms