RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 RPL13P26373 211 aaKnown RBP17.93■□□□□ 0.46
PTPN13-204ENST00000436978 CCNL1Q9UK58 526 aaPredicted RBP17.93■□□□□ 0.46
PTPN13-204ENST00000436978 A0A1W2PRG0 241 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 MARCKSP29966 332 aaPredicted RBP17.93■□□□□ 0.46
PTPN13-204ENST00000436978 GIMAP6Q6P9H5 292 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 CWF19L2Q2TBE0 894 aaKnown RBP17.93■□□□□ 0.46
PTPN13-204ENST00000436978 SUPT20HQ8NEM7 779 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 PRIMPOLQ96LW4 560 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 PDE8AO60658 829 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 PCDHB15Q9Y5E8 787 aa17.93■□□□□ 0.46
PTPN13-204ENST00000436978 CCDC65Q8IXS2 484 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 C6orf163Q5TEZ5 329 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 ZNF354CQ86Y25 554 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 DISP1Q96F81 1524 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 WDR66Q8TBY9 1149 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 RIMBP2O15034 1052 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 DHX58Q96C10 678 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 TCHPQ9BT92 498 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 GGA1Q9UJY5 639 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 KRT86O43790 486 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 IQCGQ9H095 443 aaKnown RBP17.92■□□□□ 0.46
PTPN13-204ENST00000436978 MROH5Q6ZUA9 1318 aa17.92■□□□□ 0.46
PTPN13-204ENST00000436978 NSRP1Q9H0G5 558 aaKnown RBP17.92■□□□□ 0.46
PTPN13-204ENST00000436978 TMEM87BQ96K49 555 aa17.91■□□□□ 0.46
PTPN13-204ENST00000436978 ITGA6P23229 1130 aa17.91■□□□□ 0.46
PTPN13-204ENST00000436978 TEX11Q8IYF3 940 aa17.91■□□□□ 0.46
PTPN13-204ENST00000436978 CEP63Q96MT8 703 aa17.91■□□□□ 0.46
PTPN13-204ENST00000436978 HECW2Q9P2P5 1572 aa17.91■□□□□ 0.46
PTPN13-204ENST00000436978 ELP1O95163 1332 aa17.91■□□□□ 0.46
PTPN13-204ENST00000436978 UFL1O94874 794 aa17.91■□□□□ 0.46
PTPN13-204ENST00000436978 MAP3K19Q56UN5 1328 aa17.91■□□□□ 0.46
PTPN13-204ENST00000436978 IQUBQ8NA54 791 aa17.91■□□□□ 0.46
PTPN13-204ENST00000436978 CCDC14Q49A88 953 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 ZCCHC11Q5TAX3 1644 aaKnown RBP17.9■□□□□ 0.46
PTPN13-204ENST00000436978 KDM5DQ9BY66 1539 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 HCLS1P14317 486 aaPredicted RBP17.9■□□□□ 0.46
PTPN13-204ENST00000436978 SMTNP53814 917 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 LZTS2Q9BRK4 669 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 SRRTQ9BXP5 876 aaKnown RBP17.9■□□□□ 0.46
PTPN13-204ENST00000436978 UBXN1Q04323 297 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 LLPHQ9BRT6 129 aaKnown RBP17.9■□□□□ 0.46
PTPN13-204ENST00000436978 PLCD1P51178 756 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 SLC52A2Q9HAB3 445 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 APOBRQ0VD83 1088 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 KIF5AQ12840 1032 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 CCDC77Q9BR77 488 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 SH3TC1Q8TE82 1336 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 AK2P54819 239 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 CLASP1Q7Z460 1538 aa17.9■□□□□ 0.46
PTPN13-204ENST00000436978 GSTA5Q7RTV2 222 aa17.89■□□□□ 0.46
PTPN13-204ENST00000436978 AOPEPQ8N6M6 819 aa17.89■□□□□ 0.46
PTPN13-204ENST00000436978 KIFAP3Q92845 792 aa17.89■□□□□ 0.46
PTPN13-204ENST00000436978 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
PTPN13-204ENST00000436978 KCNA6P17658 529 aa17.89■□□□□ 0.45
PTPN13-204ENST00000436978 HAUS3Q68CZ6 603 aa17.89■□□□□ 0.45
PTPN13-204ENST00000436978 JAKMIP2Q96AA8 810 aa17.89■□□□□ 0.45
PTPN13-204ENST00000436978 ZRANB1Q9UGI0 708 aa17.89■□□□□ 0.45
PTPN13-204ENST00000436978 DKC1O60832 514 aaKnown RBP eCLIP17.89■□□□□ 0.45
PTPN13-204ENST00000436978 EPB41P11171 864 aaKnown RBP17.89■□□□□ 0.45
PTPN13-204ENST00000436978 RAB3GAP1Q15042 981 aa17.89■□□□□ 0.45
PTPN13-204ENST00000436978 PTPDC1A2A3K4 754 aa17.89■□□□□ 0.45
PTPN13-204ENST00000436978 SYT1P21579 422 aa17.89■□□□□ 0.45
PTPN13-204ENST00000436978 HIBADHP31937 336 aaKnown RBP17.89■□□□□ 0.45
PTPN13-204ENST00000436978 DNM1Q05193 864 aaKnown RBP17.89■□□□□ 0.45
PTPN13-204ENST00000436978 SV2BQ7L1I2 683 aa17.89■□□□□ 0.45
PTPN13-204ENST00000436978 CDAN1Q8IWY9 1227 aa17.89■□□□□ 0.45
PTPN13-204ENST00000436978 BRDTQ58F21 947 aaPredicted RBP17.89■□□□□ 0.45
PTPN13-204ENST00000436978 DEXIO95424 95 aa17.88■□□□□ 0.45
PTPN13-204ENST00000436978 MBD4O95243 580 aa17.88■□□□□ 0.45
PTPN13-204ENST00000436978 CTAGE15A4D2H0 777 aa17.88■□□□□ 0.45
PTPN13-204ENST00000436978 POLR3GO15318 223 aaPredicted RBP17.88■□□□□ 0.45
PTPN13-204ENST00000436978 PPFIA3O75145 1194 aa17.88■□□□□ 0.45
PTPN13-204ENST00000436978 CTAGE8P0CG41 777 aa17.88■□□□□ 0.45
PTPN13-204ENST00000436978 CTAGE6Q86UF2 777 aa17.88■□□□□ 0.45
PTPN13-204ENST00000436978 CTAGE4Q8IX94 777 aa17.88■□□□□ 0.45
PTPN13-204ENST00000436978 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
PTPN13-204ENST00000436978 PLEKHM2Q8IWE5 1019 aa17.88■□□□□ 0.45
PTPN13-204ENST00000436978 H0YIN7 160 aa17.88■□□□□ 0.45
PTPN13-204ENST00000436978 RNF187Q5TA31 235 aaPredicted RBP17.88■□□□□ 0.45
PTPN13-204ENST00000436978 CHMLP26374 656 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 RBM26Q5T8P6 1007 aaKnown RBP17.87■□□□□ 0.45
PTPN13-204ENST00000436978 ATP2A2P16615 1042 aaKnown RBP17.87■□□□□ 0.45
PTPN13-204ENST00000436978 EIF6P56537 245 aaKnown RBP17.87■□□□□ 0.45
PTPN13-204ENST00000436978 BMS1Q14692 1282 aaKnown RBP17.87■□□□□ 0.45
PTPN13-204ENST00000436978 CNNM4Q6P4Q7 775 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 EYA2O00167 538 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 BACH1O14867 736 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 GAS8O95995 478 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 CEP128Q6ZU80 1094 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 EEF2P13639 858 aaKnown RBP17.87■□□□□ 0.45
PTPN13-204ENST00000436978 TNNI3KQ59H18 835 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 CCDC50Q8IVM0 306 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 DACT1Q9NYF0 836 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 FPGT-TNNI3KV9GXZ4 949 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 DYNC1I1O14576 645 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 PDE6BP35913 854 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 SKAP1Q86WV1 359 aa17.87■□□□□ 0.45
PTPN13-204ENST00000436978 A0A1B0GUL7 405 aa17.86■□□□□ 0.45
PTPN13-204ENST00000436978 CALUO43852 315 aaPredicted RBP17.86■□□□□ 0.45
PTPN13-204ENST00000436978 RPS6KB1P23443 525 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms