RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 RABL6Q3YEC7 729 aaPredicted RBP12.29□□□□□ -0.44
CALD1-210ENST00000443197 GAS2L3Q86XJ1 694 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 CEP57L1Q8IYX8 460 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 KAT14Q9H8E8 782 aa12.29□□□□□ -0.44
CALD1-210ENST00000443197 EPB41L2O43491 1005 aaKnown RBP12.28□□□□□ -0.44
CALD1-210ENST00000443197 ZNF165P49910 485 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 ZNF830Q96NB3 372 aaPredicted RBP12.28□□□□□ -0.44
CALD1-210ENST00000443197 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
CALD1-210ENST00000443197 PRKAB2O43741 272 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 APBA3O96018 575 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 SERPINC1P01008 464 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 DHX8Q14562 1220 aaKnown RBP12.28□□□□□ -0.44
CALD1-210ENST00000443197 ZNF804AQ7Z570 1209 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 SEPT12Q8IYM1 358 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 GTF3C6Q969F1 213 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 DDX19AQ9NUU7 478 aaKnown RBP12.28□□□□□ -0.44
CALD1-210ENST00000443197 MTMR6Q9Y217 621 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 TSPY3P0CV98 308 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 TSPY8P0CW00 308 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 GNAT2P19087 354 aa12.28□□□□□ -0.44
CALD1-210ENST00000443197 PCMTD1Q96MG8 357 aaPredicted RBP12.28□□□□□ -0.44
CALD1-210ENST00000443197 PIH1D3Q9NQM4 214 aaKnown RBP12.28□□□□□ -0.44
CALD1-210ENST00000443197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.27□□□□□ -0.44
CALD1-210ENST00000443197 ADCY5O95622 1261 aa12.27□□□□□ -0.44
CALD1-210ENST00000443197 IFNL3Q8IZI9 196 aa12.27□□□□□ -0.44
CALD1-210ENST00000443197 GPT2Q8TD30 523 aa12.27□□□□□ -0.44
CALD1-210ENST00000443197 THRAP3Q9Y2W1 955 aaKnown RBP12.27□□□□□ -0.44
CALD1-210ENST00000443197 CUL4AQ13619 759 aa12.27□□□□□ -0.45
CALD1-210ENST00000443197 RASGRF1Q13972 1273 aa12.27□□□□□ -0.45
CALD1-210ENST00000443197 KLHL10Q6JEL2 608 aa12.27□□□□□ -0.45
CALD1-210ENST00000443197 TAF6LQ9Y6J9 622 aa12.27□□□□□ -0.45
CALD1-210ENST00000443197 SCRN1Q12765 414 aa12.27□□□□□ -0.45
CALD1-210ENST00000443197 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
CALD1-210ENST00000443197 CPDO75976 1380 aa12.27□□□□□ -0.45
CALD1-210ENST00000443197 A0A1B0GVL5 298 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 HSP90AA4PQ58FG1 418 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 ZNF287Q9HBT7 754 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 INCENPQ9NQS7 918 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 CTDP1Q9Y5B0 961 aaPredicted RBP12.26□□□□□ -0.45
CALD1-210ENST00000443197 USP17L12C9JPN9 530 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 USP17L21D6R901 530 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 TPM3P06753 285 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 RFX5P48382 616 aaPredicted RBP12.26□□□□□ -0.45
CALD1-210ENST00000443197 ERCC4Q92889 916 aaPredicted RBP12.26□□□□□ -0.45
CALD1-210ENST00000443197 DNAJC25Q9H1X3 360 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 TXLNAP40222 546 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 ANO6Q4KMQ2 910 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 CNNM3Q8NE01 707 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 GPR101Q96P66 508 aaPredicted RBP12.26□□□□□ -0.45
CALD1-210ENST00000443197 PATL2C9JE40 543 aaKnown RBP12.26□□□□□ -0.45
CALD1-210ENST00000443197 CYP2E1P05181 493 aaPredicted RBP12.26□□□□□ -0.45
CALD1-210ENST00000443197 ITPK1Q13572 414 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 NKX1-1Q15270 411 aaPredicted RBP12.26□□□□□ -0.45
CALD1-210ENST00000443197 CCDC96Q2M329 555 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 FAM47AQ5JRC9 791 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 ZSCAN30Q86W11 494 aa12.26□□□□□ -0.45
CALD1-210ENST00000443197 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
CALD1-210ENST00000443197 TMTC2Q8N394 836 aa12.25□□□□□ -0.45
CALD1-210ENST00000443197 SPATA31A1Q5TZJ5 1347 aa12.25□□□□□ -0.45
CALD1-210ENST00000443197 PARP3Q9Y6F1 533 aa12.25□□□□□ -0.45
CALD1-210ENST00000443197 SPTLC2O15270 562 aa12.25□□□□□ -0.45
CALD1-210ENST00000443197 TBC1D9BQ66K14 1250 aa12.25□□□□□ -0.45
CALD1-210ENST00000443197 CELF1Q92879 486 aaKnown RBP12.25□□□□□ -0.45
CALD1-210ENST00000443197 OVOS2A0A0G2JMS6 1433 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 PDIA3P30101 505 aaKnown RBP12.24□□□□□ -0.45
CALD1-210ENST00000443197 ADD2P35612 726 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 AKNAD1Q5T1N1 836 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 SEC63Q9UGP8 760 aaKnown RBP12.24□□□□□ -0.45
CALD1-210ENST00000443197 SSBP05455 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
CALD1-210ENST00000443197 DYNLL1P63167 89 aaKnown RBP12.24□□□□□ -0.45
CALD1-210ENST00000443197 CCAR2Q8N163 923 aaKnown RBP12.24□□□□□ -0.45
CALD1-210ENST00000443197 LEO1Q8WVC0 666 aaPredicted RBP12.24□□□□□ -0.45
CALD1-210ENST00000443197 CCDC47Q96A33 483 aaKnown RBP12.24□□□□□ -0.45
CALD1-210ENST00000443197 GGA1Q9UJY5 639 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 CCDC194A0A1B0GVG4 234 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 EIF6P56537 245 aaKnown RBP12.24□□□□□ -0.45
CALD1-210ENST00000443197 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
CALD1-210ENST00000443197 MAPKAPK5Q8IW41 473 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 SLF2Q8IX21 1173 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 KCNJ14Q9UNX9 436 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 AFF2P51816 1311 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 MON2Q7Z3U7 1717 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 ANKRD26Q9UPS8 1709 aa12.24□□□□□ -0.45
CALD1-210ENST00000443197 PIK3C2AO00443 1686 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 EIF5P55010 431 aaKnown RBP12.23□□□□□ -0.45
CALD1-210ENST00000443197 GSTO1P78417 241 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.23□□□□□ -0.45
CALD1-210ENST00000443197 MRPS27Q92552 414 aaKnown RBP12.23□□□□□ -0.45
CALD1-210ENST00000443197 CDK5RAP3Q96JB5 506 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 V9GY48 417 aaPredicted RBP12.23□□□□□ -0.45
CALD1-210ENST00000443197 DCCP43146 1447 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 CYP2D7A0A087X1C5 515 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 SYKP43405 635 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 SPECC1Q5M775 1068 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 TTC6Q86TZ1 520 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 LCORLQ8N3X6 602 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 ANKRD20A12PQ8NF67 263 aa12.23□□□□□ -0.45
CALD1-210ENST00000443197 RBM17Q96I25 401 aaKnown RBP12.23□□□□□ -0.45
CALD1-210ENST00000443197 ZHX3Q9H4I2 956 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms