RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 HSPA1BP0DMV9 641 aaKnown RBP12.9□□□□□ -0.34
MCF2L-216ENST00000439475 MAP2K2P36507 400 aa12.9□□□□□ -0.34
MCF2L-216ENST00000439475 TTLL12Q14166 644 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-216ENST00000439475 SUPT20HL1Q3ZLR7 823 aa12.9□□□□□ -0.34
MCF2L-216ENST00000439475 CYP4F22Q6NT55 531 aa12.9□□□□□ -0.34
MCF2L-216ENST00000439475 RGMBQ6NW40 437 aa12.9□□□□□ -0.34
MCF2L-216ENST00000439475 ERC1Q8IUD2 1116 aa12.9□□□□□ -0.34
MCF2L-216ENST00000439475 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
MCF2L-216ENST00000439475 AIDAQ96BJ3 306 aa12.9□□□□□ -0.34
MCF2L-216ENST00000439475 BEGAINQ9BUH8 593 aa12.9□□□□□ -0.34
MCF2L-216ENST00000439475 VEZTQ9HBM0 779 aa12.9□□□□□ -0.34
MCF2L-216ENST00000439475 TMOD2Q9NZR1 351 aa12.9□□□□□ -0.34
MCF2L-216ENST00000439475 NOP58Q9Y2X3 529 aaKnown RBP12.9□□□□□ -0.34
MCF2L-216ENST00000439475 CLRN2A0PK11 232 aa12.89□□□□□ -0.35
MCF2L-216ENST00000439475 LDHBP07195 334 aaKnown RBP12.89□□□□□ -0.35
MCF2L-216ENST00000439475 UQCRFS1P1P0C7P4 283 aa12.89□□□□□ -0.35
MCF2L-216ENST00000439475 PHKA1P46020 1223 aa12.89□□□□□ -0.35
MCF2L-216ENST00000439475 CCDC158Q5M9N0 1113 aa12.89□□□□□ -0.35
MCF2L-216ENST00000439475 SPTY2D1Q68D10 685 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-216ENST00000439475 CEP85Q6P2H3 762 aa12.89□□□□□ -0.35
MCF2L-216ENST00000439475 HHIPL2Q6UWX4 724 aa12.89□□□□□ -0.35
MCF2L-216ENST00000439475 DLK2Q6UY11 383 aa12.89□□□□□ -0.35
MCF2L-216ENST00000439475 ARMC9Q7Z3E5 817 aa12.89□□□□□ -0.35
MCF2L-216ENST00000439475 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
MCF2L-216ENST00000439475 YTHDC1Q96MU7 727 aaKnown RBP12.89□□□□□ -0.35
MCF2L-216ENST00000439475 DEFB129Q9H1M3 183 aa12.89□□□□□ -0.35
MCF2L-216ENST00000439475 MYH13Q9UKX3 1938 aa12.88□□□□□ -0.35
MCF2L-216ENST00000439475 PPP1R12BO60237 982 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-216ENST00000439475 ADORA1P30542 326 aa12.88□□□□□ -0.35
MCF2L-216ENST00000439475 ZNF157P51786 506 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-216ENST00000439475 NOGQ13253 232 aa12.88□□□□□ -0.35
MCF2L-216ENST00000439475 TDRD3Q9H7E2 651 aaKnown RBP12.88□□□□□ -0.35
MCF2L-216ENST00000439475 ZNF70Q9UC06 446 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-216ENST00000439475 SCAF8Q9UPN6 1271 aaKnown RBP12.88□□□□□ -0.35
MCF2L-216ENST00000439475 COL1A1P02452 1464 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-216ENST00000439475 SALL1Q9NSC2 1324 aa12.88□□□□□ -0.35
MCF2L-216ENST00000439475 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
MCF2L-216ENST00000439475 PRAMEF18Q5VWM3 479 aa12.87□□□□□ -0.35
MCF2L-216ENST00000439475 ZDHHC15Q96MV8 337 aa12.87□□□□□ -0.35
MCF2L-216ENST00000439475 ZBTB40Q9NUA8 1239 aa12.87□□□□□ -0.35
MCF2L-216ENST00000439475 ABCF2Q9UG63 623 aa12.87□□□□□ -0.35
MCF2L-216ENST00000439475 PCDHAC2Q9Y5I4 1007 aa12.87□□□□□ -0.35
MCF2L-216ENST00000439475 PDS5AQ29RF7 1337 aaKnown RBP12.87□□□□□ -0.35
MCF2L-216ENST00000439475 ECM29Q5VYK3 1845 aa12.86□□□□□ -0.35
MCF2L-216ENST00000439475 RASA3Q14644 834 aa12.86□□□□□ -0.35
MCF2L-216ENST00000439475 GRIK5Q16478 980 aa12.86□□□□□ -0.35
MCF2L-216ENST00000439475 TNNI3KQ59H18 835 aa12.86□□□□□ -0.35
MCF2L-216ENST00000439475 TTC39AQ5SRH9 613 aa12.86□□□□□ -0.35
MCF2L-216ENST00000439475 ERICH6Q7L0X2 663 aa12.86□□□□□ -0.35
MCF2L-216ENST00000439475 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-216ENST00000439475 FPGT-TNNI3KV9GXZ4 949 aa12.86□□□□□ -0.35
MCF2L-216ENST00000439475 UBE2Q2LH0YL09 131 aa12.85□□□□□ -0.35
MCF2L-216ENST00000439475 DZIP1Q86YF9 867 aaKnown RBP12.85□□□□□ -0.35
MCF2L-216ENST00000439475 HOOK2Q96ED9 719 aa12.85□□□□□ -0.35
MCF2L-216ENST00000439475 WBP1LQ9NX94 342 aa12.85□□□□□ -0.35
MCF2L-216ENST00000439475 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
MCF2L-216ENST00000439475 ARAP2Q8WZ64 1704 aa12.85□□□□□ -0.35
MCF2L-216ENST00000439475 UNCXA6NJT0 531 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 TCP10L2B9ZVM9 353 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 IGSF3O75054 1194 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 LDHCP07864 332 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 ARID4AP29374 1257 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-216ENST00000439475 PRDX5P30044 214 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 CTCFP49711 727 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-216ENST00000439475 RASGRF1Q13972 1273 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 PRKG1Q13976 671 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 FKBP1CQ5VVH2 108 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 CLASRPQ8N2M8 674 aaKnown RBP12.84□□□□□ -0.35
MCF2L-216ENST00000439475 SPATA5Q8NB90 893 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 KIF1BPQ96EK5 621 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 EXOC6BQ9Y2D4 811 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 PAPPA2Q9BXP8 1791 aa12.84□□□□□ -0.35
MCF2L-216ENST00000439475 CA12O43570 354 aa12.83□□□□□ -0.36
MCF2L-216ENST00000439475 AOC2O75106 756 aa12.83□□□□□ -0.36
MCF2L-216ENST00000439475 IREB2P48200 963 aaKnown RBP12.83□□□□□ -0.36
MCF2L-216ENST00000439475 GSTO1P78417 241 aa12.83□□□□□ -0.36
MCF2L-216ENST00000439475 NBPF12Q5TAG4 269 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-216ENST00000439475 APOBEC3HQ6NTF7 200 aaKnown RBP12.83□□□□□ -0.36
MCF2L-216ENST00000439475 FAM83AQ86UY5 434 aa12.83□□□□□ -0.36
MCF2L-216ENST00000439475 RHPN1Q8TCX5 695 aa12.83□□□□□ -0.36
MCF2L-216ENST00000439475 ZNF512BQ96KM6 892 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-216ENST00000439475 DBNDD2Q9BQY9 259 aa12.83□□□□□ -0.36
MCF2L-216ENST00000439475 HMG20BQ9P0W2 317 aa12.83□□□□□ -0.36
MCF2L-216ENST00000439475 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.36
MCF2L-216ENST00000439475 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-216ENST00000439475 SLC10A3P09131 477 aa12.82□□□□□ -0.36
MCF2L-216ENST00000439475 KIF23Q02241 960 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-216ENST00000439475 MAP3K11Q16584 847 aa12.82□□□□□ -0.36
MCF2L-216ENST00000439475 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
MCF2L-216ENST00000439475 MOB2Q70IA6 237 aa12.82□□□□□ -0.36
MCF2L-216ENST00000439475 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
MCF2L-216ENST00000439475 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-216ENST00000439475 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-216ENST00000439475 USP40Q9NVE5 1235 aa12.82□□□□□ -0.36
MCF2L-216ENST00000439475 RAI14Q9P0K7 980 aa12.82□□□□□ -0.36
MCF2L-216ENST00000439475 DAGLAQ9Y4D2 1042 aa12.82□□□□□ -0.36
MCF2L-216ENST00000439475 FOXN1O15353 648 aa12.81□□□□□ -0.36
MCF2L-216ENST00000439475 MCAMP43121 646 aa12.81□□□□□ -0.36
MCF2L-216ENST00000439475 DIXDC1Q155Q3 683 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms