RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 C17orf99Q6UX52 265 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 ANKRD18AQ8IVF6 992 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 CNKSR2Q8WXI2 1034 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 ZBED3Q96IU2 234 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-210ENST00000441703 SEC31BQ9NQW1 1179 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 OTOFQ9HC10 1997 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 VCANP13611 3396 aa8.2□□□□□ -1.1
HDAC6-210ENST00000441703 SPTBN5Q9NRC6 3674 aaKnown RBP8.19□□□□□ -1.1
HDAC6-210ENST00000441703 ADCY3O60266 1144 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 FOSL2P15408 326 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 CTGFP29279 349 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 MAP3K9P80192 1104 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 SNAPC2Q13487 334 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 TNFAIP1Q13829 316 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 CNGB1Q14028 1251 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-210ENST00000441703 VGLL4Q14135 290 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 RASA3Q14644 834 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 GSE1Q14687 1217 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 CCDC152Q4G0S7 254 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 GLIPR1L2Q4G1C9 344 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 DIS3LQ8TF46 1054 aaKnown RBP8.19□□□□□ -1.1
HDAC6-210ENST00000441703 PKNOX2Q96KN3 472 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
HDAC6-210ENST00000441703 TAOK2Q9UL54 1235 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 HCN4Q9Y3Q4 1203 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 ADGRA2Q96PE1 1338 aa8.19□□□□□ -1.1
HDAC6-210ENST00000441703 RBM5P52756 815 aaKnown RBP eCLIP8.18□□□□□ -1.1
HDAC6-210ENST00000441703 GTF2IP78347 998 aa8.18□□□□□ -1.1
HDAC6-210ENST00000441703 CFAP100Q494V2 611 aa8.18□□□□□ -1.1
HDAC6-210ENST00000441703 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-210ENST00000441703 ANKLE1Q8NAG6 615 aa8.18□□□□□ -1.1
HDAC6-210ENST00000441703 MYLIPQ8WY64 445 aa8.18□□□□□ -1.1
HDAC6-210ENST00000441703 DDRGK1Q96HY6 314 aa8.18□□□□□ -1.1
HDAC6-210ENST00000441703 CCDC85AQ96PX6 553 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-210ENST00000441703 NBPF3Q9H094 633 aa8.18□□□□□ -1.1
HDAC6-210ENST00000441703 C11orf49Q9H6J7 331 aa8.18□□□□□ -1.1
HDAC6-210ENST00000441703 SPDYE5A6NIY4 337 aa8.17□□□□□ -1.1
HDAC6-210ENST00000441703 F8W031 263 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-210ENST00000441703 ATP5J2-PTCD1G3V325 749 aa8.17□□□□□ -1.1
HDAC6-210ENST00000441703 EIF5BO60841 1220 aaKnown RBP8.17□□□□□ -1.1
HDAC6-210ENST00000441703 ELNP15502 786 aa8.17□□□□□ -1.1
HDAC6-210ENST00000441703 MDM2Q00987 491 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-210ENST00000441703 MTMR14Q8NCE2 650 aa8.17□□□□□ -1.1
HDAC6-210ENST00000441703 SNX27Q96L92 541 aa8.17□□□□□ -1.1
HDAC6-210ENST00000441703 CRISPLD2Q9H0B8 497 aa8.17□□□□□ -1.1
HDAC6-210ENST00000441703 TSPYL4Q9UJ04 414 aa8.17□□□□□ -1.1
HDAC6-210ENST00000441703 GABRQQ9UN88 632 aa8.17□□□□□ -1.1
HDAC6-210ENST00000441703 SPDYE2BA6NHP3 402 aa8.16□□□□□ -1.1
HDAC6-210ENST00000441703 CACNA1AO00555 2505 aa8.16□□□□□ -1.1
HDAC6-210ENST00000441703 SPDYE6P0CI01 402 aa8.16□□□□□ -1.1
HDAC6-210ENST00000441703 CCT4P50991 539 aaKnown RBP8.16□□□□□ -1.1
HDAC6-210ENST00000441703 ERO1BQ86YB8 467 aa8.16□□□□□ -1.1
HDAC6-210ENST00000441703 PLBD2Q8NHP8 589 aa8.16□□□□□ -1.1
HDAC6-210ENST00000441703 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC6-210ENST00000441703 PXYLP1Q8TE99 480 aa8.16□□□□□ -1.1
HDAC6-210ENST00000441703 SYNGAP1Q96PV0 1343 aa8.16□□□□□ -1.1
HDAC6-210ENST00000441703 CDC5LQ99459 802 aaKnown RBP8.16□□□□□ -1.1
HDAC6-210ENST00000441703 LBHD1Q9BQE6 289 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-210ENST00000441703 ISCA1Q9BUE6 129 aa8.16□□□□□ -1.1
HDAC6-210ENST00000441703 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC6-210ENST00000441703 SEMA6BQ9H3T3 888 aa8.16□□□□□ -1.1
HDAC6-210ENST00000441703 PAK6Q9NQU5 681 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-210ENST00000441703 MYH3P11055 1940 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 SPEF2Q9C093 1822 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 PDHXO00330 501 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 TNNI2P48788 182 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 FLT3LGP49771 235 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 PPIL2Q13356 520 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 NFE2L2Q16236 605 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 ANKRD23Q86SG2 305 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 PRMT6Q96LA8 375 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-210ENST00000441703 PARK7Q99497 189 aaKnown RBP8.15□□□□□ -1.1
HDAC6-210ENST00000441703 C1QTNF1Q9BXJ1 281 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 PRKRIP1Q9H875 184 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-210ENST00000441703 BABAM1Q9NWV8 329 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 PCDHAC2Q9Y5I4 1007 aa8.15□□□□□ -1.1
HDAC6-210ENST00000441703 TNPO2O14787 897 aaKnown RBP8.14□□□□□ -1.11
HDAC6-210ENST00000441703 IRF6O14896 467 aa8.14□□□□□ -1.11
HDAC6-210ENST00000441703 PDE8AO60658 829 aa8.14□□□□□ -1.11
HDAC6-210ENST00000441703 PPP2R1AP30153 589 aa8.14□□□□□ -1.11
HDAC6-210ENST00000441703 KCNJ4P48050 445 aa8.14□□□□□ -1.11
HDAC6-210ENST00000441703 ZBTB38Q8NAP3 1195 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-210ENST00000441703 WRNIP1Q96S55 665 aa8.14□□□□□ -1.11
HDAC6-210ENST00000441703 PLEKHF1Q96S99 279 aa8.14□□□□□ -1.11
HDAC6-210ENST00000441703 BACH2Q9BYV9 841 aa8.14□□□□□ -1.11
HDAC6-210ENST00000441703 LEMD3Q9Y2U8 911 aa8.14□□□□□ -1.11
HDAC6-210ENST00000441703 ARIH1Q9Y4X5 557 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-210ENST00000441703 TTC28Q96AY4 2481 aa8.14□□□□□ -1.11
HDAC6-210ENST00000441703 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-210ENST00000441703 MGAMO43451 1857 aa8.13□□□□□ -1.11
HDAC6-210ENST00000441703 DDX60LQ5H9U9 1706 aaKnown RBP8.13□□□□□ -1.11
HDAC6-210ENST00000441703 TCP10L2B9ZVM9 353 aa8.13□□□□□ -1.11
HDAC6-210ENST00000441703 PDE4AP27815 886 aa8.13□□□□□ -1.11
HDAC6-210ENST00000441703 TRIM28Q13263 835 aaKnown RBP8.13□□□□□ -1.11
HDAC6-210ENST00000441703 IRF5Q13568 498 aa8.13□□□□□ -1.11
HDAC6-210ENST00000441703 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-210ENST00000441703 UHRF1Q96T88 793 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-210ENST00000441703 ZNF70Q9UC06 446 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-210ENST00000441703 PRKAG2Q9UGJ0 569 aa8.13□□□□□ -1.11
HDAC6-210ENST00000441703 BRPF3Q9ULD4 1205 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms