RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 HPS5Q9UPZ3 1129 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 TIAM2Q8IVF5 1701 aa19.6■□□□□ 0.73
LIMK1-203ENST00000435201 NGLY1Q96IV0 654 aa19.59■□□□□ 0.73
LIMK1-203ENST00000435201 ANGEL1Q9UNK9 670 aaKnown RBP19.59■□□□□ 0.73
LIMK1-203ENST00000435201 FDPSP14324 419 aaKnown RBP19.58■□□□□ 0.73
LIMK1-203ENST00000435201 GNAT2P19087 354 aa19.58■□□□□ 0.73
LIMK1-203ENST00000435201 ADD1P35611 737 aaKnown RBP19.58■□□□□ 0.73
LIMK1-203ENST00000435201 BICD2Q8TD16 824 aa19.58■□□□□ 0.73
LIMK1-203ENST00000435201 PGBD1Q96JS3 809 aa19.58■□□□□ 0.73
LIMK1-203ENST00000435201 TMEM87BQ96K49 555 aa19.58■□□□□ 0.73
LIMK1-203ENST00000435201 C8orf37Q96NL8 207 aa19.58■□□□□ 0.73
LIMK1-203ENST00000435201 DACT1Q9NYF0 836 aa19.58■□□□□ 0.73
LIMK1-203ENST00000435201 NOL7Q9UMY1 257 aaKnown RBP19.58■□□□□ 0.73
LIMK1-203ENST00000435201 PNPLA7Q6ZV29 1317 aa19.58■□□□□ 0.72
LIMK1-203ENST00000435201 SNAP23O00161 211 aa19.58■□□□□ 0.72
LIMK1-203ENST00000435201 CPLX1O14810 134 aa19.58■□□□□ 0.72
LIMK1-203ENST00000435201 MBD4O95243 580 aa19.58■□□□□ 0.72
LIMK1-203ENST00000435201 BCAMP50895 628 aa19.58■□□□□ 0.72
LIMK1-203ENST00000435201 ERFEQ4G0M1 354 aa19.58■□□□□ 0.72
LIMK1-203ENST00000435201 ANKRD18AQ8IVF6 992 aa19.58■□□□□ 0.72
LIMK1-203ENST00000435201 TNMDQ9H2S6 317 aa19.58■□□□□ 0.72
LIMK1-203ENST00000435201 RCOR1Q9UKL0 485 aa19.58■□□□□ 0.72
LIMK1-203ENST00000435201 NHSQ6T4R5 1651 aa19.57■□□□□ 0.72
LIMK1-203ENST00000435201 SH2B2O14492 632 aaPredicted RBP19.57■□□□□ 0.72
LIMK1-203ENST00000435201 FOSBP53539 338 aa19.57■□□□□ 0.72
LIMK1-203ENST00000435201 RC3H1Q5TC82 1133 aaKnown RBP19.57■□□□□ 0.72
LIMK1-203ENST00000435201 IFNL3Q8IZI9 196 aa19.57■□□□□ 0.72
LIMK1-203ENST00000435201 NAPBQ9H115 298 aa19.57■□□□□ 0.72
LIMK1-203ENST00000435201 CLSTN2Q9H4D0 955 aa19.57■□□□□ 0.72
LIMK1-203ENST00000435201 RBM43Q6ZSC3 357 aaKnown RBP19.56■□□□□ 0.72
LIMK1-203ENST00000435201 GNL3LQ9NVN8 582 aaKnown RBP19.56■□□□□ 0.72
LIMK1-203ENST00000435201 BTAF1O14981 1849 aa19.56■□□□□ 0.72
LIMK1-203ENST00000435201 COL24A1Q17RW2 1714 aa19.56■□□□□ 0.72
LIMK1-203ENST00000435201 ZNF804BA4D1E1 1349 aa19.56■□□□□ 0.72
LIMK1-203ENST00000435201 UBE4AQ14139 1066 aa19.56■□□□□ 0.72
LIMK1-203ENST00000435201 SLC10A5Q5PT55 438 aa19.56■□□□□ 0.72
LIMK1-203ENST00000435201 CYB5R4Q7L1T6 521 aa19.56■□□□□ 0.72
LIMK1-203ENST00000435201 C8orf76Q96K31 380 aa19.56■□□□□ 0.72
LIMK1-203ENST00000435201 NACAP1Q9BZK3 213 aa19.56■□□□□ 0.72
LIMK1-203ENST00000435201 EPB41L4AQ9HCS5 686 aaPredicted RBP19.56■□□□□ 0.72
LIMK1-203ENST00000435201 BSDC1Q9NW68 430 aaPredicted RBP19.56■□□□□ 0.72
LIMK1-203ENST00000435201 COL4A1P02462 1669 aa19.56■□□□□ 0.72
LIMK1-203ENST00000435201 THSD7AQ9UPZ6 1657 aa19.56■□□□□ 0.72
LIMK1-203ENST00000435201 CDKL5O76039 1030 aa19.55■□□□□ 0.72
LIMK1-203ENST00000435201 FNBP4Q8N3X1 1017 aaPredicted RBP19.55■□□□□ 0.72
LIMK1-203ENST00000435201 NYXQ9GZU5 481 aa19.55■□□□□ 0.72
LIMK1-203ENST00000435201 CNNM2Q9H8M5 875 aa19.55■□□□□ 0.72
LIMK1-203ENST00000435201 ARMT1Q9H993 441 aa19.55■□□□□ 0.72
LIMK1-203ENST00000435201 ORC3Q9UBD5 711 aaPredicted RBP19.55■□□□□ 0.72
LIMK1-203ENST00000435201 LRP2BPQ9P2M1 347 aa19.54■□□□□ 0.72
LIMK1-203ENST00000435201 NARFQ9UHQ1 456 aa19.54■□□□□ 0.72
LIMK1-203ENST00000435201 NEDD4P46934 1319 aa19.54■□□□□ 0.72
LIMK1-203ENST00000435201 B4E1Z4 1266 aa19.54■□□□□ 0.72
LIMK1-203ENST00000435201 METAP2P50579 478 aaKnown RBP eCLIP19.54■□□□□ 0.72
LIMK1-203ENST00000435201 GUCY1B3Q02153 619 aa19.54■□□□□ 0.72
LIMK1-203ENST00000435201 CPLX2Q6PUV4 134 aaKnown RBP19.54■□□□□ 0.72
LIMK1-203ENST00000435201 FBXO18Q8NFZ0 1043 aa19.54■□□□□ 0.72
LIMK1-203ENST00000435201 USP28Q96RU2 1077 aa19.54■□□□□ 0.72
LIMK1-203ENST00000435201 KRT23Q9C075 422 aa19.54■□□□□ 0.72
LIMK1-203ENST00000435201 USP25Q9UHP3 1055 aa19.54■□□□□ 0.72
LIMK1-203ENST00000435201 ZKSCAN5Q9Y2L8 839 aa19.54■□□□□ 0.72
LIMK1-203ENST00000435201 GSG1L2A8MUP6 293 aa19.53■□□□□ 0.72
LIMK1-203ENST00000435201 UBAP1LF5GYI3 381 aa19.53■□□□□ 0.72
LIMK1-203ENST00000435201 KDM4AO75164 1064 aa19.53■□□□□ 0.72
LIMK1-203ENST00000435201 NR1I2O75469 434 aa19.53■□□□□ 0.72
LIMK1-203ENST00000435201 RPS6KA4O75676 772 aa19.53■□□□□ 0.72
LIMK1-203ENST00000435201 GTF2E1P29083 439 aaPredicted RBP19.53■□□□□ 0.72
LIMK1-203ENST00000435201 TYRO3Q06418 890 aa19.53■□□□□ 0.72
LIMK1-203ENST00000435201 CAMK4Q16566 473 aa19.53■□□□□ 0.72
LIMK1-203ENST00000435201 BRAPQ7Z569 592 aa19.53■□□□□ 0.72
LIMK1-203ENST00000435201 ILDR1Q86SU0 546 aaPredicted RBP19.53■□□□□ 0.72
LIMK1-203ENST00000435201 SGMS1Q86VZ5 419 aa19.53■□□□□ 0.72
LIMK1-203ENST00000435201 PTMAP06454 111 aaKnown RBP19.52■□□□□ 0.72
LIMK1-203ENST00000435201 CEBPZQ03701 1054 aaKnown RBP19.52■□□□□ 0.72
LIMK1-203ENST00000435201 TBC1D9BQ66K14 1250 aa19.52■□□□□ 0.72
LIMK1-203ENST00000435201 C3orf67Q6ZVT6 689 aa19.52■□□□□ 0.72
LIMK1-203ENST00000435201 FAM200AQ8TCP9 573 aa19.52■□□□□ 0.72
LIMK1-203ENST00000435201 DENND2AQ9ULE3 1009 aa19.52■□□□□ 0.72
LIMK1-203ENST00000435201 PPFIA3O75145 1194 aa19.52■□□□□ 0.71
LIMK1-203ENST00000435201 LIFRP42702 1097 aa19.52■□□□□ 0.71
LIMK1-203ENST00000435201 TDO2P48775 406 aa19.52■□□□□ 0.71
LIMK1-203ENST00000435201 AKNAD1Q5T1N1 836 aa19.52■□□□□ 0.71
LIMK1-203ENST00000435201 APOA5Q6Q788 366 aa19.52■□□□□ 0.71
LIMK1-203ENST00000435201 LCORLQ8N3X6 602 aa19.52■□□□□ 0.71
LIMK1-203ENST00000435201 IGDCC4Q8TDY8 1250 aa19.52■□□□□ 0.71
LIMK1-203ENST00000435201 BCL2L12Q9HB09 334 aa19.52■□□□□ 0.71
LIMK1-203ENST00000435201 SLC4A4Q9Y6R1 1079 aa19.52■□□□□ 0.71
LIMK1-203ENST00000435201 CTAGE5O15320 804 aa19.51■□□□□ 0.71
LIMK1-203ENST00000435201 ADCY5O95622 1261 aa19.51■□□□□ 0.71
LIMK1-203ENST00000435201 CAVIN4Q5BKX8 364 aa19.51■□□□□ 0.71
LIMK1-203ENST00000435201 MFSD6Q6ZSS7 791 aa19.51■□□□□ 0.71
LIMK1-203ENST00000435201 STAG1Q8WVM7 1258 aa19.51■□□□□ 0.71
LIMK1-203ENST00000435201 LY9Q9HBG7 655 aa19.51■□□□□ 0.71
LIMK1-203ENST00000435201 RTEL1Q9NZ71 1219 aa19.51■□□□□ 0.71
LIMK1-203ENST00000435201 MRVI1Q9Y6F6 885 aa19.51■□□□□ 0.71
LIMK1-203ENST00000435201 TAF1P21675 1872 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 ZBTB43O43298 467 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 ZNF500O60304 480 aaPredicted RBP19.5■□□□□ 0.71
LIMK1-203ENST00000435201 TMEM67Q5HYA8 995 aa19.5■□□□□ 0.71
LIMK1-203ENST00000435201 BICDL1Q6ZP65 573 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms