RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TM6SF1Q9BZW5 370 aa9.62□□□□□ -0.87
CCDC39-201ENST00000442201 WDR66Q8TBY9 1149 aa9.61□□□□□ -0.87
CCDC39-201ENST00000442201 JAKMIP1Q96N16 626 aaKnown RBP9.61□□□□□ -0.87
CCDC39-201ENST00000442201 RNF216Q9NWF9 866 aaPredicted RBP9.61□□□□□ -0.87
CCDC39-201ENST00000442201 CTNNA3Q9UI47 895 aa9.61□□□□□ -0.87
CCDC39-201ENST00000442201 ZBTB7AO95365 584 aa9.61□□□□□ -0.87
CCDC39-201ENST00000442201 PSMA5P28066 241 aa9.61□□□□□ -0.87
CCDC39-201ENST00000442201 MCM2P49736 904 aa9.61□□□□□ -0.87
CCDC39-201ENST00000442201 KRT32Q14532 448 aa9.61□□□□□ -0.87
CCDC39-201ENST00000442201 ZGPATQ8N5A5 531 aaKnown RBP9.61□□□□□ -0.87
CCDC39-201ENST00000442201 CD209Q9NNX6 404 aa9.61□□□□□ -0.87
CCDC39-201ENST00000442201 C10orf71Q711Q0 1435 aa9.61□□□□□ -0.87
CCDC39-201ENST00000442201 CYP7A1P22680 504 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 POLD1P28340 1107 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 TSGA10IPQ3SY00 556 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 SPTY2D1Q68D10 685 aaPredicted RBP9.6□□□□□ -0.87
CCDC39-201ENST00000442201 SECISBP2LQ93073 1101 aaKnown RBP9.6□□□□□ -0.87
CCDC39-201ENST00000442201 ZC3H12CQ9C0D7 883 aaKnown RBP9.6□□□□□ -0.87
CCDC39-201ENST00000442201 MTFR1LQ9H019 292 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 IGSF3O75054 1194 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 CASTP20810 708 aaKnown RBP9.6□□□□□ -0.87
CCDC39-201ENST00000442201 R3HDM1Q15032 1099 aaKnown RBP9.6□□□□□ -0.87
CCDC39-201ENST00000442201 ADCK5Q3MIX3 580 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 NAA16Q6N069 864 aaPredicted RBP9.6□□□□□ -0.87
CCDC39-201ENST00000442201 OLFM4Q6UX06 510 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 KIF20AO95235 890 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 MBD4O95243 580 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 CYP21A2P08686 494 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 IL1R1P14778 569 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 TMED8Q6PL24 325 aaPredicted RBP9.6□□□□□ -0.87
CCDC39-201ENST00000442201 STRBPQ96SI9 672 aaKnown RBP9.6□□□□□ -0.87
CCDC39-201ENST00000442201 EYA3Q99504 573 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 ZSWIM6Q9HCJ5 1215 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 CYP46A1Q9Y6A2 500 aa9.6□□□□□ -0.87
CCDC39-201ENST00000442201 SALL1Q9NSC2 1324 aa9.59□□□□□ -0.87
CCDC39-201ENST00000442201 CC2D2BQ6DHV5 1058 aa9.59□□□□□ -0.87
CCDC39-201ENST00000442201 MTERF4Q7Z6M4 381 aaKnown RBP9.59□□□□□ -0.87
CCDC39-201ENST00000442201 JAG2Q9Y219 1238 aa9.59□□□□□ -0.87
CCDC39-201ENST00000442201 ATF5Q9Y2D1 282 aaPredicted RBP9.59□□□□□ -0.87
CCDC39-201ENST00000442201 RIMBP2O15034 1052 aa9.59□□□□□ -0.87
CCDC39-201ENST00000442201 FGAP02671 866 aa9.59□□□□□ -0.87
CCDC39-201ENST00000442201 APPP05067 770 aa9.59□□□□□ -0.87
CCDC39-201ENST00000442201 PRDX5P30044 214 aa9.59□□□□□ -0.87
CCDC39-201ENST00000442201 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
CCDC39-201ENST00000442201 COA1Q9GZY4 146 aa9.59□□□□□ -0.87
CCDC39-201ENST00000442201 COL11A2P13942 1736 aaPredicted RBP9.59□□□□□ -0.87
CCDC39-201ENST00000442201 LRRC37AA6NMS7 1700 aa9.59□□□□□ -0.88
CCDC39-201ENST00000442201 FOXP2O15409 715 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 GNAT2P19087 354 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 IMMTQ16891 758 aaKnown RBP9.58□□□□□ -0.88
CCDC39-201ENST00000442201 BLOC1S2Q6QNY1 142 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 MIGA1Q8NAN2 632 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 NSUN4Q96CB9 384 aaKnown RBP9.58□□□□□ -0.88
CCDC39-201ENST00000442201 SLKQ9H2G2 1235 aaPredicted RBP9.58□□□□□ -0.88
CCDC39-201ENST00000442201 ARMT1Q9H993 441 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
CCDC39-201ENST00000442201 TAF6LQ9Y6J9 622 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 RPAP1Q9BWH6 1393 aaPredicted RBP9.58□□□□□ -0.88
CCDC39-201ENST00000442201 LDHBP07195 334 aaKnown RBP9.58□□□□□ -0.88
CCDC39-201ENST00000442201 XRCC6P12956 609 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCDC39-201ENST00000442201 MECOMQ03112 1051 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 TTLL5Q6EMB2 1281 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 RUFY3Q7L099 469 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 DZIP1Q86YF9 867 aaKnown RBP9.58□□□□□ -0.88
CCDC39-201ENST00000442201 TTLL6Q8N841 843 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 MAGEB6P1A0A0J9YX57 407 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 G3V3G9 751 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 DCAF8Q5TAQ9 597 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 TTC14Q96N46 770 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 NEK1Q96PY6 1258 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 PDRG1Q9NUG6 133 aa9.58□□□□□ -0.88
CCDC39-201ENST00000442201 PATL2C9JE40 543 aaKnown RBP9.57□□□□□ -0.88
CCDC39-201ENST00000442201 CPA1P15085 419 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 LCORLQ8N3X6 602 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 TBC1D22AQ8WUA7 517 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 C7orf43Q8WVR3 580 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 NACAP1Q9BZK3 213 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 ZHX1Q9UKY1 873 aaPredicted RBP9.57□□□□□ -0.88
CCDC39-201ENST00000442201 A0A0G2JLW4 131 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 ESPNB1AK53 854 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 ZNF213O14771 459 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 DPEP1P16444 411 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 ZSCAN20P17040 1043 aaPredicted RBP9.57□□□□□ -0.88
CCDC39-201ENST00000442201 ALX1Q15699 326 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 ADGRA1Q86SQ6 560 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 ZNF384Q8TF68 577 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 SLC4A4Q9Y6R1 1079 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 HMGB1P09429 215 aaKnown RBP9.57□□□□□ -0.88
CCDC39-201ENST00000442201 AK2P54819 239 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 GSTO1P78417 241 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 GRIPAP1Q4V328 841 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 NOL8Q76FK4 1167 aaKnown RBP9.57□□□□□ -0.88
CCDC39-201ENST00000442201 TMX3Q96JJ7 454 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 NAPBQ9H115 298 aa9.57□□□□□ -0.88
CCDC39-201ENST00000442201 FAM205AQ6ZU69 1335 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 DOCK2Q92608 1830 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 RPS6KB1P23443 525 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 HAND2P61296 217 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 TGFB2P61812 414 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms