RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
SMPD4-209ENST00000439886 RAI14Q9P0K7 980 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 PARP3Q9Y6F1 533 aa13.4□□□□□ -0.26
SMPD4-209ENST00000439886 METP08581 1390 aa13.4□□□□□ -0.27
SMPD4-209ENST00000439886 IFT172Q9UG01 1749 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 ZRANB2O95218 330 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMPD4-209ENST00000439886 ACTN2P35609 894 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 EIF4A1P60842 406 aaKnown RBP13.39□□□□□ -0.27
SMPD4-209ENST00000439886 MTF1Q14872 753 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 STOX1Q6ZVD7 989 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 RPAINQ86UA6 219 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 PPFIBP1Q86W92 1011 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 ENGASEQ8NFI3 743 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 FBXO18Q8NFZ0 1043 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 KCNG4Q8TDN1 519 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 PHLPP2Q6ZVD8 1323 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 PPARDQ03181 441 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 CCDC93Q567U6 631 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 UBE3BQ7Z3V4 1068 aa13.39□□□□□ -0.27
SMPD4-209ENST00000439886 KIF5CO60282 957 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 PFKFB2O60825 505 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
SMPD4-209ENST00000439886 KSR2Q6VAB6 950 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 LRRC59Q96AG4 307 aaKnown RBP13.38□□□□□ -0.27
SMPD4-209ENST00000439886 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
SMPD4-209ENST00000439886 AIFM3Q96NN9 605 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 CTDNEP1O95476 244 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 TIMM10P62072 90 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 SLC39A6Q13433 755 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 NFXL1Q6ZNB6 911 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 SRLQ86TD4 932 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 A0A1B0GUL7 405 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 ARHGAP6O43182 974 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 LINC00301Q8NCQ3 95 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 MPHOSPH8Q99549 860 aa13.38□□□□□ -0.27
SMPD4-209ENST00000439886 COBLO75128 1261 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 FKBP15Q5T1M5 1219 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 TRIM65Q6PJ69 517 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 DBNLQ9UJU6 430 aaKnown RBP13.37□□□□□ -0.27
SMPD4-209ENST00000439886 FLT4P35916 1363 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 PDIA3P30101 505 aaKnown RBP13.37□□□□□ -0.27
SMPD4-209ENST00000439886 TRIM29Q14134 588 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 ANO1Q5XXA6 986 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 VWA3AA6NCI4 1184 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 MAP2K2P36507 400 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 HDXQ7Z353 690 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 REXO1L1PQ8IX06 675 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 ANKRD20A12PQ8NF67 263 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 FAM53CQ9NYF3 392 aa13.37□□□□□ -0.27
SMPD4-209ENST00000439886 ADCY9O60503 1353 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 E7EWF7 191 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
SMPD4-209ENST00000439886 ATP6V1AP38606 617 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
SMPD4-209ENST00000439886 MYSM1Q5VVJ2 828 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 ABCB6Q9NP58 842 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 HOOK1Q9UJC3 728 aaKnown RBP13.36□□□□□ -0.27
SMPD4-209ENST00000439886 NFE2L3Q9Y4A8 694 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 SOWAHDA6NJG2 315 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 H0YHG0 523 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 IVLP07476 585 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 HMGB1P09429 215 aaKnown RBP13.36□□□□□ -0.27
SMPD4-209ENST00000439886 TXLNAP40222 546 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 SARNPP82979 210 aaKnown RBP13.36□□□□□ -0.27
SMPD4-209ENST00000439886 FUT8Q9BYC5 575 aa13.36□□□□□ -0.27
SMPD4-209ENST00000439886 SETD1BQ9UPS6 1966 aaKnown RBP13.36□□□□□ -0.27
SMPD4-209ENST00000439886 CCDC102BQ68D86 513 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 MICU3Q86XE3 530 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 EXOC4Q96A65 974 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 FOXN1O15353 648 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 KIF1CO43896 1103 aaKnown RBP13.35□□□□□ -0.27
SMPD4-209ENST00000439886 ZMYND10O75800 440 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 CCDC175P0C221 793 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 HOXC9P31274 260 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 GRAMD1CQ8IYS0 662 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 RABGGTAQ92696 567 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 CAPZA3Q96KX2 299 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 LLPHQ9BRT6 129 aaKnown RBP13.35□□□□□ -0.27
SMPD4-209ENST00000439886 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 ALDH1L1O75891 902 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 TUBB4AP04350 444 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 MNAT1P51948 309 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 TRDNQ13061 729 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 KCNB2Q92953 911 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 PHKBQ93100 1093 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
SMPD4-209ENST00000439886 PCDHA5Q9Y5H7 936 aa13.35□□□□□ -0.27
SMPD4-209ENST00000439886 EPHA10Q5JZY3 1008 aa13.34□□□□□ -0.27
SMPD4-209ENST00000439886 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
SMPD4-209ENST00000439886 ACBD3Q9H3P7 528 aa13.34□□□□□ -0.27
SMPD4-209ENST00000439886 RTEL1Q9NZ71 1219 aa13.34□□□□□ -0.27
SMPD4-209ENST00000439886 CARMIL3Q8ND23 1372 aa13.34□□□□□ -0.27
SMPD4-209ENST00000439886 EIF3CLB5ME19 914 aaKnown RBP13.34□□□□□ -0.27
SMPD4-209ENST00000439886 FANCGO15287 622 aa13.34□□□□□ -0.27
SMPD4-209ENST00000439886 DHX8Q14562 1220 aaKnown RBP13.34□□□□□ -0.27
SMPD4-209ENST00000439886 TNNI3KQ59H18 835 aa13.34□□□□□ -0.27
SMPD4-209ENST00000439886 JMYQ8N9B5 988 aa13.34□□□□□ -0.27
SMPD4-209ENST00000439886 CAGE1Q8TC20 777 aa13.34□□□□□ -0.27
SMPD4-209ENST00000439886 SMARCC1Q92922 1105 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-209ENST00000439886 EIF3CQ99613 913 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms