RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 KDRP35968 1356 aa17.78■□□□□ 0.44
NEDD4-202ENST00000435532 ROBO2Q9HCK4 1378 aa17.78■□□□□ 0.44
NEDD4-202ENST00000435532 SYCE3A1L190 88 aa17.78■□□□□ 0.44
NEDD4-202ENST00000435532 GIGYF1O75420 1035 aaPredicted RBP17.78■□□□□ 0.44
NEDD4-202ENST00000435532 PCCAP05165 728 aaPredicted RBP17.78■□□□□ 0.44
NEDD4-202ENST00000435532 A2ML1A8K2U0 1454 aa17.78■□□□□ 0.44
NEDD4-202ENST00000435532 BLMP54132 1417 aaPredicted RBP17.78■□□□□ 0.44
NEDD4-202ENST00000435532 NEURL1BA8MQ27 555 aa17.78■□□□□ 0.44
NEDD4-202ENST00000435532 TAF12Q16514 161 aa17.78■□□□□ 0.44
NEDD4-202ENST00000435532 AXDND1Q5T1B0 1012 aaPredicted RBP17.78■□□□□ 0.44
NEDD4-202ENST00000435532 RRAGBQ5VZM2 374 aa17.78■□□□□ 0.44
NEDD4-202ENST00000435532 ZBTB40Q9NUA8 1239 aa17.78■□□□□ 0.44
NEDD4-202ENST00000435532 NOP56O00567 594 aaKnown RBP17.77■□□□□ 0.44
NEDD4-202ENST00000435532 PER1O15534 1290 aaPredicted RBP17.77■□□□□ 0.44
NEDD4-202ENST00000435532 CAVIN2O95810 425 aa17.77■□□□□ 0.44
NEDD4-202ENST00000435532 ASIC1P78348 528 aa17.77■□□□□ 0.44
NEDD4-202ENST00000435532 ENOX2Q16206 610 aaKnown RBP17.77■□□□□ 0.44
NEDD4-202ENST00000435532 MFSD14BQ5SR56 506 aa17.77■□□□□ 0.44
NEDD4-202ENST00000435532 NECAB1Q8N987 351 aa17.77■□□□□ 0.44
NEDD4-202ENST00000435532 MAP3K4Q9Y6R4 1608 aa17.77■□□□□ 0.44
NEDD4-202ENST00000435532 PNMA2Q9UL42 364 aa17.77■□□□□ 0.44
NEDD4-202ENST00000435532 PCDHB15Q9Y5E8 787 aa17.77■□□□□ 0.44
NEDD4-202ENST00000435532 KIF2AO00139 706 aaPredicted RBP17.77■□□□□ 0.44
NEDD4-202ENST00000435532 KIF5CO60282 957 aa17.77■□□□□ 0.44
NEDD4-202ENST00000435532 ZSCAN22P10073 491 aaPredicted RBP17.77■□□□□ 0.44
NEDD4-202ENST00000435532 USP6P35125 1406 aa17.77■□□□□ 0.44
NEDD4-202ENST00000435532 IBTKQ9P2D0 1353 aaPredicted RBP17.77■□□□□ 0.43
NEDD4-202ENST00000435532 ARAP3Q8WWN8 1544 aa17.77■□□□□ 0.43
NEDD4-202ENST00000435532 CCDC112Q8NEF3 446 aa17.77■□□□□ 0.43
NEDD4-202ENST00000435532 DBNDD2Q9BQY9 259 aa17.77■□□□□ 0.43
NEDD4-202ENST00000435532 ABCC3O15438 1527 aa17.76■□□□□ 0.43
NEDD4-202ENST00000435532 BRINP3Q76B58 766 aa17.76■□□□□ 0.43
NEDD4-202ENST00000435532 TMX3Q96JJ7 454 aa17.76■□□□□ 0.43
NEDD4-202ENST00000435532 GRPEL1Q9HAV7 217 aa17.76■□□□□ 0.43
NEDD4-202ENST00000435532 SLC1A4P43007 532 aa17.76■□□□□ 0.43
NEDD4-202ENST00000435532 TCP10Q12799 353 aa17.76■□□□□ 0.43
NEDD4-202ENST00000435532 HS2ST1Q7LGA3 356 aa17.76■□□□□ 0.43
NEDD4-202ENST00000435532 ARPP21Q9UBL0 812 aaPredicted RBP17.76■□□□□ 0.43
NEDD4-202ENST00000435532 ALS2CR12Q96Q35 445 aa17.76■□□□□ 0.43
NEDD4-202ENST00000435532 ZBTB21Q9ULJ3 1066 aa17.76■□□□□ 0.43
NEDD4-202ENST00000435532 IFI16Q16666 785 aaKnown RBP17.76■□□□□ 0.43
NEDD4-202ENST00000435532 ZNF771Q7L3S4 317 aaPredicted RBP17.76■□□□□ 0.43
NEDD4-202ENST00000435532 PTPDC1A2A3K4 754 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 AFF2P51816 1311 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 ZYXQ15942 572 aaKnown RBP17.75■□□□□ 0.43
NEDD4-202ENST00000435532 DTHD1Q6ZMT9 781 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 PSMA7O14818 248 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 SERPINB2P05120 415 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 CTNNBL1Q8WYA6 563 aaPredicted RBP17.75■□□□□ 0.43
NEDD4-202ENST00000435532 TTC12Q9H892 705 aaPredicted RBP17.75■□□□□ 0.43
NEDD4-202ENST00000435532 MMRN2Q9H8L6 949 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 UBE2HP62256 183 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 SPAG1Q07617 926 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 CTAGE1Q96RT6 745 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 BRAPQ7Z569 592 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 HOOK3Q86VS8 718 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 MSANTD4Q8NCY6 345 aa17.75■□□□□ 0.43
NEDD4-202ENST00000435532 PPFIA3O75145 1194 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 SP4Q02446 784 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 PPP2R5BQ15173 497 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 CC2D2BQ6DHV5 1058 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 XDHP47989 1333 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 APOBRQ0VD83 1088 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 CHURC1Q8WUH1 139 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 TGFBRAP1Q8WUH2 860 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 M0QZ92 97 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 RUFY3Q7L099 469 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 GPAA1O43292 621 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 RBM6P78332 1123 aaKnown RBP17.74■□□□□ 0.43
NEDD4-202ENST00000435532 LEMD3Q9Y2U8 911 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 MAPKAPK5Q8IW41 473 aa17.74■□□□□ 0.43
NEDD4-202ENST00000435532 EIF3JO75822 258 aaKnown RBP17.73■□□□□ 0.43
NEDD4-202ENST00000435532 CERKQ8TCT0 537 aa17.73■□□□□ 0.43
NEDD4-202ENST00000435532 AZI2Q9H6S1 392 aa17.73■□□□□ 0.43
NEDD4-202ENST00000435532 PABPN1LA6NDY0 278 aaKnown RBP17.73■□□□□ 0.43
NEDD4-202ENST00000435532 AFMP43652 599 aa17.73■□□□□ 0.43
NEDD4-202ENST00000435532 DALRD3Q5D0E6 543 aaKnown RBP17.73■□□□□ 0.43
NEDD4-202ENST00000435532 MRPS27Q92552 414 aaKnown RBP17.73■□□□□ 0.43
NEDD4-202ENST00000435532 ZBTB7BO15156 539 aaPredicted RBP17.73■□□□□ 0.43
NEDD4-202ENST00000435532 TCEANC2Q96MN5 208 aa17.73■□□□□ 0.43
NEDD4-202ENST00000435532 SPATA31A3Q5VYP0 1347 aa17.73■□□□□ 0.43
NEDD4-202ENST00000435532 BIN1O00499 593 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 LPXNO60711 386 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 DEXIO95424 95 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 CHMLP26374 656 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 LRSAM1Q6UWE0 723 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 MCM7P33993 719 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 ZKSCAN3Q9BRR0 538 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 BICDL2A1A5D9 508 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 BBOX1O75936 387 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 HAUS3Q68CZ6 603 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 KBTBD3Q8NAB2 608 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 CDC42BPGQ6DT37 1551 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 SMTNP53814 917 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 FCHSD1Q86WN1 690 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 CDAN1Q8IWY9 1227 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 FAM212AQ96EL1 285 aa17.72■□□□□ 0.43
NEDD4-202ENST00000435532 TAOK3Q9H2K8 898 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms