RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 PRPF38BQ5VTL8 546 aaKnown RBP10.55□□□□□ -0.72
TOP3B-209ENST00000442653 FAM84BQ96KN1 310 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-209ENST00000442653 TEPSINQ96N21 525 aa10.55□□□□□ -0.72
TOP3B-209ENST00000442653 PTPN18Q99952 460 aa10.55□□□□□ -0.72
TOP3B-209ENST00000442653 SRCIN1Q9C0H9 1055 aa10.55□□□□□ -0.72
TOP3B-209ENST00000442653 TDRD3Q9H7E2 651 aaKnown RBP10.55□□□□□ -0.72
TOP3B-209ENST00000442653 ZNF70Q9UC06 446 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-209ENST00000442653 SERPINA10Q9UK55 444 aa10.55□□□□□ -0.72
TOP3B-209ENST00000442653 RIPOR2Q9Y4F9 1068 aa10.55□□□□□ -0.72
TOP3B-209ENST00000442653 KIAA0100Q14667 2235 aaKnown RBP10.54□□□□□ -0.72
TOP3B-209ENST00000442653 UNCXA6NJT0 531 aa10.54□□□□□ -0.72
TOP3B-209ENST00000442653 ANP32CO43423 234 aa10.54□□□□□ -0.72
TOP3B-209ENST00000442653 IREB2P48200 963 aaKnown RBP10.54□□□□□ -0.72
TOP3B-209ENST00000442653 OTOP1Q7RTM1 612 aa10.54□□□□□ -0.72
TOP3B-209ENST00000442653 DZIP1LQ8IYY4 767 aaKnown RBP10.54□□□□□ -0.72
TOP3B-209ENST00000442653 ANKRD13AQ8IZ07 590 aa10.54□□□□□ -0.72
TOP3B-209ENST00000442653 ANKRD44Q8N8A2 993 aa10.54□□□□□ -0.72
TOP3B-209ENST00000442653 TMEM39BQ9GZU3 492 aa10.54□□□□□ -0.72
TOP3B-209ENST00000442653 BICC1Q9H694 974 aaKnown RBP10.54□□□□□ -0.72
TOP3B-209ENST00000442653 IQSEC3Q9UPP2 1182 aaPredicted RBP10.54□□□□□ -0.72
TOP3B-209ENST00000442653 TRIM17Q9Y577 477 aa10.54□□□□□ -0.72
TOP3B-209ENST00000442653 UTYO14607 1347 aa10.54□□□□□ -0.72
TOP3B-209ENST00000442653 TNFAIP1Q13829 316 aa10.53□□□□□ -0.72
TOP3B-209ENST00000442653 RABL6Q3YEC7 729 aaPredicted RBP10.53□□□□□ -0.72
TOP3B-209ENST00000442653 LRRC24Q50LG9 513 aa10.53□□□□□ -0.72
TOP3B-209ENST00000442653 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.53□□□□□ -0.72
TOP3B-209ENST00000442653 FBXO33Q7Z6M2 555 aa10.53□□□□□ -0.72
TOP3B-209ENST00000442653 FAM9BQ8IZU0 186 aa10.53□□□□□ -0.72
TOP3B-209ENST00000442653 VGLL2Q8N8G2 317 aa10.53□□□□□ -0.72
TOP3B-209ENST00000442653 OPTNQ96CV9 577 aa10.53□□□□□ -0.72
TOP3B-209ENST00000442653 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
TOP3B-209ENST00000442653 ELP3Q9H9T3 547 aa10.53□□□□□ -0.72
TOP3B-209ENST00000442653 ZNF521Q96K83 1311 aa10.53□□□□□ -0.72
TOP3B-209ENST00000442653 TESPA1A2RU30 521 aaPredicted RBP10.52□□□□□ -0.73
TOP3B-209ENST00000442653 POTEFA5A3E0 1075 aa10.52□□□□□ -0.73
TOP3B-209ENST00000442653 TCP10L2B9ZVM9 353 aa10.52□□□□□ -0.73
TOP3B-209ENST00000442653 CRKP46108 304 aa10.52□□□□□ -0.73
TOP3B-209ENST00000442653 CACNB3P54284 484 aa10.52□□□□□ -0.73
TOP3B-209ENST00000442653 VGLL4Q14135 290 aa10.52□□□□□ -0.73
TOP3B-209ENST00000442653 KLHDC4Q8TBB5 520 aa10.52□□□□□ -0.73
TOP3B-209ENST00000442653 CD99L2Q8TCZ2 262 aa10.52□□□□□ -0.73
TOP3B-209ENST00000442653 MROH5Q6ZUA9 1318 aa10.52□□□□□ -0.73
TOP3B-209ENST00000442653 CHAF1AQ13111 956 aaPredicted RBP10.51□□□□□ -0.73
TOP3B-209ENST00000442653 MRPL50Q8N5N7 158 aaKnown RBP10.51□□□□□ -0.73
TOP3B-209ENST00000442653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.51□□□□□ -0.73
TOP3B-209ENST00000442653 BRI3BPQ8WY22 251 aa10.51□□□□□ -0.73
TOP3B-209ENST00000442653 PTPN22Q9Y2R2 807 aa10.51□□□□□ -0.73
TOP3B-209ENST00000442653 CEP290O15078 2479 aa10.51□□□□□ -0.73
TOP3B-209ENST00000442653 RANBP2P49792 3224 aaKnown RBP10.51□□□□□ -0.73
TOP3B-209ENST00000442653 ABCB7O75027 752 aa10.5□□□□□ -0.73
TOP3B-209ENST00000442653 PDE8BO95263 885 aa10.5□□□□□ -0.73
TOP3B-209ENST00000442653 BCAMP50895 628 aa10.5□□□□□ -0.73
TOP3B-209ENST00000442653 SP3Q02447 781 aa10.5□□□□□ -0.73
TOP3B-209ENST00000442653 POLA2Q14181 598 aa10.5□□□□□ -0.73
TOP3B-209ENST00000442653 METTL24Q5JXM2 366 aa10.5□□□□□ -0.73
TOP3B-209ENST00000442653 OTUD7BQ6GQQ9 843 aa10.5□□□□□ -0.73
TOP3B-209ENST00000442653 VPS37DQ86XT2 251 aa10.5□□□□□ -0.73
TOP3B-209ENST00000442653 OTUD5Q96G74 571 aa10.5□□□□□ -0.73
TOP3B-209ENST00000442653 ERO1AQ96HE7 468 aa10.5□□□□□ -0.73
TOP3B-209ENST00000442653 CCL15-CCL14A0A0B4J2E2 113 aa10.49□□□□□ -0.73
TOP3B-209ENST00000442653 MAP3K9P80192 1104 aa10.49□□□□□ -0.73
TOP3B-209ENST00000442653 HDLBPQ00341 1268 aaKnown RBP10.49□□□□□ -0.73
TOP3B-209ENST00000442653 CCL15Q16663 113 aa10.49□□□□□ -0.73
TOP3B-209ENST00000442653 APOBEC3HQ6NTF7 200 aaKnown RBP10.49□□□□□ -0.73
TOP3B-209ENST00000442653 FAM43AQ8N2R8 423 aa10.49□□□□□ -0.73
TOP3B-209ENST00000442653 TEKT1Q969V4 418 aa10.49□□□□□ -0.73
TOP3B-209ENST00000442653 ARMC5Q96C12 935 aa10.49□□□□□ -0.73
TOP3B-209ENST00000442653 ZDHHC15Q96MV8 337 aa10.49□□□□□ -0.73
TOP3B-209ENST00000442653 USP44Q9H0E7 712 aa10.49□□□□□ -0.73
TOP3B-209ENST00000442653 EFCC1Q9HA90 598 aa10.49□□□□□ -0.73
TOP3B-209ENST00000442653 RBBP6Q7Z6E9 1792 aaKnown RBP10.49□□□□□ -0.73
TOP3B-209ENST00000442653 ZNF316A6NFI3 1004 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-209ENST00000442653 SPDYE5A6NIY4 337 aa10.48□□□□□ -0.73
TOP3B-209ENST00000442653 FRAT2O75474 233 aaPredicted RBP10.48□□□□□ -0.73
TOP3B-209ENST00000442653 FGFR2P21802 821 aa10.48□□□□□ -0.73
TOP3B-209ENST00000442653 TNNI2P48788 182 aa10.48□□□□□ -0.73
TOP3B-209ENST00000442653 CAVIN4Q5BKX8 364 aa10.48□□□□□ -0.73
TOP3B-209ENST00000442653 INTS3Q68E01 1043 aaKnown RBP10.48□□□□□ -0.73
TOP3B-209ENST00000442653 TBC1D22AQ8WUA7 517 aa10.48□□□□□ -0.73
TOP3B-209ENST00000442653 SSH1Q8WYL5 1049 aa10.48□□□□□ -0.73
TOP3B-209ENST00000442653 CSADQ9Y600 493 aa10.48□□□□□ -0.73
TOP3B-209ENST00000442653 SNCAIPQ9Y6H5 919 aa10.48□□□□□ -0.73
TOP3B-209ENST00000442653 PTPRCP08575 1304 aa10.48□□□□□ -0.73
TOP3B-209ENST00000442653 ZSWIM8A7E2V4 1837 aa10.47□□□□□ -0.73
TOP3B-209ENST00000442653 EN2P19622 333 aaPredicted RBP10.47□□□□□ -0.73
TOP3B-209ENST00000442653 RFX5P48382 616 aaPredicted RBP10.47□□□□□ -0.73
TOP3B-209ENST00000442653 GTF2A2P52657 109 aa10.47□□□□□ -0.73
TOP3B-209ENST00000442653 PUM3Q15397 648 aaKnown RBP10.47□□□□□ -0.73
TOP3B-209ENST00000442653 TAF1CQ15572 869 aaPredicted RBP10.47□□□□□ -0.73
TOP3B-209ENST00000442653 ZKSCAN4Q969J2 545 aaPredicted RBP10.47□□□□□ -0.73
TOP3B-209ENST00000442653 WRNIP1Q96S55 665 aa10.47□□□□□ -0.73
TOP3B-209ENST00000442653 PCDH10Q9P2E7 1040 aa10.47□□□□□ -0.73
TOP3B-209ENST00000442653 KIF16BQ96L93 1317 aa10.47□□□□□ -0.73
TOP3B-209ENST00000442653 SZT2Q5T011 3432 aa10.46□□□□□ -0.73
TOP3B-209ENST00000442653 IRF6O14896 467 aa10.46□□□□□ -0.73
TOP3B-209ENST00000442653 FKBP1CQ5VVH2 108 aa10.46□□□□□ -0.73
TOP3B-209ENST00000442653 ATG9AQ7Z3C6 839 aa10.46□□□□□ -0.73
TOP3B-209ENST00000442653 FAM83AQ86UY5 434 aa10.46□□□□□ -0.73
TOP3B-209ENST00000442653 ZNF333Q96JL9 665 aa10.46□□□□□ -0.73
TOP3B-209ENST00000442653 MRIQ9BWK5 157 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms