RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 RFX7Q2KHR2 1363 aa16.36■□□□□ 0.21
MCF2L-218ENST00000442625 NBPF26B4DH59 902 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 KIF28PB7ZC32 967 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 CABP4P57796 275 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 NCAPHQ15003 741 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 NBPF14Q5TI25 921 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 NBPF10Q6P3W6 841 aaKnown RBP16.35■□□□□ 0.21
MCF2L-218ENST00000442625 NBPF15Q8N660 670 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 PLBD2Q8NHP8 589 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-218ENST00000442625 ZBTB3Q9H5J0 574 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 CCDC93Q567U6 631 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 OSBP2Q969R2 916 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 AIFM3Q96NN9 605 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
MCF2L-218ENST00000442625 L2HGDHQ9H9P8 463 aa16.35■□□□□ 0.21
MCF2L-218ENST00000442625 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
MCF2L-218ENST00000442625 A0A1B0GUL7 405 aa16.34■□□□□ 0.21
MCF2L-218ENST00000442625 TMEM232C9JQI7 657 aa16.34■□□□□ 0.21
MCF2L-218ENST00000442625 ZNF202O95125 648 aa16.34■□□□□ 0.21
MCF2L-218ENST00000442625 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
MCF2L-218ENST00000442625 PLA2G4AP47712 749 aa16.34■□□□□ 0.21
MCF2L-218ENST00000442625 ADALQ6DHV7 355 aa16.34■□□□□ 0.21
MCF2L-218ENST00000442625 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
MCF2L-218ENST00000442625 ZCCHC17Q9NP64 241 aaKnown RBP16.34■□□□□ 0.21
MCF2L-218ENST00000442625 LAMA4Q16363 1823 aa16.34■□□□□ 0.21
MCF2L-218ENST00000442625 URI1O94763 535 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-218ENST00000442625 PNMA6AP0CW24 399 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-218ENST00000442625 IRX5P78411 483 aaPredicted RBP16.34■□□□□ 0.21
MCF2L-218ENST00000442625 UTP14AQ9BVJ6 771 aaKnown RBP16.34■□□□□ 0.21
MCF2L-218ENST00000442625 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.21
MCF2L-218ENST00000442625 FANCCQ00597 558 aa16.33■□□□□ 0.21
MCF2L-218ENST00000442625 DCAF5Q96JK2 942 aa16.33■□□□□ 0.21
MCF2L-218ENST00000442625 MROH7-TTC4A0A0A0MT08 1334 aa16.33■□□□□ 0.2
MCF2L-218ENST00000442625 SPTLC2O15270 562 aa16.33■□□□□ 0.2
MCF2L-218ENST00000442625 WDHD1O75717 1129 aaPredicted RBP16.33■□□□□ 0.2
MCF2L-218ENST00000442625 WASHC4Q2M389 1173 aa16.33■□□□□ 0.2
MCF2L-218ENST00000442625 CARD6Q9BX69 1037 aa16.33■□□□□ 0.2
MCF2L-218ENST00000442625 HSD3B7Q9H2F3 369 aa16.33■□□□□ 0.2
MCF2L-218ENST00000442625 RTEL1Q9NZ71 1219 aa16.33■□□□□ 0.2
MCF2L-218ENST00000442625 DENND2AQ9ULE3 1009 aa16.33■□□□□ 0.2
MCF2L-218ENST00000442625 H7C1W4 665 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 RXRAP19793 462 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 C8orf76Q96K31 380 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 A1BGP04217 495 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 PFKFB1P16118 471 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 ADORA1P30542 326 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 BMS1Q14692 1282 aaKnown RBP16.32■□□□□ 0.2
MCF2L-218ENST00000442625 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 ZNF274Q96GC6 653 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-218ENST00000442625 PRDM16Q9HAZ2 1276 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 AFDNP55196 1824 aaKnown RBP16.32■□□□□ 0.2
MCF2L-218ENST00000442625 MYH15Q9Y2K3 1946 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 PI16Q6UXB8 463 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 NEK11Q8NG66 645 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 CWC25Q9NXE8 425 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-218ENST00000442625 IMPACTQ9P2X3 320 aa16.32■□□□□ 0.2
MCF2L-218ENST00000442625 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
MCF2L-218ENST00000442625 FOXP2O15409 715 aa16.31■□□□□ 0.2
MCF2L-218ENST00000442625 PNOCQ13519 176 aa16.31■□□□□ 0.2
MCF2L-218ENST00000442625 CCDC150Q8NCX0 1101 aa16.31■□□□□ 0.2
MCF2L-218ENST00000442625 NKX2-3Q8TAU0 364 aa16.31■□□□□ 0.2
MCF2L-218ENST00000442625 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-218ENST00000442625 ZNF330Q9Y3S2 320 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-218ENST00000442625 KLF18A0A0U1RQI7 1052 aa16.31■□□□□ 0.2
MCF2L-218ENST00000442625 GOLGA8BA8MQT2 603 aa16.31■□□□□ 0.2
MCF2L-218ENST00000442625 EYA2O00167 538 aa16.31■□□□□ 0.2
MCF2L-218ENST00000442625 IL15P40933 162 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-218ENST00000442625 ETF1P62495 437 aaKnown RBP16.31■□□□□ 0.2
MCF2L-218ENST00000442625 TRIM65Q6PJ69 517 aa16.31■□□□□ 0.2
MCF2L-218ENST00000442625 PROSER2Q86WR7 435 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-218ENST00000442625 UBXN4Q92575 508 aa16.31■□□□□ 0.2
MCF2L-218ENST00000442625 SERPINC1P01008 464 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 GYS2P54840 703 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 NLRP12P59046 1061 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 CFAP100Q494V2 611 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 MYSM1Q5VVJ2 828 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 TAF3Q5VWG9 929 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 CCDC34Q96HJ3 373 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 CAMTA1Q9Y6Y1 1673 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 HNRNPH2P55795 449 aaKnown RBP16.3■□□□□ 0.2
MCF2L-218ENST00000442625 UBASH3AP57075 661 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 SCARF1Q14162 830 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 CLIC6Q96NY7 704 aa16.3■□□□□ 0.2
MCF2L-218ENST00000442625 PSDA5PKW4 1024 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-218ENST00000442625 UBE2Q2LH0YL09 131 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 PRC1O43663 620 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 ST5P78524 1137 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 SPECC1Q5M775 1068 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 MNS1Q8NEH6 495 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 TIGD1Q96MW7 591 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 KCND1Q9NSA2 647 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 SCN11AQ9UI33 1791 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 CCDC66A2RUB6 948 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 KIF2AO00139 706 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-218ENST00000442625 FGAP02671 866 aa16.29■□□□□ 0.2
MCF2L-218ENST00000442625 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
MCF2L-218ENST00000442625 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms