RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 SYT17Q9BSW7 474 aa19.07■□□□□ 0.64
MCF2L-217ENST00000441756 LSG1Q9H089 658 aaKnown RBP19.07■□□□□ 0.64
MCF2L-217ENST00000441756 ZNF277Q9NRM2 450 aaPredicted RBP19.07■□□□□ 0.64
MCF2L-217ENST00000441756 MYO5AQ9Y4I1 1855 aaKnown RBP19.07■□□□□ 0.64
MCF2L-217ENST00000441756 USP17L3A6NCW0 530 aa19.06■□□□□ 0.64
MCF2L-217ENST00000441756 USP17L4A6NCW7 530 aa19.06■□□□□ 0.64
MCF2L-217ENST00000441756 GNAT2P19087 354 aa19.06■□□□□ 0.64
MCF2L-217ENST00000441756 PRDX5P30044 214 aa19.06■□□□□ 0.64
MCF2L-217ENST00000441756 MECOMQ03112 1051 aa19.06■□□□□ 0.64
MCF2L-217ENST00000441756 USP17L1Q7RTZ2 530 aa19.06■□□□□ 0.64
MCF2L-217ENST00000441756 ZNF589Q86UQ0 364 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-217ENST00000441756 NSUN4Q96CB9 384 aaKnown RBP19.06■□□□□ 0.64
MCF2L-217ENST00000441756 NOL10Q9BSC4 688 aaKnown RBP19.06■□□□□ 0.64
MCF2L-217ENST00000441756 DSCC1Q9BVC3 393 aa19.06■□□□□ 0.64
MCF2L-217ENST00000441756 IL25Q9H293 177 aa19.06■□□□□ 0.64
MCF2L-217ENST00000441756 JAG2Q9Y219 1238 aa19.06■□□□□ 0.64
MCF2L-217ENST00000441756 M0R2C6 588 aa19.05■□□□□ 0.64
MCF2L-217ENST00000441756 NFKBIEO00221 500 aa19.05■□□□□ 0.64
MCF2L-217ENST00000441756 GPAA1O43292 621 aa19.05■□□□□ 0.64
MCF2L-217ENST00000441756 JDP2Q8WYK2 163 aa19.05■□□□□ 0.64
MCF2L-217ENST00000441756 SEC62Q99442 399 aaKnown RBP19.05■□□□□ 0.64
MCF2L-217ENST00000441756 RBM19Q9Y4C8 960 aaKnown RBP19.05■□□□□ 0.64
MCF2L-217ENST00000441756 U3KPZ7 1027 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-217ENST00000441756 MYO3BQ8WXR4 1341 aa19.04■□□□□ 0.64
MCF2L-217ENST00000441756 ANP32AP39687 249 aaKnown RBP19.04■□□□□ 0.64
MCF2L-217ENST00000441756 RNF20Q5VTR2 975 aa19.04■□□□□ 0.64
MCF2L-217ENST00000441756 MAP4K1Q92918 833 aa19.04■□□□□ 0.64
MCF2L-217ENST00000441756 PUS7LQ9H0K6 701 aaKnown RBP19.04■□□□□ 0.64
MCF2L-217ENST00000441756 RPAP1Q9BWH6 1393 aaPredicted RBP19.04■□□□□ 0.64
MCF2L-217ENST00000441756 PSME4Q14997 1843 aa19.03■□□□□ 0.64
MCF2L-217ENST00000441756 MAGEB6P1A0A0J9YX57 407 aa19.03■□□□□ 0.64
MCF2L-217ENST00000441756 MBD4O95243 580 aa19.03■□□□□ 0.64
MCF2L-217ENST00000441756 CHGBP05060 677 aa19.03■□□□□ 0.64
MCF2L-217ENST00000441756 ANAPC15P60006 121 aa19.03■□□□□ 0.64
MCF2L-217ENST00000441756 CCDC129Q6ZRS4 1044 aa19.03■□□□□ 0.64
MCF2L-217ENST00000441756 ZNRF3Q9ULT6 936 aa19.03■□□□□ 0.64
MCF2L-217ENST00000441756 BAG3O95817 575 aa19.02■□□□□ 0.64
MCF2L-217ENST00000441756 SLFNL1Q499Z3 407 aa19.02■□□□□ 0.64
MCF2L-217ENST00000441756 CTNNA3Q9UI47 895 aa19.02■□□□□ 0.64
MCF2L-217ENST00000441756 RBM8AQ9Y5S9 174 aaKnown RBP19.02■□□□□ 0.64
MCF2L-217ENST00000441756 CHD4Q14839 1912 aa19.02■□□□□ 0.63
MCF2L-217ENST00000441756 MROH7-TTC4A0A0A0MT08 1334 aa19.01■□□□□ 0.63
MCF2L-217ENST00000441756 HSPD1P10809 573 aaKnown RBP19.01■□□□□ 0.63
MCF2L-217ENST00000441756 ZKSCAN1P17029 563 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-217ENST00000441756 HSPA4P34932 840 aa19.01■□□□□ 0.63
MCF2L-217ENST00000441756 PTH1RQ03431 593 aa19.01■□□□□ 0.63
MCF2L-217ENST00000441756 DACT2Q5SW24 774 aa19.01■□□□□ 0.63
MCF2L-217ENST00000441756 NACAP1Q9BZK3 213 aa19.01■□□□□ 0.63
MCF2L-217ENST00000441756 ZMYM6O95789 1325 aa19■□□□□ 0.63
MCF2L-217ENST00000441756 PLCG2P16885 1265 aa19■□□□□ 0.63
MCF2L-217ENST00000441756 MIGA1Q8NAN2 632 aa19■□□□□ 0.63
MCF2L-217ENST00000441756 IL27Q8NEV9 243 aa19■□□□□ 0.63
MCF2L-217ENST00000441756 STRBPQ96SI9 672 aaKnown RBP19■□□□□ 0.63
MCF2L-217ENST00000441756 CRNKL1Q9BZJ0 848 aaKnown RBP19■□□□□ 0.63
MCF2L-217ENST00000441756 SRCAPQ6ZRS2 3230 aa19■□□□□ 0.63
MCF2L-217ENST00000441756 ZNF646O15015 1829 aaPredicted RBP19■□□□□ 0.63
MCF2L-217ENST00000441756 YDJCA8MPS7 323 aa18.99■□□□□ 0.63
MCF2L-217ENST00000441756 HDLBPQ00341 1268 aaKnown RBP18.99■□□□□ 0.63
MCF2L-217ENST00000441756 RASSF7Q02833 373 aa18.99■□□□□ 0.63
MCF2L-217ENST00000441756 TNIP1Q15025 636 aa18.99■□□□□ 0.63
MCF2L-217ENST00000441756 ARHGAP27Q6ZUM4 889 aa18.99■□□□□ 0.63
MCF2L-217ENST00000441756 ZNF384Q8TF68 577 aa18.99■□□□□ 0.63
MCF2L-217ENST00000441756 FAM163AQ96GL9 167 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-217ENST00000441756 DDRGK1Q96HY6 314 aa18.99■□□□□ 0.63
MCF2L-217ENST00000441756 ARMT1Q9H993 441 aa18.99■□□□□ 0.63
MCF2L-217ENST00000441756 TTF2Q9UNY4 1162 aaKnown RBP18.99■□□□□ 0.63
MCF2L-217ENST00000441756 SCN9AQ15858 1988 aa18.99■□□□□ 0.63
MCF2L-217ENST00000441756 APPP05067 770 aa18.98■□□□□ 0.63
MCF2L-217ENST00000441756 ADGRA1Q86SQ6 560 aa18.98■□□□□ 0.63
MCF2L-217ENST00000441756 LCORLQ8N3X6 602 aa18.98■□□□□ 0.63
MCF2L-217ENST00000441756 CERS5Q8N5B7 392 aa18.98■□□□□ 0.63
MCF2L-217ENST00000441756 TEKT1Q969V4 418 aa18.98■□□□□ 0.63
MCF2L-217ENST00000441756 RIOK1Q9BRS2 568 aaKnown RBP18.98■□□□□ 0.63
MCF2L-217ENST00000441756 MRIQ9BWK5 157 aa18.98■□□□□ 0.63
MCF2L-217ENST00000441756 SLC4A4Q9Y6R1 1079 aa18.98■□□□□ 0.63
MCF2L-217ENST00000441756 COL4A5P29400 1685 aa18.98■□□□□ 0.63
MCF2L-217ENST00000441756 GAKO14976 1311 aa18.98■□□□□ 0.63
MCF2L-217ENST00000441756 PATL2C9JE40 543 aaKnown RBP18.97■□□□□ 0.63
MCF2L-217ENST00000441756 VIL1P09327 827 aaKnown RBP18.97■□□□□ 0.63
MCF2L-217ENST00000441756 LMNB1P20700 586 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 MMP14P50281 582 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 EIF6P56537 245 aaKnown RBP18.97■□□□□ 0.63
MCF2L-217ENST00000441756 PPP4CP60510 307 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 KRT32Q14532 448 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 NECTIN1Q15223 517 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 DIXDC1Q155Q3 683 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 ALX1Q15699 326 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 GRIK5Q16478 980 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 CIAPIN1Q6FI81 312 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 RSBN1LQ6PCB5 846 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-217ENST00000441756 HHIPL2Q6UWX4 724 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 MYH2Q9UKX2 1941 aa18.97■□□□□ 0.63
MCF2L-217ENST00000441756 RABEP1Q15276 862 aa18.96■□□□□ 0.63
MCF2L-217ENST00000441756 IMMTQ16891 758 aaKnown RBP18.96■□□□□ 0.63
MCF2L-217ENST00000441756 VPS53Q5VIR6 699 aa18.96■□□□□ 0.63
MCF2L-217ENST00000441756 CREB3L3Q68CJ9 461 aa18.96■□□□□ 0.63
MCF2L-217ENST00000441756 GIMAP6Q6P9H5 292 aa18.96■□□□□ 0.63
MCF2L-217ENST00000441756 AGBL3Q8NEM8 1001 aa18.96■□□□□ 0.63
MCF2L-217ENST00000441756 IL17RAQ96F46 866 aa18.96■□□□□ 0.63
MCF2L-217ENST00000441756 NAPBQ9H115 298 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms