RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 MYH2Q9UKX2 1941 aa19.61■□□□□ 0.73
USP39-205ENST00000442708 SALL3Q9BXA9 1300 aa19.6■□□□□ 0.73
USP39-205ENST00000442708 WNT10BO00744 389 aa19.6■□□□□ 0.73
USP39-205ENST00000442708 LDHBP07195 334 aaKnown RBP19.6■□□□□ 0.73
USP39-205ENST00000442708 CFAP100Q494V2 611 aa19.6■□□□□ 0.73
USP39-205ENST00000442708 TSHZ3Q63HK5 1081 aa19.6■□□□□ 0.73
USP39-205ENST00000442708 MAP1SQ66K74 1059 aaPredicted RBP19.6■□□□□ 0.73
USP39-205ENST00000442708 CHADLQ6NUI6 762 aa19.6■□□□□ 0.73
USP39-205ENST00000442708 ZNF384Q8TF68 577 aa19.6■□□□□ 0.73
USP39-205ENST00000442708 PIH1D3Q9NQM4 214 aaKnown RBP19.6■□□□□ 0.73
USP39-205ENST00000442708 ABCF2Q9UG63 623 aa19.6■□□□□ 0.73
USP39-205ENST00000442708 SUGT1Q9Y2Z0 365 aa19.6■□□□□ 0.73
USP39-205ENST00000442708 DOCK2Q92608 1830 aa19.6■□□□□ 0.73
USP39-205ENST00000442708 ATP5JP18859 108 aa19.59■□□□□ 0.73
USP39-205ENST00000442708 CRKP46108 304 aa19.59■□□□□ 0.73
USP39-205ENST00000442708 MMP14P50281 582 aa19.59■□□□□ 0.73
USP39-205ENST00000442708 MTMR14Q8NCE2 650 aa19.59■□□□□ 0.73
USP39-205ENST00000442708 ANTXR1Q9H6X2 564 aa19.59■□□□□ 0.73
USP39-205ENST00000442708 SERPINA10Q9UK55 444 aa19.59■□□□□ 0.73
USP39-205ENST00000442708 NUCB1Q02818 461 aa19.58■□□□□ 0.72
USP39-205ENST00000442708 DLGAP5Q15398 846 aa19.58■□□□□ 0.72
USP39-205ENST00000442708 DIXDC1Q155Q3 683 aa19.58■□□□□ 0.72
USP39-205ENST00000442708 SMC1BQ8NDV3 1235 aa19.58■□□□□ 0.72
USP39-205ENST00000442708 EDC3Q96F86 508 aaKnown RBP19.58■□□□□ 0.72
USP39-205ENST00000442708 PRMT6Q96LA8 375 aaPredicted RBP19.58■□□□□ 0.72
USP39-205ENST00000442708 LNPKQ9C0E8 428 aa19.58■□□□□ 0.72
USP39-205ENST00000442708 SCAF8Q9UPN6 1271 aaKnown RBP19.58■□□□□ 0.72
USP39-205ENST00000442708 MAST2Q6P0Q8 1798 aa19.57■□□□□ 0.72
USP39-205ENST00000442708 SPDYE2BA6NHP3 402 aa19.57■□□□□ 0.72
USP39-205ENST00000442708 SPDYE6P0CI01 402 aa19.57■□□□□ 0.72
USP39-205ENST00000442708 DLK2Q6UY11 383 aa19.57■□□□□ 0.72
USP39-205ENST00000442708 ZGPATQ8N5A5 531 aaKnown RBP19.57■□□□□ 0.72
USP39-205ENST00000442708 ZC3H15Q8WU90 426 aaKnown RBP19.57■□□□□ 0.72
USP39-205ENST00000442708 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.57■□□□□ 0.72
USP39-205ENST00000442708 BOLA2Q9H3K6 86 aa19.57■□□□□ 0.72
USP39-205ENST00000442708 ECHDC1Q9NTX5 307 aa19.57■□□□□ 0.72
USP39-205ENST00000442708 GGA3Q9NZ52 723 aa19.57■□□□□ 0.72
USP39-205ENST00000442708 ITGBL1O95965 494 aaPredicted RBP19.56■□□□□ 0.72
USP39-205ENST00000442708 NEFLP07196 543 aa19.56■□□□□ 0.72
USP39-205ENST00000442708 RBM5P52756 815 aaKnown RBP eCLIP19.56■□□□□ 0.72
USP39-205ENST00000442708 HDLBPQ00341 1268 aaKnown RBP19.56■□□□□ 0.72
USP39-205ENST00000442708 MECOMQ03112 1051 aa19.56■□□□□ 0.72
USP39-205ENST00000442708 FMR1Q06787 632 aaKnown RBP eCLIP19.56■□□□□ 0.723e-6■■■□□ 16.1
USP39-205ENST00000442708 ANGEL2Q5VTE6 544 aaKnown RBP19.56■□□□□ 0.72
USP39-205ENST00000442708 ERICH6Q7L0X2 663 aa19.56■□□□□ 0.72
USP39-205ENST00000442708 CHD1LQ86WJ1 897 aa19.56■□□□□ 0.72
USP39-205ENST00000442708 TEKT1Q969V4 418 aa19.56■□□□□ 0.72
USP39-205ENST00000442708 MRIQ9BWK5 157 aa19.56■□□□□ 0.72
USP39-205ENST00000442708 MAST3O60307 1309 aa19.55■□□□□ 0.72
USP39-205ENST00000442708 FSTL1Q12841 308 aa19.55■□□□□ 0.72
USP39-205ENST00000442708 SPTY2D1Q68D10 685 aaPredicted RBP19.55■□□□□ 0.72
USP39-205ENST00000442708 APOBEC3HQ6NTF7 200 aaKnown RBP19.55■□□□□ 0.72
USP39-205ENST00000442708 CNTROBQ8N137 903 aa19.55■□□□□ 0.72
USP39-205ENST00000442708 NSUN4Q96CB9 384 aaKnown RBP19.55■□□□□ 0.72
USP39-205ENST00000442708 ZDHHC15Q96MV8 337 aa19.55■□□□□ 0.72
USP39-205ENST00000442708 DNAJC2Q99543 621 aaKnown RBP19.55■□□□□ 0.72
USP39-205ENST00000442708 HAUS7Q99871 368 aa19.55■□□□□ 0.72
USP39-205ENST00000442708 GLIS2Q9BZE0 524 aaPredicted RBP19.55■□□□□ 0.72
USP39-205ENST00000442708 DAGLAQ9Y4D2 1042 aa19.55■□□□□ 0.72
USP39-205ENST00000442708 TRAF5O00463 557 aa19.54■□□□□ 0.72
USP39-205ENST00000442708 MX1P20591 662 aa19.54■□□□□ 0.72
USP39-205ENST00000442708 HHIPL2Q6UWX4 724 aa19.54■□□□□ 0.72
USP39-205ENST00000442708 DZIP1Q86YF9 867 aaKnown RBP19.54■□□□□ 0.72
USP39-205ENST00000442708 PI4K2BQ8TCG2 481 aa19.54■□□□□ 0.72
USP39-205ENST00000442708 TDRD3Q9H7E2 651 aaKnown RBP19.54■□□□□ 0.72
USP39-205ENST00000442708 RAI14Q9P0K7 980 aa19.54■□□□□ 0.72
USP39-205ENST00000442708 LRP2BPQ9P2M1 347 aa19.54■□□□□ 0.72
USP39-205ENST00000442708 CLRN2A0PK11 232 aa19.53■□□□□ 0.72
USP39-205ENST00000442708 ADM5C9JUS6 153 aa19.53■□□□□ 0.72
USP39-205ENST00000442708 GOLIM4O00461 696 aa19.53■□□□□ 0.72
USP39-205ENST00000442708 USP48Q86UV5 1035 aa19.53■□□□□ 0.72
USP39-205ENST00000442708 ZBTB47Q9UFB7 747 aaPredicted RBP19.53■□□□□ 0.72
USP39-205ENST00000442708 STAP2Q9UGK3 403 aa19.53■□□□□ 0.72
USP39-205ENST00000442708 GAKO14976 1311 aa19.52■□□□□ 0.72
USP39-205ENST00000442708 TTC41PQ6P2S7 1318 aa19.52■□□□□ 0.72
USP39-205ENST00000442708 PASKQ96RG2 1323 aa19.52■□□□□ 0.72
USP39-205ENST00000442708 PDE4AP27815 886 aa19.52■□□□□ 0.72
USP39-205ENST00000442708 DCPSQ96C86 337 aaKnown RBP19.52■□□□□ 0.72
USP39-205ENST00000442708 FAM163AQ96GL9 167 aaPredicted RBP19.52■□□□□ 0.72
USP39-205ENST00000442708 GPATCH3Q96I76 525 aa19.52■□□□□ 0.72
USP39-205ENST00000442708 PAG1Q9NWQ8 432 aa19.52■□□□□ 0.72
USP39-205ENST00000442708 ZNF70Q9UC06 446 aaPredicted RBP19.52■□□□□ 0.72
USP39-205ENST00000442708 PITPNM2Q9BZ72 1349 aa19.51■□□□□ 0.71
USP39-205ENST00000442708 MYH7P12883 1935 aa19.51■□□□□ 0.71
USP39-205ENST00000442708 PDE1AP54750 535 aa19.51■□□□□ 0.71
USP39-205ENST00000442708 SPDYE2Q495Y8 402 aa19.51■□□□□ 0.71
USP39-205ENST00000442708 KRT26Q7Z3Y9 468 aa19.51■□□□□ 0.71
USP39-205ENST00000442708 ADGRA1Q86SQ6 560 aa19.51■□□□□ 0.71
USP39-205ENST00000442708 TRPM7Q96QT4 1865 aa19.51■□□□□ 0.71
USP39-205ENST00000442708 MROH7-TTC4A0A0A0MT08 1334 aa19.51■□□□□ 0.71
USP39-205ENST00000442708 IDH1O75874 414 aaKnown RBP19.5■□□□□ 0.71
USP39-205ENST00000442708 MAP4K4O95819 1239 aaPredicted RBP19.5■□□□□ 0.71
USP39-205ENST00000442708 CACNB3P54284 484 aa19.5■□□□□ 0.71
USP39-205ENST00000442708 CDC42EP5Q6NZY7 148 aa19.5■□□□□ 0.71
USP39-205ENST00000442708 CDC37L1Q7L3B6 337 aa19.5■□□□□ 0.71
USP39-205ENST00000442708 PLEKHM2Q8IWE5 1019 aa19.5■□□□□ 0.71
USP39-205ENST00000442708 CHGBP05060 677 aa19.49■□□□□ 0.71
USP39-205ENST00000442708 TTF1Q15361 905 aaPredicted RBP19.49■□□□□ 0.71
USP39-205ENST00000442708 SLFNL1Q499Z3 407 aa19.49■□□□□ 0.71
USP39-205ENST00000442708 PRAMEF18Q5VWM3 479 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms