RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 CDHR2Q9BYE9 1310 aa14.2□□□□□ -0.14
CLDN4-203ENST00000435050 RPAP1Q9BWH6 1393 aaPredicted RBP14.2□□□□□ -0.14
CLDN4-203ENST00000435050 BCL9O00512 1426 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 C6orf229H3BNL8 230 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 CDKL5O76039 1030 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 CAMTA2O94983 1202 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 RPS8P62241 208 aaKnown RBP14.19□□□□□ -0.14
CLDN4-203ENST00000435050 CMTR1Q8N1G2 835 aaKnown RBP14.19□□□□□ -0.14
CLDN4-203ENST00000435050 SPATA31A5Q5VU36 1347 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 SPATA31A7Q8IWB4 1347 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 MARCKSP29966 332 aaPredicted RBP14.19□□□□□ -0.14
CLDN4-203ENST00000435050 USP5P45974 858 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 TBC1D9BQ66K14 1250 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 AMOTL1Q8IY63 956 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 LEO1Q8WVC0 666 aaPredicted RBP14.19□□□□□ -0.14
CLDN4-203ENST00000435050 ZNF830Q96NB3 372 aaPredicted RBP14.19□□□□□ -0.14
CLDN4-203ENST00000435050 ZSCAN16Q9H4T2 348 aaPredicted RBP14.19□□□□□ -0.14
CLDN4-203ENST00000435050 ISM2Q6H9L7 571 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 LINC00116Q8NCU8 138 aa14.19□□□□□ -0.14
CLDN4-203ENST00000435050 COL15A1P39059 1388 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 WTAPQ15007 396 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 CLEC17AQ6ZS10 378 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 FAM196AQ6ZSG2 479 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 CELF1Q92879 486 aaKnown RBP14.18□□□□□ -0.14
CLDN4-203ENST00000435050 PFKFB2O60825 505 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 PDIA4P13667 645 aaKnown RBP14.18□□□□□ -0.14
CLDN4-203ENST00000435050 IFNL3Q8IZI9 196 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 ERCC4Q92889 916 aaPredicted RBP14.18□□□□□ -0.14
CLDN4-203ENST00000435050 PLA2G12BQ9BX93 195 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 NYXQ9GZU5 481 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 DENND2AQ9ULE3 1009 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 ANGEL1Q9UNK9 670 aaKnown RBP14.18□□□□□ -0.14
CLDN4-203ENST00000435050 KDM3BQ7LBC6 1761 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 BIN1O00499 593 aa14.18□□□□□ -0.14
CLDN4-203ENST00000435050 NSUN7Q8NE18 718 aaKnown RBP14.18□□□□□ -0.14
CLDN4-203ENST00000435050 CREBRFQ8IUR6 639 aa14.17□□□□□ -0.14
CLDN4-203ENST00000435050 AATFQ9NY61 560 aaKnown RBP eCLIP14.17□□□□□ -0.14
CLDN4-203ENST00000435050 RASSF8Q8NHQ8 419 aa14.17□□□□□ -0.14
CLDN4-203ENST00000435050 CCDC39Q9UFE4 941 aa14.17□□□□□ -0.14
CLDN4-203ENST00000435050 ADCY5O95622 1261 aa14.17□□□□□ -0.14
CLDN4-203ENST00000435050 ST3GAL1Q11201 340 aa14.17□□□□□ -0.14
CLDN4-203ENST00000435050 LCORLQ8N3X6 602 aa14.17□□□□□ -0.14
CLDN4-203ENST00000435050 CNBD1Q8NA66 436 aa14.17□□□□□ -0.14
CLDN4-203ENST00000435050 ARID3AQ99856 593 aa14.17□□□□□ -0.14
CLDN4-203ENST00000435050 hCG_1642624A0A1W2PR95 340 aa14.16□□□□□ -0.14
CLDN4-203ENST00000435050 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
CLDN4-203ENST00000435050 ALS2Q96Q42 1657 aa14.16□□□□□ -0.14
CLDN4-203ENST00000435050 HIBADHP31937 336 aaKnown RBP14.16□□□□□ -0.14
CLDN4-203ENST00000435050 UBE3CQ15386 1083 aa14.16□□□□□ -0.14
CLDN4-203ENST00000435050 ZSCAN30Q86W11 494 aa14.16□□□□□ -0.14
CLDN4-203ENST00000435050 GPR101Q96P66 508 aaPredicted RBP14.16□□□□□ -0.14
CLDN4-203ENST00000435050 RNF41Q9H4P4 317 aaPredicted RBP14.16□□□□□ -0.14
CLDN4-203ENST00000435050 WTIPA6NIX2 430 aaPredicted RBP14.15□□□□□ -0.14
CLDN4-203ENST00000435050 GOLGA6L6A8MZA4 724 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 F8W031 263 aaPredicted RBP14.15□□□□□ -0.14
CLDN4-203ENST00000435050 DYNLL1P63167 89 aaKnown RBP14.15□□□□□ -0.14
CLDN4-203ENST00000435050 AIFM3Q96NN9 605 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 USP28Q96RU2 1077 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 STRCP1A6NGW2 1772 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 PATL2C9JE40 543 aaKnown RBP14.15□□□□□ -0.14
CLDN4-203ENST00000435050 IQCA1Q86XH1 822 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 TBC1D10CQ8IV04 446 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 CYP2D7A0A087X1C5 515 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 SLC3A2P08195 630 aaKnown RBP14.15□□□□□ -0.14
CLDN4-203ENST00000435050 ANO6Q4KMQ2 910 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 KRT23Q9C075 422 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
CLDN4-203ENST00000435050 DDX19AQ9NUU7 478 aaKnown RBP14.15□□□□□ -0.14
CLDN4-203ENST00000435050 A0A1B0GVL5 298 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 RTN1Q16799 776 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 DNAJC25Q9H1X3 360 aa14.15□□□□□ -0.14
CLDN4-203ENST00000435050 LLPHQ9BRT6 129 aaKnown RBP14.14□□□□□ -0.15
CLDN4-203ENST00000435050 MKNK2Q9HBH9 465 aa14.14□□□□□ -0.15
CLDN4-203ENST00000435050 R3HCC1Q9Y3T6 440 aaKnown RBP14.14□□□□□ -0.15
CLDN4-203ENST00000435050 PHRF1Q9P1Y6 1649 aaKnown RBP14.14□□□□□ -0.15
CLDN4-203ENST00000435050 TSPY2A6NKD2 308 aa14.14□□□□□ -0.15
CLDN4-203ENST00000435050 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.14□□□□□ -0.15
CLDN4-203ENST00000435050 LUZP1Q86V48 1076 aa14.14□□□□□ -0.15
CLDN4-203ENST00000435050 ESR2Q92731 530 aa14.14□□□□□ -0.15
CLDN4-203ENST00000435050 ZNF274Q96GC6 653 aaPredicted RBP14.14□□□□□ -0.15
CLDN4-203ENST00000435050 STRBPQ96SI9 672 aaKnown RBP14.14□□□□□ -0.15
CLDN4-203ENST00000435050 A0A087WWV3 80 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 NR1I2O75469 434 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 TRIM37O94972 964 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 NTSR2O95665 410 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 ZNF165P49910 485 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 TYRO3Q06418 890 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 MCM9Q9NXL9 1143 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 XBP1P17861 261 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 ATP2B2Q01814 1243 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 AKNAD1Q5T1N1 836 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 C3orf67Q6ZVT6 689 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 SEPT12Q8IYM1 358 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 CNNM2Q9H8M5 875 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 TSGA10IPQ3SY00 556 aa14.13□□□□□ -0.15
CLDN4-203ENST00000435050 ARHGEF1Q92888 912 aaKnown RBP14.13□□□□□ -0.15
CLDN4-203ENST00000435050 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
CLDN4-203ENST00000435050 KCNB2Q92953 911 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 CRNKL1Q9BZJ0 848 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms