RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 NPHP1O15259 732 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 JAK2O60674 1132 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 APPP05067 770 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 GYS1P13807 737 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 NCLP19338 710 aaKnown RBP13.89□□□□□ -0.19
SMAD3-202ENST00000439724 PDIA3P30101 505 aaKnown RBP13.89□□□□□ -0.19
SMAD3-202ENST00000439724 ANTXR2P58335 489 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 TRDNQ13061 729 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 CSPP1Q1MSJ5 1256 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 CDC37L1Q7L3B6 337 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 USP48Q86UV5 1035 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 TBC1D10CQ8IV04 446 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 IFNL3Q8IZI9 196 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 CCDC24Q8N4L8 307 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 NSUN7Q8NE18 718 aaKnown RBP13.89□□□□□ -0.19
SMAD3-202ENST00000439724 ARMT1Q9H993 441 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 CNPY2Q9Y2B0 182 aa13.89□□□□□ -0.19
SMAD3-202ENST00000439724 GSG1L2A8MUP6 293 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 DTNBO60941 627 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 TRIM37O94972 964 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 GRAPQ13588 217 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 ZSCAN23Q3MJ62 389 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 PRR5LQ6MZQ0 368 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 CHST3Q7LGC8 479 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 VPS37DQ86XT2 251 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 GRAPLQ8TC17 118 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-202ENST00000439724 NAPBQ9H115 298 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 IQSEC3Q9UPP2 1182 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-202ENST00000439724 KIF3AQ9Y496 699 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 SALL1Q9NSC2 1324 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 IRS2Q9Y4H2 1338 aa13.88□□□□□ -0.19
SMAD3-202ENST00000439724 KIAA1551Q9HCM1 1747 aa13.87□□□□□ -0.19
SMAD3-202ENST00000439724 WTIPA6NIX2 430 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-202ENST00000439724 CTDNEP1O95476 244 aa13.87□□□□□ -0.19
SMAD3-202ENST00000439724 XRCC6P12956 609 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMAD3-202ENST00000439724 CYP7A1P22680 504 aa13.87□□□□□ -0.19
SMAD3-202ENST00000439724 RBM6P78332 1123 aaKnown RBP13.87□□□□□ -0.19
SMAD3-202ENST00000439724 FOXD4L6Q3SYB3 417 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-202ENST00000439724 TMED8Q6PL24 325 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-202ENST00000439724 FOXD4L3Q6VB84 417 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-202ENST00000439724 GAS2L3Q86XJ1 694 aa13.87□□□□□ -0.19
SMAD3-202ENST00000439724 LCORLQ8N3X6 602 aa13.87□□□□□ -0.19
SMAD3-202ENST00000439724 GRPEL1Q9HAV7 217 aa13.87□□□□□ -0.19
SMAD3-202ENST00000439724 GDPD2Q9HCC8 539 aa13.87□□□□□ -0.19
SMAD3-202ENST00000439724 NSFL1CQ9UNZ2 370 aaKnown RBP13.87□□□□□ -0.19
SMAD3-202ENST00000439724 PTPDC1A2A3K4 754 aa13.86□□□□□ -0.19
SMAD3-202ENST00000439724 KLRK1P26718 216 aa13.86□□□□□ -0.19
SMAD3-202ENST00000439724 HIBADHP31937 336 aaKnown RBP13.86□□□□□ -0.19
SMAD3-202ENST00000439724 CRY2Q49AN0 593 aa13.86□□□□□ -0.19
SMAD3-202ENST00000439724 ZNF772Q68DY9 489 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-202ENST00000439724 NACAP1Q9BZK3 213 aa13.86□□□□□ -0.19
SMAD3-202ENST00000439724 RAI14Q9P0K7 980 aa13.86□□□□□ -0.19
SMAD3-202ENST00000439724 TMEM63CQ9P1W3 806 aa13.86□□□□□ -0.19
SMAD3-202ENST00000439724 MYH15Q9Y2K3 1946 aa13.86□□□□□ -0.19
SMAD3-202ENST00000439724 IGSF3O75054 1194 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 SERPINB2P05120 415 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 UBE2HP62256 183 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 DNM1Q05193 864 aaKnown RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 TXNRD1Q16881 649 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 NAA16Q6N069 864 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 FAM184AQ8NB25 1140 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 SYAP1Q96A49 352 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 TMEM87BQ96K49 555 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 GPHNQ9NQX3 736 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 ABCF2Q9UG63 623 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 BRPF3Q9ULD4 1205 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 SLC4A4Q9Y6R1 1079 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 CCDC88AQ3V6T2 1871 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 NEDD4P46934 1319 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 MAGEB6P1A0A0J9YX57 407 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 KLF18A0A0U1RQI7 1052 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 SH2B2O14492 632 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 FIBPO43427 364 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 PRKAB2O43741 272 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 DHX16O60231 1041 aaKnown RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 GADD45BO75293 160 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 CCT2P78371 535 aaKnown RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 KRT85P78386 507 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 ST5P78524 1137 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 C15orf52Q6ZUT6 534 aaKnown RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 CYB5R4Q7L1T6 521 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 ADGRA1Q86SQ6 560 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 RIOK1Q9BRS2 568 aaKnown RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 CNNM2Q9H8M5 875 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 ANGEL1Q9UNK9 670 aaKnown RBP13.85□□□□□ -0.19
SMAD3-202ENST00000439724 HPS5Q9UPZ3 1129 aa13.85□□□□□ -0.19
SMAD3-202ENST00000439724 ELP1O95163 1332 aa13.84□□□□□ -0.19
SMAD3-202ENST00000439724 XDHP47989 1333 aa13.84□□□□□ -0.19
SMAD3-202ENST00000439724 GOLGA8BA8MQT2 603 aa13.84□□□□□ -0.19
SMAD3-202ENST00000439724 TDO2P48775 406 aa13.84□□□□□ -0.19
SMAD3-202ENST00000439724 RESTQ13127 1097 aa13.84□□□□□ -0.19
SMAD3-202ENST00000439724 AKNAD1Q5T1N1 836 aa13.84□□□□□ -0.19
SMAD3-202ENST00000439724 PROM2Q8N271 834 aa13.84□□□□□ -0.19
SMAD3-202ENST00000439724 MIGA1Q8NAN2 632 aa13.84□□□□□ -0.19
SMAD3-202ENST00000439724 STAG1Q8WVM7 1258 aa13.84□□□□□ -0.19
SMAD3-202ENST00000439724 RPGRQ92834 1020 aaKnown RBP13.84□□□□□ -0.19
SMAD3-202ENST00000439724 DDX11Q96FC9 970 aa13.84□□□□□ -0.19
SMAD3-202ENST00000439724 KRT23Q9C075 422 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms