RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-213	ENST00000439732	GSTO1	P78417	241 aa		11.63	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ERICH6	Q7L0X2	663 aa		11.63	□□□□□ -0.55
SMARCA2-213	ENST00000439732	KRT26	Q7Z3Y9	468 aa		11.63	□□□□□ -0.55
SMARCA2-213	ENST00000439732	SULF1	Q8IWU6	871 aa		11.63	□□□□□ -0.55
SMARCA2-213	ENST00000439732	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ZBED3	Q96IU2	234 aa	Predicted RBP	11.63	□□□□□ -0.55
SMARCA2-213	ENST00000439732	BCL11A	Q9H165	835 aa		11.63	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ZNF646	O15015	1829 aa	Predicted RBP	11.63	□□□□□ -0.55
SMARCA2-213	ENST00000439732	SPDYE2B	A6NHP3	402 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	LDHC	P07864	332 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	SPDYE6	P0CI01	402 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	MCAM	P43121	646 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	CRK	P46108	304 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	IRX6	P78412	446 aa	Predicted RBP	11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	NBPF9	Q3BBW0	867 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ANKRD45	Q5TZF3	282 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	TMED8	Q6PL24	325 aa	Predicted RBP	11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	USP48	Q86UV5	1035 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	DZIP1	Q86YF9	867 aa	Known RBP	11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ZDHHC15	Q96MV8	337 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	TLR7	Q9NYK1	1049 aa	Known RBP	11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	LRP2BP	Q9P2M1	347 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	CEP350	Q5VT06	3117 aa		11.62	□□□□□ -0.55
SMARCA2-213	ENST00000439732	SMARCA5	O60264	1052 aa	Predicted RBP	11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	NEFL	P07196	543 aa		11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	HSPA6	P17066	643 aa		11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ATP5J	P18859	108 aa		11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	APLP1	P51693	650 aa		11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	TTF1	Q15361	905 aa	Predicted RBP	11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	GRIK5	Q16478	980 aa		11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ANGEL2	Q5VTE6	544 aa	Known RBP	11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	FAM163A	Q96GL9	167 aa	Predicted RBP	11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	PRMT6	Q96LA8	375 aa	Predicted RBP	11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	SNRK	Q9NRH2	765 aa		11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	GGA3	Q9NZ52	723 aa		11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	RAI14	Q9P0K7	980 aa		11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ADAMTSL1	Q8N6G6	1762 aa		11.61	□□□□□ -0.55
SMARCA2-213	ENST00000439732	PRDX5	P30044	214 aa		11.6	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ZAP70	P43403	619 aa		11.6	□□□□□ -0.55
SMARCA2-213	ENST00000439732	TNFAIP1	Q13829	316 aa		11.6	□□□□□ -0.55
SMARCA2-213	ENST00000439732	FKBP1C	Q5VVH2	108 aa		11.6	□□□□□ -0.55
SMARCA2-213	ENST00000439732	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.6	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ECHDC1	Q9NTX5	307 aa		11.6	□□□□□ -0.55
SMARCA2-213	ENST00000439732	TMOD2	Q9NZR1	351 aa		11.6	□□□□□ -0.55
SMARCA2-213	ENST00000439732	AKAP11	Q9UKA4	1901 aa		11.6	□□□□□ -0.55
SMARCA2-213	ENST00000439732	PASK	Q96RG2	1323 aa		11.6	□□□□□ -0.55
SMARCA2-213	ENST00000439732	COL1A1	P02452	1464 aa	Predicted RBP	11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	TMEM88B	A6NKF7	163 aa		11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ERC2	O15083	957 aa		11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	MAP4K4	O95819	1239 aa	Predicted RBP	11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	CYP2E1	P05181	493 aa	Predicted RBP	11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	PI16	Q6UXB8	463 aa		11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	TBC1D9	Q6ZT07	1266 aa		11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	SMC5	Q8IY18	1101 aa		11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	NOL10	Q9BSC4	688 aa	Known RBP	11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ZNF70	Q9UC06	446 aa	Predicted RBP	11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	ASTN2	O75129	1339 aa	Predicted RBP	11.59	□□□□□ -0.55
SMARCA2-213	ENST00000439732	IGHD	P01880	384 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	TNNI2	P48788	182 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	MECOM	Q03112	1051 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	MAP3K12	Q12852	859 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	SPDYE2	Q495Y8	402 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	NSUN4	Q96CB9	384 aa	Known RBP	11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	HAUS7	Q99871	368 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	DEFB129	Q9H1M3	183 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	TDRD3	Q9H7E2	651 aa	Known RBP	11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	VEZT	Q9HBM0	779 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	CREBZF	Q9NS37	354 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	DAGLA	Q9Y4D2	1042 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	PPP2R3B	Q9Y5P8	575 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	MYH2	Q9UKX2	1941 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	TTC41P	Q6P2S7	1318 aa		11.58	□□□□□ -0.56
SMARCA2-213	ENST00000439732	TRPM7	Q96QT4	1865 aa		11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	TRAF5	O00463	557 aa		11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	IDH1	O75874	414 aa	Known RBP	11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	CELF2	O95319	508 aa	Known RBP	11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	BAG3	O95817	575 aa		11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	NF2	P35240	595 aa		11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	DIXDC1	Q155Q3	683 aa		11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	SUPT20HL1	Q3ZLR7	823 aa		11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	NAA16	Q6N069	864 aa	Predicted RBP	11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	CERS3	Q8IU89	383 aa		11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	C2orf69	Q8N8R5	385 aa		11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	BOLA2	Q9H3K6	86 aa		11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	GAK	O14976	1311 aa		11.57	□□□□□ -0.56
SMARCA2-213	ENST00000439732	ECM29	Q5VYK3	1845 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	GPR75-ASB3	A0A0A6YYF3	556 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	CLRN2	A0PK11	232 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	ADM5	C9JUS6	153 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	GOLIM4	O00461	696 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	GLRX3	O76003	335 aa	Known RBP	11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	PLCG2	P16885	1265 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	MX1	P20591	662 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	NUCB1	Q02818	461 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	FAM83A	Q86UY5	434 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	HOOK2	Q96ED9	719 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	CDCA5	Q96FF9	252 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	DNAJC2	Q99543	621 aa	Known RBP	11.56	□□□□□ -0.56

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