RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 NSUN4Q96CB9 384 aaKnown RBP24.93■■□□□ 1.58
CHD3-204ENST00000439235 KCNQ5Q9NR82 932 aa24.93■■□□□ 1.58
CHD3-204ENST00000439235 MYH7P12883 1935 aa24.92■■□□□ 1.58
CHD3-204ENST00000439235 CHD4Q14839 1912 aa24.92■■□□□ 1.58
CHD3-204ENST00000439235 TCRBV5S4A2TA0A5A2 114 aa24.92■■□□□ 1.58
CHD3-204ENST00000439235 CYP7A1P22680 504 aa24.92■■□□□ 1.58
CHD3-204ENST00000439235 PRELPP51888 382 aa24.92■■□□□ 1.58
CHD3-204ENST00000439235 MFAP1P55081 439 aaKnown RBP24.92■■□□□ 1.58
CHD3-204ENST00000439235 MCMDC2Q4G0Z9 681 aa24.92■■□□□ 1.58
CHD3-204ENST00000439235 SLF2Q8IX21 1173 aa24.92■■□□□ 1.58
CHD3-204ENST00000439235 PSME4Q14997 1843 aa24.91■■□□□ 1.58
CHD3-204ENST00000439235 RAD17O75943 681 aa24.91■■□□□ 1.58
CHD3-204ENST00000439235 REC8O95072 547 aa24.91■■□□□ 1.58
CHD3-204ENST00000439235 CIAPIN1Q6FI81 312 aa24.91■■□□□ 1.58
CHD3-204ENST00000439235 CERS5Q8N5B7 392 aa24.91■■□□□ 1.58
CHD3-204ENST00000439235 SCN9AQ15858 1988 aa24.91■■□□□ 1.58
CHD3-204ENST00000439235 CHGBP05060 677 aa24.9■■□□□ 1.58
CHD3-204ENST00000439235 LDHCP07864 332 aa24.9■■□□□ 1.58
CHD3-204ENST00000439235 VIL1P09327 827 aaKnown RBP24.9■■□□□ 1.58
CHD3-204ENST00000439235 EIF6P56537 245 aaKnown RBP24.9■■□□□ 1.58
CHD3-204ENST00000439235 TNIP1Q15025 636 aa24.9■■□□□ 1.58
CHD3-204ENST00000439235 ZNF784Q8NCA9 323 aaPredicted RBP24.9■■□□□ 1.58
CHD3-204ENST00000439235 ZNF646O15015 1829 aaPredicted RBP24.89■■□□□ 1.58
CHD3-204ENST00000439235 FZD9O00144 591 aa24.89■■□□□ 1.58
CHD3-204ENST00000439235 PSMD14O00487 310 aa24.89■■□□□ 1.58
CHD3-204ENST00000439235 CXCL9Q07325 125 aa24.89■■□□□ 1.58
CHD3-204ENST00000439235 GRIK5Q16478 980 aa24.89■■□□□ 1.58
CHD3-204ENST00000439235 SLFNL1Q499Z3 407 aa24.89■■□□□ 1.58
CHD3-204ENST00000439235 RSBN1LQ6PCB5 846 aaPredicted RBP24.89■■□□□ 1.58
CHD3-204ENST00000439235 OSBP2Q969R2 916 aa24.89■■□□□ 1.58
CHD3-204ENST00000439235 UPF2Q9HAU5 1272 aaKnown RBP24.89■■□□□ 1.58
CHD3-204ENST00000439235 CCDC171Q6TFL3 1326 aa24.88■■□□□ 1.57
CHD3-204ENST00000439235 MYO5AQ9Y4I1 1855 aaKnown RBP24.88■■□□□ 1.57
CHD3-204ENST00000439235 KIAA1211Q6ZU35 1233 aa24.88■■□□□ 1.57
CHD3-204ENST00000439235 MXD3Q9BW11 206 aa24.88■■□□□ 1.57
CHD3-204ENST00000439235 CCDC88AQ3V6T2 1871 aa24.87■■□□□ 1.57
CHD3-204ENST00000439235 M0R2C6 588 aa24.87■■□□□ 1.57
CHD3-204ENST00000439235 ZNF384Q8TF68 577 aa24.87■■□□□ 1.57
CHD3-204ENST00000439235 AIDAQ96BJ3 306 aa24.87■■□□□ 1.57
CHD3-204ENST00000439235 SEC62Q99442 399 aaKnown RBP24.87■■□□□ 1.57
CHD3-204ENST00000439235 NOL10Q9BSC4 688 aaKnown RBP24.87■■□□□ 1.57
CHD3-204ENST00000439235 PUS7LQ9H0K6 701 aaKnown RBP24.87■■□□□ 1.57
CHD3-204ENST00000439235 IL25Q9H293 177 aa24.87■■□□□ 1.57
CHD3-204ENST00000439235 ANO2Q9NQ90 1003 aa24.87■■□□□ 1.57
CHD3-204ENST00000439235 RNF181Q9P0P0 153 aa24.87■■□□□ 1.57
CHD3-204ENST00000439235 TTF2Q9UNY4 1162 aaKnown RBP24.87■■□□□ 1.57
CHD3-204ENST00000439235 MROH7-TTC4A0A0A0MT08 1334 aa24.86■■□□□ 1.57
CHD3-204ENST00000439235 CERS3Q8IU89 383 aa24.86■■□□□ 1.57
CHD3-204ENST00000439235 AGBL3Q8NEM8 1001 aa24.86■■□□□ 1.57
CHD3-204ENST00000439235 F8W031 263 aaPredicted RBP24.85■■□□□ 1.57
CHD3-204ENST00000439235 SEC24BO95487 1268 aa24.85■■□□□ 1.57
CHD3-204ENST00000439235 ZNF589Q86UQ0 364 aaPredicted RBP24.85■■□□□ 1.57
CHD3-204ENST00000439235 KIAA0825Q8IV33 1275 aa24.85■■□□□ 1.57
CHD3-204ENST00000439235 FAM163AQ96GL9 167 aaPredicted RBP24.85■■□□□ 1.57
CHD3-204ENST00000439235 MAGEB6P1A0A0J9YX57 407 aa24.84■■□□□ 1.57
CHD3-204ENST00000439235 GPAA1O43292 621 aa24.84■■□□□ 1.57
CHD3-204ENST00000439235 EPB41L2O43491 1005 aaKnown RBP24.84■■□□□ 1.57
CHD3-204ENST00000439235 RPS12P25398 132 aaKnown RBP24.84■■□□□ 1.57
CHD3-204ENST00000439235 HDLBPQ00341 1268 aaKnown RBP24.84■■□□□ 1.57
CHD3-204ENST00000439235 DIXDC1Q155Q3 683 aa24.84■■□□□ 1.57
CHD3-204ENST00000439235 C9orf131Q5VYM1 1079 aa24.84■■□□□ 1.57
CHD3-204ENST00000439235 CCDC129Q6ZRS4 1044 aa24.84■■□□□ 1.57
CHD3-204ENST00000439235 ADGRA1Q86SQ6 560 aa24.84■■□□□ 1.57
CHD3-204ENST00000439235 DICER1Q9UPY3 1922 aaKnown RBP24.84■■□□□ 1.57
CHD3-204ENST00000439235 GAKO14976 1311 aa24.84■■□□□ 1.57
CHD3-204ENST00000439235 MBD4O95243 580 aa24.83■■□□□ 1.57
CHD3-204ENST00000439235 BAG3O95817 575 aa24.83■■□□□ 1.57
CHD3-204ENST00000439235 MIGA1Q8NAN2 632 aa24.83■■□□□ 1.57
CHD3-204ENST00000439235 TEKT1Q969V4 418 aa24.83■■□□□ 1.57
CHD3-204ENST00000439235 GMLQ99445 158 aa24.83■■□□□ 1.57
CHD3-204ENST00000439235 MRIQ9BWK5 157 aa24.83■■□□□ 1.57
CHD3-204ENST00000439235 HDAC9Q9UKV0 1011 aa24.83■■□□□ 1.57
CHD3-204ENST00000439235 TIAM2Q8IVF5 1701 aa24.83■■□□□ 1.57
CHD3-204ENST00000439235 SBF1O95248 1867 aa24.82■■□□□ 1.56
CHD3-204ENST00000439235 GNAT2P19087 354 aa24.82■■□□□ 1.56
CHD3-204ENST00000439235 HHIPL2Q6UWX4 724 aa24.82■■□□□ 1.56
CHD3-204ENST00000439235 SERPINA10Q9UK55 444 aa24.82■■□□□ 1.56
CHD3-204ENST00000439235 ZNF541Q9H0D2 1346 aa24.82■■□□□ 1.56
CHD3-204ENST00000439235 MMP14P50281 582 aa24.81■■□□□ 1.56
CHD3-204ENST00000439235 SCNN1DP51172 638 aa24.81■■□□□ 1.56
CHD3-204ENST00000439235 OGFOD1Q8N543 542 aa24.81■■□□□ 1.56
CHD3-204ENST00000439235 STRBPQ96SI9 672 aaKnown RBP24.81■■□□□ 1.56
CHD3-204ENST00000439235 LSG1Q9H089 658 aaKnown RBP24.81■■□□□ 1.56
CHD3-204ENST00000439235 ARMT1Q9H993 441 aa24.81■■□□□ 1.56
CHD3-204ENST00000439235 ZBTB12Q9Y330 459 aaPredicted RBP24.81■■□□□ 1.56
CHD3-204ENST00000439235 ZC3H4Q9UPT8 1303 aaKnown RBP24.81■■□□□ 1.56
CHD3-204ENST00000439235 PLCG2P16885 1265 aa24.8■■□□□ 1.56
CHD3-204ENST00000439235 BTDP43251 543 aa24.8■■□□□ 1.56
CHD3-204ENST00000439235 CRKP46108 304 aa24.8■■□□□ 1.56
CHD3-204ENST00000439235 LCORLQ8N3X6 602 aa24.8■■□□□ 1.56
CHD3-204ENST00000439235 RIOK1Q9BRS2 568 aaKnown RBP24.8■■□□□ 1.56
CHD3-204ENST00000439235 DSCC1Q9BVC3 393 aa24.8■■□□□ 1.56
CHD3-204ENST00000439235 AATFQ9NY61 560 aaKnown RBP eCLIP24.8■■□□□ 1.56
CHD3-204ENST00000439235 DAGLAQ9Y4D2 1042 aa24.8■■□□□ 1.56
CHD3-204ENST00000439235 GJA3Q9Y6H8 435 aa24.8■■□□□ 1.56
CHD3-204ENST00000439235 GPR75-ASB3A0A0A6YYF3 556 aa24.79■■□□□ 1.56
CHD3-204ENST00000439235 USP17L8P0C7I0 530 aa24.79■■□□□ 1.56
CHD3-204ENST00000439235 PPP4CP60510 307 aa24.79■■□□□ 1.56
CHD3-204ENST00000439235 RPAP1Q9BWH6 1393 aaPredicted RBP24.79■■□□□ 1.56
CHD3-204ENST00000439235 MCCP23508 829 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms