RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 DDX54Q8TDD1 881 aaKnown RBP15.71■□□□□ 0.11
LINC02048-201ENST00000440556 NBPF4Q96M43 638 aa15.71■□□□□ 0.11
LINC02048-201ENST00000440556 TUBE1Q9UJT0 475 aa15.71■□□□□ 0.11
LINC02048-201ENST00000440556 N4BP1O75113 896 aaKnown RBP15.7■□□□□ 0.1
LINC02048-201ENST00000440556 RNF40O75150 1001 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 NDUFA8P51970 172 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 GBP6Q6ZN66 633 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 GIMAP7Q8NHV1 300 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 CTAGE15A4D2H0 777 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 PPP1R12AO14974 1030 aaPredicted RBP15.7■□□□□ 0.1
LINC02048-201ENST00000440556 CTAGE8P0CG41 777 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 HSP90AB3PQ58FF7 597 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 Q6ZUG5 572 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 CTAGE6Q86UF2 777 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 CTAGE4Q8IX94 777 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 NSUN7Q8NE18 718 aaKnown RBP15.7■□□□□ 0.1
LINC02048-201ENST00000440556 FMNL2Q96PY5 1086 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 PANX2Q96RD6 677 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 PNKPQ96T60 521 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 HSD3B7Q9H2F3 369 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 GNL3LQ9NVN8 582 aaKnown RBP15.7■□□□□ 0.1
LINC02048-201ENST00000440556 POLR3EQ9NVU0 708 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 MYO1AQ9UBC5 1043 aa15.7■□□□□ 0.1
LINC02048-201ENST00000440556 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
LINC02048-201ENST00000440556 A0A087WWV3 80 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 A0A1B0GVL5 298 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 SHTN1A0MZ66 631 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 EXOC5O00471 708 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 PRPF6O94906 941 aaKnown RBP15.69■□□□□ 0.1
LINC02048-201ENST00000440556 ZNF202O95125 648 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 ERCC3P19447 782 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 CMA1P23946 247 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 LTKP29376 864 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 INPP5BP32019 993 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 STK38Q15208 465 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 WAPLQ7Z5K2 1190 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 PRPF38AQ8NAV1 312 aaKnown RBP15.69■□□□□ 0.1
LINC02048-201ENST00000440556 LINC00301Q8NCQ3 95 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 SMARCC1Q92922 1105 aaPredicted RBP15.69■□□□□ 0.1
LINC02048-201ENST00000440556 FBXW7Q969H0 707 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 CABS1Q96KC9 395 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 RAI14Q9P0K7 980 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 FAM169AQ9Y6X4 670 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 RFX7Q2KHR2 1363 aa15.69■□□□□ 0.1
LINC02048-201ENST00000440556 CTAGE9A4FU28 777 aa15.68■□□□□ 0.1
LINC02048-201ENST00000440556 AMPHP49418 695 aa15.68■□□□□ 0.1
LINC02048-201ENST00000440556 SCRN1Q12765 414 aa15.68■□□□□ 0.1
LINC02048-201ENST00000440556 RRS1Q15050 365 aaKnown RBP15.68■□□□□ 0.1
LINC02048-201ENST00000440556 SPECC1LQ69YQ0 1117 aa15.68■□□□□ 0.1
LINC02048-201ENST00000440556 FAM227BQ96M60 508 aa15.68■□□□□ 0.1
LINC02048-201ENST00000440556 NEDD4P46934 1319 aa15.68■□□□□ 0.1
LINC02048-201ENST00000440556 NEDD9Q14511 834 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 B4GALNT4Q76KP1 1039 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 BRAPQ7Z569 592 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 TC2NQ8N9U0 490 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 TBC1D22AQ8WUA7 517 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 UBR1Q8IWV7 1749 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 CDHR2Q9BYE9 1310 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 PTPDC1A2A3K4 754 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 SPTLC2O15270 562 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 ATP1A3P13637 1013 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 TOGARAM2Q6ZUX3 1019 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 AMOTL1Q8IY63 956 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 ELOA2Q8IYF1 753 aaPredicted RBP15.67■□□□□ 0.1
LINC02048-201ENST00000440556 DPF2Q92785 391 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 TCEANC2Q96MN5 208 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 C19orf44Q9H6X5 657 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 MIS18AQ9NYP9 233 aa15.67■□□□□ 0.1
LINC02048-201ENST00000440556 NRXN3Q9Y4C0 1643 aa15.66■□□□□ 0.1
LINC02048-201ENST00000440556 TMEM2Q9UHN6 1383 aa15.66■□□□□ 0.1
LINC02048-201ENST00000440556 TAF5LO75529 589 aa15.66■□□□□ 0.1
LINC02048-201ENST00000440556 SYF2O95926 243 aaKnown RBP15.66■□□□□ 0.1
LINC02048-201ENST00000440556 RDXP35241 583 aaKnown RBP15.66■□□□□ 0.1
LINC02048-201ENST00000440556 LIG3P49916 1009 aa15.66■□□□□ 0.1
LINC02048-201ENST00000440556 VSNL1P62760 191 aa15.66■□□□□ 0.1
LINC02048-201ENST00000440556 PPFIA1Q13136 1202 aa15.66■□□□□ 0.1
LINC02048-201ENST00000440556 CCDC148Q8NFR7 591 aa15.66■□□□□ 0.1
LINC02048-201ENST00000440556 FAM76AQ8TAV0 307 aa15.66■□□□□ 0.1
LINC02048-201ENST00000440556 KAT2BQ92831 832 aa15.66■□□□□ 0.1
LINC02048-201ENST00000440556 PUF60Q9UHX1 559 aaKnown RBP15.66■□□□□ 0.1
LINC02048-201ENST00000440556 SALL1Q9NSC2 1324 aa15.66■□□□□ 0.1
LINC02048-201ENST00000440556 CCDC189A1A4V9 331 aa15.65■□□□□ 0.1
LINC02048-201ENST00000440556 CHUKO15111 745 aa15.65■□□□□ 0.1
LINC02048-201ENST00000440556 LRCH2Q5VUJ6 765 aa15.65■□□□□ 0.1
LINC02048-201ENST00000440556 PDILTQ8N807 584 aa15.65■□□□□ 0.1
LINC02048-201ENST00000440556 FSD1Q9BTV5 496 aa15.65■□□□□ 0.1
LINC02048-201ENST00000440556 FTOQ9C0B1 505 aaKnown RBP eCLIP15.65■□□□□ 0.1
LINC02048-201ENST00000440556 DACH1Q9UI36 760 aa15.65■□□□□ 0.1
LINC02048-201ENST00000440556 TTF2Q9UNY4 1162 aaKnown RBP15.65■□□□□ 0.1
LINC02048-201ENST00000440556 NCAPD2Q15021 1401 aa15.65■□□□□ 0.1
LINC02048-201ENST00000440556 TARSL2A2RTX5 802 aaKnown RBP15.64■□□□□ 0.1
LINC02048-201ENST00000440556 LRRIQ3A6PVS8 624 aaPredicted RBP15.64■□□□□ 0.1
LINC02048-201ENST00000440556 BIN1O00499 593 aa15.64■□□□□ 0.1
LINC02048-201ENST00000440556 FSBPO95073 299 aa15.64■□□□□ 0.1
LINC02048-201ENST00000440556 KCNV1Q6PIU1 500 aa15.64■□□□□ 0.1
LINC02048-201ENST00000440556 ZNF274Q96GC6 653 aaPredicted RBP15.64■□□□□ 0.1
LINC02048-201ENST00000440556 RPGRIP1Q96KN7 1286 aa15.64■□□□□ 0.1
LINC02048-201ENST00000440556 CEMIPQ8WUJ3 1361 aa15.64■□□□□ 0.09
LINC02048-201ENST00000440556 A0A0D9SFI3 127 aa15.64■□□□□ 0.09
LINC02048-201ENST00000440556 GPTP24298 496 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms