RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 TAF1CQ15572 869 aaPredicted RBP26.15■■□□□ 1.78
TRIM39-210ENST00000440271 ZFYVE28Q9HCC9 887 aa26.15■■□□□ 1.78
TRIM39-210ENST00000440271 CCL15-CCL14A0A0B4J2E2 113 aa26.14■■□□□ 1.78
TRIM39-210ENST00000440271 TCP10L2B9ZVM9 353 aa26.14■■□□□ 1.78
TRIM39-210ENST00000440271 GTF2A2P52657 109 aa26.14■■□□□ 1.78
TRIM39-210ENST00000440271 VGLL4Q14135 290 aa26.14■■□□□ 1.78
TRIM39-210ENST00000440271 UBE4AQ14139 1066 aa26.14■■□□□ 1.78
TRIM39-210ENST00000440271 CCL15Q16663 113 aa26.14■■□□□ 1.78
TRIM39-210ENST00000440271 FAM84BQ96KN1 310 aaPredicted RBP26.14■■□□□ 1.78
TRIM39-210ENST00000440271 TMEM39BQ9GZU3 492 aa26.14■■□□□ 1.78
TRIM39-210ENST00000440271 GRM8O00222 908 aa26.13■■□□□ 1.77
TRIM39-210ENST00000440271 NCBP3Q53F19 620 aaKnown RBP26.13■■□□□ 1.77
TRIM39-210ENST00000440271 NBPF11Q86T75 865 aa26.13■■□□□ 1.77
TRIM39-210ENST00000440271 PTCH2Q9Y6C5 1203 aa26.13■■□□□ 1.77
TRIM39-210ENST00000440271 CACNA1FO60840 1977 aa26.13■■□□□ 1.77
TRIM39-210ENST00000440271 OTOFQ9HC10 1997 aa26.13■■□□□ 1.77
TRIM39-210ENST00000440271 CRKP46108 304 aa26.12■■□□□ 1.77
TRIM39-210ENST00000440271 TNNI2P48788 182 aa26.12■■□□□ 1.77
TRIM39-210ENST00000440271 EXOSC9Q06265 439 aaKnown RBP26.12■■□□□ 1.77
TRIM39-210ENST00000440271 SLC9C1Q4G0N8 1177 aa26.12■■□□□ 1.77
TRIM39-210ENST00000440271 FAM43AQ8N2R8 423 aa26.12■■□□□ 1.77
TRIM39-210ENST00000440271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.12■■□□□ 1.77
TRIM39-210ENST00000440271 OTUD5Q96G74 571 aa26.11■■□□□ 1.77
TRIM39-210ENST00000440271 CSADQ9Y600 493 aa26.11■■□□□ 1.77
TRIM39-210ENST00000440271 FXR1P51114 621 aaKnown RBP eCLIP26.1■■□□□ 1.77
TRIM39-210ENST00000440271 PUS3Q9BZE2 481 aaKnown RBP26.1■■□□□ 1.77
TRIM39-210ENST00000440271 C9orf78Q9NZ63 289 aaPredicted RBP26.1■■□□□ 1.77
TRIM39-210ENST00000440271 SLC4A8Q2Y0W8 1093 aa26.09■■□□□ 1.77
TRIM39-210ENST00000440271 GRIK5Q16478 980 aa26.08■■□□□ 1.77
TRIM39-210ENST00000440271 WDR63Q8IWG1 891 aa26.08■■□□□ 1.77
TRIM39-210ENST00000440271 BRCA2P51587 3418 aa26.08■■□□□ 1.77
TRIM39-210ENST00000440271 SPDYE5A6NIY4 337 aa26.07■■□□□ 1.76
TRIM39-210ENST00000440271 WDHD1O75717 1129 aaPredicted RBP26.06■■□□□ 1.76
TRIM39-210ENST00000440271 MYCP01106 439 aaPredicted RBP26.06■■□□□ 1.76
TRIM39-210ENST00000440271 COLQQ9Y215 455 aaPredicted RBP26.06■■□□□ 1.76
TRIM39-210ENST00000440271 SALL2Q9Y467 1007 aaPredicted RBP26.06■■□□□ 1.76
TRIM39-210ENST00000440271 RIPOR2Q9Y4F9 1068 aa26.06■■□□□ 1.76
TRIM39-210ENST00000440271 TLR2O60603 784 aa26.05■■□□□ 1.76
TRIM39-210ENST00000440271 ALDH1L1O75891 902 aa26.05■■□□□ 1.76
TRIM39-210ENST00000440271 CETPP11597 493 aa26.05■■□□□ 1.76
TRIM39-210ENST00000440271 HDLBPQ00341 1268 aaKnown RBP26.05■■□□□ 1.76
TRIM39-210ENST00000440271 FBXO33Q7Z6M2 555 aa26.05■■□□□ 1.76
TRIM39-210ENST00000440271 VPS37DQ86XT2 251 aa26.05■■□□□ 1.76
TRIM39-210ENST00000440271 ARHGAP39Q9C0H5 1083 aa26.05■■□□□ 1.76
TRIM39-210ENST00000440271 IQSEC3Q9UPP2 1182 aaPredicted RBP26.05■■□□□ 1.76
TRIM39-210ENST00000440271 CACNB3P54284 484 aa26.04■■□□□ 1.76
TRIM39-210ENST00000440271 KIF22Q14807 665 aa26.04■■□□□ 1.76
TRIM39-210ENST00000440271 ERO1BQ86YB8 467 aa26.04■■□□□ 1.76
TRIM39-210ENST00000440271 KAZALD1Q96I82 304 aa26.04■■□□□ 1.76
TRIM39-210ENST00000440271 SUCLG2Q96I99 432 aa26.04■■□□□ 1.76
TRIM39-210ENST00000440271 SNCAIPQ9Y6H5 919 aa26.04■■□□□ 1.76
TRIM39-210ENST00000440271 MROH5Q6ZUA9 1318 aa26.04■■□□□ 1.76
TRIM39-210ENST00000440271 BTBD19C9JJ37 291 aa26.03■■□□□ 1.76
TRIM39-210ENST00000440271 LACTBP83111 547 aaPredicted RBP26.03■■□□□ 1.76
TRIM39-210ENST00000440271 CHAF1AQ13111 956 aaPredicted RBP26.03■■□□□ 1.76
TRIM39-210ENST00000440271 SLC4A10Q6U841 1118 aa26.03■■□□□ 1.76
TRIM39-210ENST00000440271 SH3TC2Q8TF17 1288 aa26.03■■□□□ 1.76
TRIM39-210ENST00000440271 SRCIN1Q9C0H9 1055 aa26.03■■□□□ 1.76
TRIM39-210ENST00000440271 ZCCHC17Q9NP64 241 aaKnown RBP26.03■■□□□ 1.76
TRIM39-210ENST00000440271 ARAP2Q8WZ64 1704 aa26.02■■□□□ 1.76
TRIM39-210ENST00000440271 IRF6O14896 467 aa26.02■■□□□ 1.76
TRIM39-210ENST00000440271 TBC1D22AQ8WUA7 517 aa26.02■■□□□ 1.76
TRIM39-210ENST00000440271 ZKSCAN4Q969J2 545 aaPredicted RBP26.02■■□□□ 1.76
TRIM39-210ENST00000440271 TEKT1Q969V4 418 aa26.02■■□□□ 1.76
TRIM39-210ENST00000440271 WRNIP1Q96S55 665 aa26.02■■□□□ 1.76
TRIM39-210ENST00000440271 FRAT2O75474 233 aaPredicted RBP26.01■■□□□ 1.75
TRIM39-210ENST00000440271 GNRH1P01148 92 aa26.01■■□□□ 1.75
TRIM39-210ENST00000440271 SNAPC2Q13487 334 aa26.01■■□□□ 1.75
TRIM39-210ENST00000440271 CAVIN4Q5BKX8 364 aa26■■□□□ 1.75
TRIM39-210ENST00000440271 FAM83AQ86UY5 434 aa26■■□□□ 1.75
TRIM39-210ENST00000440271 ZDHHC15Q96MV8 337 aa26■■□□□ 1.75
TRIM39-210ENST00000440271 MRIQ9BWK5 157 aa26■■□□□ 1.75
TRIM39-210ENST00000440271 SPINK5Q9NQ38 1064 aaPredicted RBP26■■□□□ 1.75
TRIM39-210ENST00000440271 TMOD2Q9NZR1 351 aa26■■□□□ 1.75
TRIM39-210ENST00000440271 H0YGN5 161 aa25.99■■□□□ 1.75
TRIM39-210ENST00000440271 NBPF7P0C2Y1 421 aaPredicted RBP25.99■■□□□ 1.75
TRIM39-210ENST00000440271 HOOK2Q96ED9 719 aa25.99■■□□□ 1.75
TRIM39-210ENST00000440271 PRMT2P55345 433 aa25.98■■□□□ 1.75
TRIM39-210ENST00000440271 PPIL2Q13356 520 aa25.98■■□□□ 1.75
TRIM39-210ENST00000440271 LRRC24Q50LG9 513 aa25.98■■□□□ 1.75
TRIM39-210ENST00000440271 FKBP1CQ5VVH2 108 aa25.98■■□□□ 1.75
TRIM39-210ENST00000440271 APOBEC3HQ6NTF7 200 aaKnown RBP25.98■■□□□ 1.75
TRIM39-210ENST00000440271 METTL24Q5JXM2 366 aa25.97■■□□□ 1.75
TRIM39-210ENST00000440271 UTYO14607 1347 aa25.96■■□□□ 1.75
TRIM39-210ENST00000440271 BCAMP50895 628 aa25.96■■□□□ 1.75
TRIM39-210ENST00000440271 DCAF15Q66K64 600 aa25.96■■□□□ 1.75
TRIM39-210ENST00000440271 C17orf99Q6UX52 265 aa25.96■■□□□ 1.75
TRIM39-210ENST00000440271 BICC1Q9H694 974 aaKnown RBP25.96■■□□□ 1.75
TRIM39-210ENST00000440271 ZSWIM8A7E2V4 1837 aa25.95■■□□□ 1.75
TRIM39-210ENST00000440271 CEP290O15078 2479 aa25.95■■□□□ 1.75
TRIM39-210ENST00000440271 ECM2O94769 699 aaPredicted RBP25.95■■□□□ 1.74
TRIM39-210ENST00000440271 PDE8BO95263 885 aa25.95■■□□□ 1.74
TRIM39-210ENST00000440271 PPATQ06203 517 aa25.95■■□□□ 1.74
TRIM39-210ENST00000440271 RABL6Q3YEC7 729 aaPredicted RBP25.95■■□□□ 1.74
TRIM39-210ENST00000440271 MIGA2Q7L4E1 593 aa25.95■■□□□ 1.74
TRIM39-210ENST00000440271 VGLL2Q8N8G2 317 aa25.95■■□□□ 1.74
TRIM39-210ENST00000440271 CTGFP29279 349 aa25.94■■□□□ 1.74
TRIM39-210ENST00000440271 HHIPL2Q6UWX4 724 aa25.94■■□□□ 1.74
TRIM39-210ENST00000440271 ZNF341Q9BYN7 854 aa25.94■■□□□ 1.74
TRIM39-210ENST00000440271 MRS2Q9HD23 443 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms