RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 MEI1Q5TIA1 1274 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 SCARA3Q6AZY7 606 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 TXNDC11Q6PKC3 985 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 IGF2-ASQ6U949 168 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 HS2ST1Q7LGA3 356 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 RELL1Q8IUW5 271 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 FMR1NBQ8N0W7 255 aaPredicted RBP6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 KLHDC7BQ96G42 594 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 NACC1Q96RE7 527 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 RSRP1Q9BUV0 290 aa6.23□□□□□ -1.41
LSM1P1-201ENST00000438629 SPATA31C1P0DKV0 1188 aa6.22□□□□□ -1.41
LSM1P1-201ENST00000438629 ARNTP27540 789 aa6.22□□□□□ -1.41
LSM1P1-201ENST00000438629 CYP8B1Q9UNU6 501 aa6.22□□□□□ -1.41
LSM1P1-201ENST00000438629 DLL1O00548 723 aa6.21□□□□□ -1.42
LSM1P1-201ENST00000438629 ENC1O14682 589 aa6.21□□□□□ -1.42
LSM1P1-201ENST00000438629 DEAF1O75398 565 aaPredicted RBP6.21□□□□□ -1.42
LSM1P1-201ENST00000438629 TCF3P15923 654 aa6.21□□□□□ -1.42
LSM1P1-201ENST00000438629 LMNB1P20700 586 aa6.21□□□□□ -1.42
LSM1P1-201ENST00000438629 ZNF157P51786 506 aaPredicted RBP6.21□□□□□ -1.42
LSM1P1-201ENST00000438629 RPS26P62854 115 aaKnown RBP6.21□□□□□ -1.42
LSM1P1-201ENST00000438629 POU4F3Q15319 338 aa6.21□□□□□ -1.42
LSM1P1-201ENST00000438629 LDLRAD1Q5T700 205 aa6.21□□□□□ -1.42
LSM1P1-201ENST00000438629 CORO1BQ9BR76 489 aa6.21□□□□□ -1.42
LSM1P1-201ENST00000438629 FBXO24O75426 580 aa6.2□□□□□ -1.42
LSM1P1-201ENST00000438629 APBA3O96018 575 aa6.2□□□□□ -1.42
LSM1P1-201ENST00000438629 FANCCQ00597 558 aa6.2□□□□□ -1.42
LSM1P1-201ENST00000438629 NRG1Q02297 640 aaPredicted RBP6.2□□□□□ -1.42
LSM1P1-201ENST00000438629 SULF2Q8IWU5 870 aa6.2□□□□□ -1.42
LSM1P1-201ENST00000438629 GALNT11Q8NCW6 608 aa6.2□□□□□ -1.42
LSM1P1-201ENST00000438629 CARD10Q9BWT7 1032 aa6.2□□□□□ -1.42
LSM1P1-201ENST00000438629 MRPL18Q9H0U6 180 aaKnown RBP6.2□□□□□ -1.42
LSM1P1-201ENST00000438629 GGT7Q9UJ14 662 aa6.2□□□□□ -1.42
LSM1P1-201ENST00000438629 C9orf172C9J069 976 aa6.19□□□□□ -1.42
LSM1P1-201ENST00000438629 DUOXA2Q1HG44 320 aa6.19□□□□□ -1.42
LSM1P1-201ENST00000438629 TTBK2Q6IQ55 1244 aa6.19□□□□□ -1.42
LSM1P1-201ENST00000438629 TMEM130Q8N3G9 435 aa6.19□□□□□ -1.42
LSM1P1-201ENST00000438629 CBX8Q9HC52 389 aa6.19□□□□□ -1.42
LSM1P1-201ENST00000438629 KRT82Q9NSB4 513 aa6.19□□□□□ -1.42
LSM1P1-201ENST00000438629 CELA3AP09093 270 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 GSTP1P09211 210 aaKnown RBP6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 BMP6P22004 513 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 MAOBP27338 520 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 RANGAP1P46060 587 aaPredicted RBP6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 LIG3P49916 1009 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 NLRP12P59046 1061 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 EXOSC6Q5RKV6 272 aaKnown RBP6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 PCNX4Q63HM2 1172 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 HGSNATQ68CP4 663 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 AGMOQ6ZNB7 445 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 ERMP1Q7Z2K6 904 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 LENG1Q96BZ8 264 aaPredicted RBP6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 TMEM74Q96NL1 305 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 USP26Q9BXU7 913 aa6.18□□□□□ -1.42
LSM1P1-201ENST00000438629 MEGF11A6BM72 1044 aa6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 TM4SF5O14894 197 aa6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 SLFN14P0C7P3 912 aa6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 GBP2P32456 591 aaPredicted RBP6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 HDLBPQ00341 1268 aaKnown RBP6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 FOXD4L6Q3SYB3 417 aaPredicted RBP6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 LLGL2Q6P1M3 1020 aa6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 FOXD4L3Q6VB84 417 aaPredicted RBP6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 CCDC84Q86UT8 332 aaPredicted RBP6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 ZNF654Q8IZM8 581 aa6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 TRIM56Q9BRZ2 755 aaKnown RBP6.17□□□□□ -1.42
LSM1P1-201ENST00000438629 LOC100289279A0A1B0GTE1 492 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 DDX3YO15523 660 aaKnown RBP6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 PAGE1O75459 146 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 TRIM37O94972 964 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 LMNB2Q03252 620 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 GRIK4Q16099 956 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 MAP3K11Q16584 847 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 USP48Q86UV5 1035 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 METTL16Q86W50 562 aaKnown RBP6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 PHC3Q8NDX5 983 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 KCNB2Q92953 911 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 RUSC1Q9BVN2 902 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 NRSN2Q9GZP1 204 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 RNF208Q9H0X6 261 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 MIR1-1HGQ9H1L0 117 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 CYP4F12Q9HCS2 524 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 RAD18Q9NS91 495 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 IGSF5Q9NSI5 407 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 KCNK4Q9NYG8 393 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 USP21Q9UK80 565 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 SYNGAP1Q96PV0 1343 aa6.16□□□□□ -1.42
LSM1P1-201ENST00000438629 ADAM11O75078 769 aa6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 COL8A1P27658 744 aa6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 ERCC5P28715 1186 aaPredicted RBP6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 ZNF252P-AS1Q0IIN9 211 aa6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 PDE3AQ14432 1141 aa6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 NUTM2GQ5VZR2 741 aa6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 ACAD11Q709F0 780 aa6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 PDZD3Q86UT5 571 aa6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 NT5DC4Q86YG4 428 aa6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 TGIF2Q9GZN2 237 aa6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 KBTBD4Q9NVX7 518 aa6.15□□□□□ -1.42
LSM1P1-201ENST00000438629 MINDY4BA8MYZ0 360 aa6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 SELPP16109 830 aa6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 EIF4A3P38919 411 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms