RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 TM4SF4P48230 202 aa20.29■□□□□ 0.84
SNRPD3-204ENST00000439775 MRIQ9BWK5 157 aa20.29■□□□□ 0.84
SNRPD3-204ENST00000439775 MCOLN1Q9GZU1 580 aa20.29■□□□□ 0.84
SNRPD3-204ENST00000439775 SIL1Q9H173 461 aa20.29■□□□□ 0.84
SNRPD3-204ENST00000439775 TDRD3Q9H7E2 651 aaKnown RBP20.29■□□□□ 0.84
SNRPD3-204ENST00000439775 MAST3O60307 1309 aa20.28■□□□□ 0.84
SNRPD3-204ENST00000439775 CASP8AP2Q9UKL3 1982 aa20.28■□□□□ 0.84
SNRPD3-204ENST00000439775 GNAI3P08754 354 aa20.28■□□□□ 0.84
SNRPD3-204ENST00000439775 IL15P40933 162 aaPredicted RBP20.28■□□□□ 0.84
SNRPD3-204ENST00000439775 SREBF2Q12772 1141 aa20.28■□□□□ 0.84
SNRPD3-204ENST00000439775 NBPF12Q5TAG4 269 aaPredicted RBP20.28■□□□□ 0.84
SNRPD3-204ENST00000439775 TEKT1Q969V4 418 aa20.28■□□□□ 0.84
SNRPD3-204ENST00000439775 COPRSQ9NQ92 184 aa20.28■□□□□ 0.84
SNRPD3-204ENST00000439775 FZD1Q9UP38 647 aa20.28■□□□□ 0.84
SNRPD3-204ENST00000439775 TRIM27P14373 513 aa20.27■□□□□ 0.84
SNRPD3-204ENST00000439775 DGKZQ13574 1117 aa20.27■□□□□ 0.84
SNRPD3-204ENST00000439775 ATP2B3Q16720 1220 aa20.27■□□□□ 0.84
SNRPD3-204ENST00000439775 SPRYD7Q5W111 196 aa20.27■□□□□ 0.84
SNRPD3-204ENST00000439775 ATF7IPQ6VMQ6 1270 aa20.27■□□□□ 0.84
SNRPD3-204ENST00000439775 MIER1Q8N108 512 aa20.27■□□□□ 0.84
SNRPD3-204ENST00000439775 CEP126Q9P2H0 1117 aa20.27■□□□□ 0.84
SNRPD3-204ENST00000439775 ZBTB48P10074 688 aaPredicted RBP20.26■□□□□ 0.83
SNRPD3-204ENST00000439775 IREB2P48200 963 aaKnown RBP20.26■□□□□ 0.83
SNRPD3-204ENST00000439775 MKRN3Q13064 507 aaKnown RBP20.26■□□□□ 0.83
SNRPD3-204ENST00000439775 MTX1Q13505 466 aa20.26■□□□□ 0.83
SNRPD3-204ENST00000439775 DIEXFQ68CQ4 756 aaKnown RBP20.26■□□□□ 0.83
SNRPD3-204ENST00000439775 WDR66Q8TBY9 1149 aa20.26■□□□□ 0.83
SNRPD3-204ENST00000439775 ZDHHC15Q96MV8 337 aa20.26■□□□□ 0.83
SNRPD3-204ENST00000439775 TEPSINQ96N21 525 aa20.26■□□□□ 0.83
SNRPD3-204ENST00000439775 LAMB1P07942 1786 aa20.26■□□□□ 0.83
SNRPD3-204ENST00000439775 ZBTB22O15209 634 aa20.25■□□□□ 0.83
SNRPD3-204ENST00000439775 TNNI2P48788 182 aa20.25■□□□□ 0.83
SNRPD3-204ENST00000439775 SLC10A4Q96EP9 437 aa20.25■□□□□ 0.83
SNRPD3-204ENST00000439775 CFHR5Q9BXR6 569 aa20.25■□□□□ 0.83
SNRPD3-204ENST00000439775 PA2G4Q9UQ80 394 aaKnown RBP20.25■□□□□ 0.83
SNRPD3-204ENST00000439775 TCP10L2B9ZVM9 353 aa20.24■□□□□ 0.83
SNRPD3-204ENST00000439775 USP2O75604 605 aaPredicted RBP20.24■□□□□ 0.83
SNRPD3-204ENST00000439775 BCAR3O75815 825 aa20.24■□□□□ 0.83
SNRPD3-204ENST00000439775 NOM1Q5C9Z4 860 aaKnown RBP20.24■□□□□ 0.83
SNRPD3-204ENST00000439775 HHIPL2Q6UWX4 724 aa20.24■□□□□ 0.83
SNRPD3-204ENST00000439775 CLMNQ96JQ2 1002 aa20.24■□□□□ 0.83
SNRPD3-204ENST00000439775 MYH13Q9UKX3 1938 aa20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 MANSC4A6NHS7 340 aaPredicted RBP20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 SEMA3EO15041 775 aa20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 INHBEP58166 350 aa20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 FKBP1CQ5VVH2 108 aa20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 APOBEC3HQ6NTF7 200 aaKnown RBP20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 ANKRD13AQ8IZ07 590 aa20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 FRAT1Q92837 279 aaPredicted RBP20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 WNK4Q96J92 1243 aa20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 TMEM39BQ9GZU3 492 aa20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 GNL3LQ9NVN8 582 aaKnown RBP20.23■□□□□ 0.83
SNRPD3-204ENST00000439775 SRGAP3O43295 1099 aa20.22■□□□□ 0.83
SNRPD3-204ENST00000439775 TMOD2Q9NZR1 351 aa20.22■□□□□ 0.83
SNRPD3-204ENST00000439775 SALL1Q9NSC2 1324 aa20.22■□□□□ 0.83
SNRPD3-204ENST00000439775 RPAP1Q9BWH6 1393 aaPredicted RBP20.21■□□□□ 0.83
SNRPD3-204ENST00000439775 OTOFQ9HC10 1997 aa20.21■□□□□ 0.83
SNRPD3-204ENST00000439775 TBC1D8O95759 1140 aa20.21■□□□□ 0.83
SNRPD3-204ENST00000439775 ALDH1A1P00352 501 aa20.21■□□□□ 0.83
SNRPD3-204ENST00000439775 FAM83AQ86UY5 434 aa20.21■□□□□ 0.83
SNRPD3-204ENST00000439775 CDAN1Q8IWY9 1227 aa20.21■□□□□ 0.83
SNRPD3-204ENST00000439775 CCDC85CA6NKD9 419 aa20.2■□□□□ 0.82
SNRPD3-204ENST00000439775 PHKA1P46020 1223 aa20.2■□□□□ 0.82
SNRPD3-204ENST00000439775 CTU1Q7Z7A3 348 aaKnown RBP20.2■□□□□ 0.82
SNRPD3-204ENST00000439775 DENND2AQ9ULE3 1009 aa20.2■□□□□ 0.82
SNRPD3-204ENST00000439775 TNNQ9UQP3 1299 aa20.2■□□□□ 0.82
SNRPD3-204ENST00000439775 GNAI2P04899 355 aa20.19■□□□□ 0.82
SNRPD3-204ENST00000439775 CACNB3P54284 484 aa20.19■□□□□ 0.82
SNRPD3-204ENST00000439775 ZKSCAN2Q63HK3 967 aa20.19■□□□□ 0.82
SNRPD3-204ENST00000439775 ZNF296Q8WUU4 475 aaPredicted RBP20.19■□□□□ 0.82
SNRPD3-204ENST00000439775 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
SNRPD3-204ENST00000439775 PDS5AQ29RF7 1337 aaKnown RBP20.19■□□□□ 0.82
SNRPD3-204ENST00000439775 GPR25O00155 361 aa20.18■□□□□ 0.82
SNRPD3-204ENST00000439775 PRDX5P30044 214 aa20.18■□□□□ 0.82
SNRPD3-204ENST00000439775 CCDC102BQ68D86 513 aa20.18■□□□□ 0.82
SNRPD3-204ENST00000439775 IFNL1Q8IU54 200 aa20.18■□□□□ 0.82
SNRPD3-204ENST00000439775 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.18■□□□□ 0.821e-8■□□□□ 11
SNRPD3-204ENST00000439775 HOOK2Q96ED9 719 aa20.18■□□□□ 0.82
SNRPD3-204ENST00000439775 AKAP2Q9Y2D5 859 aa20.18■□□□□ 0.82
SNRPD3-204ENST00000439775 DAGLAQ9Y4D2 1042 aa20.18■□□□□ 0.82
SNRPD3-204ENST00000439775 LDHBP07195 334 aaKnown RBP20.17■□□□□ 0.82
SNRPD3-204ENST00000439775 ADORA1P30542 326 aa20.17■□□□□ 0.82
SNRPD3-204ENST00000439775 GJA5P36382 358 aa20.17■□□□□ 0.82
SNRPD3-204ENST00000439775 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.17■□□□□ 0.82
SNRPD3-204ENST00000439775 ZGPATQ8N5A5 531 aaKnown RBP20.17■□□□□ 0.82
SNRPD3-204ENST00000439775 ZBED9Q6R2W3 1325 aa20.17■□□□□ 0.82
SNRPD3-204ENST00000439775 A0A1B0GUL7 405 aa20.16■□□□□ 0.82
SNRPD3-204ENST00000439775 IGF2BP3O00425 579 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNRPD3-204ENST00000439775 MAP3K9P80192 1104 aa20.16■□□□□ 0.82
SNRPD3-204ENST00000439775 TFCP2Q12800 502 aa20.16■□□□□ 0.82
SNRPD3-204ENST00000439775 VGLL4Q14135 290 aa20.16■□□□□ 0.82
SNRPD3-204ENST00000439775 DIXDC1Q155Q3 683 aa20.16■□□□□ 0.82
SNRPD3-204ENST00000439775 TMEM57Q8N5G2 664 aa20.16■□□□□ 0.82
SNRPD3-204ENST00000439775 OPTNQ96CV9 577 aa20.16■□□□□ 0.82
SNRPD3-204ENST00000439775 ELP3Q9H9T3 547 aa20.16■□□□□ 0.82
SNRPD3-204ENST00000439775 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.16■□□□□ 0.82
SNRPD3-204ENST00000439775 TESPA1A2RU30 521 aaPredicted RBP20.15■□□□□ 0.82
SNRPD3-204ENST00000439775 RGS19P49795 217 aa20.15■□□□□ 0.82
SNRPD3-204ENST00000439775 TIMM10P62072 90 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms