RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 DHX40Q8IX18 779 aaKnown RBP29.04■■■□□ 2.24
LMBR1-209ENST00000434453 ERCC4Q92889 916 aaPredicted RBP29.04■■■□□ 2.24
LMBR1-209ENST00000434453 MAP7D2Q96T17 732 aa29.04■■■□□ 2.24
LMBR1-209ENST00000434453 CNNM1Q9NRU3 951 aa29.04■■■□□ 2.24
LMBR1-209ENST00000434453 ZBTB1Q9Y2K1 713 aa29.04■■■□□ 2.24
LMBR1-209ENST00000434453 DHX16O60231 1041 aaKnown RBP29.04■■■□□ 2.24
LMBR1-209ENST00000434453 CDC25BP30305 580 aa29.04■■■□□ 2.24
LMBR1-209ENST00000434453 MRPS27Q92552 414 aaKnown RBP29.04■■■□□ 2.24
LMBR1-209ENST00000434453 CLIP2Q9UDT6 1046 aa29.04■■■□□ 2.24
LMBR1-209ENST00000434453 NEDD4P46934 1319 aa29.03■■■□□ 2.24
LMBR1-209ENST00000434453 DISP2A7MBM2 1401 aa29.02■■■□□ 2.24
LMBR1-209ENST00000434453 A0A1W2PQ27 194 aa29.02■■■□□ 2.24
LMBR1-209ENST00000434453 A0A1W2PQ64 194 aa29.02■■■□□ 2.24
LMBR1-209ENST00000434453 A0A1W2PQD8 194 aa29.02■■■□□ 2.24
LMBR1-209ENST00000434453 KIF28PB7ZC32 967 aa29.02■■■□□ 2.24
LMBR1-209ENST00000434453 BTG4Q9NY30 223 aa29.02■■■□□ 2.24
LMBR1-209ENST00000434453 A0A1B0GVL5 298 aa29.02■■■□□ 2.24
LMBR1-209ENST00000434453 PDE8BO95263 885 aa29.02■■■□□ 2.24
LMBR1-209ENST00000434453 PHKA1P46020 1223 aa29.02■■■□□ 2.24
LMBR1-209ENST00000434453 CACTINQ8WUQ7 758 aaKnown RBP29.02■■■□□ 2.24
LMBR1-209ENST00000434453 POLR3EQ9NVU0 708 aa29.02■■■□□ 2.24
LMBR1-209ENST00000434453 NDUFA8P51970 172 aa29.01■■■□□ 2.24
LMBR1-209ENST00000434453 MYSM1Q5VVJ2 828 aa29.01■■■□□ 2.24
LMBR1-209ENST00000434453 CYB5R4Q7L1T6 521 aa29.01■■■□□ 2.24
LMBR1-209ENST00000434453 TRMT112Q9UI30 125 aaKnown RBP29.01■■■□□ 2.24
LMBR1-209ENST00000434453 SLIT2O94813 1529 aa29.01■■■□□ 2.23
LMBR1-209ENST00000434453 GOLGA6L19H0YKK7 550 aa29.01■■■□□ 2.23
LMBR1-209ENST00000434453 LRP5O75197 1615 aa29■■■□□ 2.23
LMBR1-209ENST00000434453 UBN2Q6ZU65 1347 aa29■■■□□ 2.23
LMBR1-209ENST00000434453 UBE3CQ15386 1083 aa29■■■□□ 2.23
LMBR1-209ENST00000434453 CCDC102BQ68D86 513 aa29■■■□□ 2.23
LMBR1-209ENST00000434453 ZNF710Q8N1W2 664 aa29■■■□□ 2.23
LMBR1-209ENST00000434453 ECM29Q5VYK3 1845 aa29■■■□□ 2.23
LMBR1-209ENST00000434453 TCRBV5S4A2TA0A5A2 114 aa29■■■□□ 2.23
LMBR1-209ENST00000434453 YEATS4O95619 227 aa29■■■□□ 2.23
LMBR1-209ENST00000434453 ARID4AP29374 1257 aaPredicted RBP29■■■□□ 2.23
LMBR1-209ENST00000434453 ANO10Q9NW15 660 aa29■■■□□ 2.23
LMBR1-209ENST00000434453 ZNF532Q9HCE3 1301 aa28.99■■■□□ 2.23
LMBR1-209ENST00000434453 ARAP2Q8WZ64 1704 aa28.99■■■□□ 2.23
LMBR1-209ENST00000434453 CPLX1O14810 134 aa28.99■■■□□ 2.23
LMBR1-209ENST00000434453 IDH1O75874 414 aaKnown RBP28.99■■■□□ 2.23
LMBR1-209ENST00000434453 KIF23Q02241 960 aaPredicted RBP28.99■■■□□ 2.23
LMBR1-209ENST00000434453 TTF1Q15361 905 aaPredicted RBP28.99■■■□□ 2.23
LMBR1-209ENST00000434453 BRAPQ7Z569 592 aa28.99■■■□□ 2.23
LMBR1-209ENST00000434453 MRFAP1L1Q96HT8 127 aa28.99■■■□□ 2.23
LMBR1-209ENST00000434453 WWC3Q9ULE0 1092 aa28.99■■■□□ 2.23
LMBR1-209ENST00000434453 STK38Q15208 465 aa28.98■■■□□ 2.23
LMBR1-209ENST00000434453 SENP2Q9HC62 589 aa28.98■■■□□ 2.23
LMBR1-209ENST00000434453 ANGEL1Q9UNK9 670 aaKnown RBP28.98■■■□□ 2.23
LMBR1-209ENST00000434453 PDE8AO60658 829 aa28.98■■■□□ 2.23
LMBR1-209ENST00000434453 PDE6AP16499 860 aa28.98■■■□□ 2.23
LMBR1-209ENST00000434453 KCNG4Q8TDN1 519 aa28.98■■■□□ 2.23
LMBR1-209ENST00000434453 AIFM3Q96NN9 605 aa28.97■■■□□ 2.23
LMBR1-209ENST00000434453 ZMYM6O95789 1325 aa28.97■■■□□ 2.23
LMBR1-209ENST00000434453 SH2B2O14492 632 aaPredicted RBP28.97■■■□□ 2.23
LMBR1-209ENST00000434453 SPTLC2O15270 562 aa28.97■■■□□ 2.23
LMBR1-209ENST00000434453 CHD4Q14839 1912 aa28.96■■■□□ 2.23
LMBR1-209ENST00000434453 FAM177BA6PVY3 158 aa28.96■■■□□ 2.23
LMBR1-209ENST00000434453 FGFR2P21802 821 aa28.96■■■□□ 2.23
LMBR1-209ENST00000434453 GLIPR1L2Q4G1C9 344 aa28.96■■■□□ 2.23
LMBR1-209ENST00000434453 TBC1D2BQ9UPU7 963 aa28.96■■■□□ 2.23
LMBR1-209ENST00000434453 DOCK2Q92608 1830 aa28.96■■■□□ 2.23
LMBR1-209ENST00000434453 AXDND1Q5T1B0 1012 aaPredicted RBP28.96■■■□□ 2.23
LMBR1-209ENST00000434453 MTERF4Q7Z6M4 381 aaKnown RBP28.96■■■□□ 2.23
LMBR1-209ENST00000434453 RIOK3O14730 519 aaKnown RBP28.95■■■□□ 2.22
LMBR1-209ENST00000434453 TRDNQ13061 729 aa28.95■■■□□ 2.22
LMBR1-209ENST00000434453 ARID5BQ14865 1188 aa28.95■■■□□ 2.22
LMBR1-209ENST00000434453 HELBQ8NG08 1087 aaPredicted RBP28.95■■■□□ 2.22
LMBR1-209ENST00000434453 SDF4Q9BRK5 362 aa28.95■■■□□ 2.22
LMBR1-209ENST00000434453 BECN2A8MW95 431 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 B4E1Z4 1266 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 SF3A1Q15459 793 aaKnown RBP28.94■■■□□ 2.22
LMBR1-209ENST00000434453 CEP57L1Q8IYX8 460 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 ZNF34Q8IZ26 560 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 STRBPQ96SI9 672 aaKnown RBP28.94■■■□□ 2.22
LMBR1-209ENST00000434453 ERVV-1B6SEH8 477 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 RXRAP19793 462 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 CDC27P30260 824 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 ANO1Q5XXA6 986 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 APOA5Q6Q788 366 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 AOPEPQ8N6M6 819 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 KIAA1468Q9P260 1216 aa28.94■■■□□ 2.22
LMBR1-209ENST00000434453 APPP05067 770 aa28.93■■■□□ 2.22
LMBR1-209ENST00000434453 DZIP3Q86Y13 1208 aaKnown RBP28.93■■■□□ 2.22
LMBR1-209ENST00000434453 PUM3Q15397 648 aaKnown RBP28.93■■■□□ 2.22
LMBR1-209ENST00000434453 LRRC8AQ8IWT6 810 aa28.93■■■□□ 2.22
LMBR1-209ENST00000434453 IGDCC4Q8TDY8 1250 aa28.93■■■□□ 2.22
LMBR1-209ENST00000434453 FBXW7Q969H0 707 aa28.93■■■□□ 2.22
LMBR1-209ENST00000434453 INCENPQ9NQS7 918 aa28.93■■■□□ 2.22
LMBR1-209ENST00000434453 METAP2P50579 478 aaKnown RBP eCLIP28.92■■■□□ 2.22
LMBR1-209ENST00000434453 DPCR1Q3MIW9 517 aa28.92■■■□□ 2.22
LMBR1-209ENST00000434453 RGS22Q8NE09 1264 aa28.92■■■□□ 2.22
LMBR1-209ENST00000434453 LPIN2Q92539 896 aa28.92■■■□□ 2.22
LMBR1-209ENST00000434453 UQCRFS1P1P0C7P4 283 aa28.92■■■□□ 2.22
LMBR1-209ENST00000434453 MROH7-TTC4A0A0A0MT08 1334 aa28.91■■■□□ 2.22
LMBR1-209ENST00000434453 SNAP23O00161 211 aa28.91■■■□□ 2.22
LMBR1-209ENST00000434453 WDHD1O75717 1129 aaPredicted RBP28.91■■■□□ 2.22
LMBR1-209ENST00000434453 IL6STP40189 918 aaPredicted RBP28.91■■■□□ 2.22
LMBR1-209ENST00000434453 SYNE3Q6ZMZ3 975 aa28.91■■■□□ 2.22
LMBR1-209ENST00000434453 EPB41L4AQ9HCS5 686 aaPredicted RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms