RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 MAST3O60307 1309 aa28.03■■■□□ 2.08
SMARCAL1-208ENST00000434435 RNF113AO15541 343 aaKnown RBP28.03■■■□□ 2.08
SMARCAL1-208ENST00000434435 PDE6AP16499 860 aa28.03■■■□□ 2.08
SMARCAL1-208ENST00000434435 ADD2P35612 726 aa28.03■■■□□ 2.08
SMARCAL1-208ENST00000434435 GRIK5Q16478 980 aa28.03■■■□□ 2.08
SMARCAL1-208ENST00000434435 SLC9C2Q5TAH2 1124 aa28.03■■■□□ 2.08
SMARCAL1-208ENST00000434435 TMED8Q6PL24 325 aaPredicted RBP28.03■■■□□ 2.08
SMARCAL1-208ENST00000434435 MAGEB6Q8N7X4 407 aa28.03■■■□□ 2.08
SMARCAL1-208ENST00000434435 ZNF541Q9H0D2 1346 aa28.02■■■□□ 2.08
SMARCAL1-208ENST00000434435 CHMLP26374 656 aa28.02■■■□□ 2.08
SMARCAL1-208ENST00000434435 NAA16Q6N069 864 aaPredicted RBP28.02■■■□□ 2.08
SMARCAL1-208ENST00000434435 ZC3H4Q9UPT8 1303 aaKnown RBP28.01■■■□□ 2.07
SMARCAL1-208ENST00000434435 GSTO1P78417 241 aa28.01■■■□□ 2.07
SMARCAL1-208ENST00000434435 MECOMQ03112 1051 aa28.01■■■□□ 2.07
SMARCAL1-208ENST00000434435 UBE3CQ15386 1083 aa28.01■■■□□ 2.07
SMARCAL1-208ENST00000434435 NSUN4Q96CB9 384 aaKnown RBP28.01■■■□□ 2.07
SMARCAL1-208ENST00000434435 AGBL3Q8NEM8 1001 aa28■■■□□ 2.07
SMARCAL1-208ENST00000434435 TTF2Q9UNY4 1162 aaKnown RBP28■■■□□ 2.07
SMARCAL1-208ENST00000434435 ECM29Q5VYK3 1845 aa27.99■■■□□ 2.07
SMARCAL1-208ENST00000434435 ZNF532Q9HCE3 1301 aa27.99■■■□□ 2.07
SMARCAL1-208ENST00000434435 F8W031 263 aaPredicted RBP27.99■■■□□ 2.07
SMARCAL1-208ENST00000434435 KIAA0825Q8IV33 1275 aa27.99■■■□□ 2.07
SMARCAL1-208ENST00000434435 SLF2Q8IX21 1173 aa27.99■■■□□ 2.07
SMARCAL1-208ENST00000434435 RUFY2Q8WXA3 655 aa27.99■■■□□ 2.07
SMARCAL1-208ENST00000434435 APPBP2Q92624 585 aa27.99■■■□□ 2.07
SMARCAL1-208ENST00000434435 GJA3Q9Y6H8 435 aa27.99■■■□□ 2.07
SMARCAL1-208ENST00000434435 TCRBV5S4A2TA0A5A2 114 aa27.98■■■□□ 2.07
SMARCAL1-208ENST00000434435 CYP7A1P22680 504 aa27.98■■■□□ 2.07
SMARCAL1-208ENST00000434435 NMIQ13287 307 aaPredicted RBP27.98■■■□□ 2.07
SMARCAL1-208ENST00000434435 ZMYM1Q5SVZ6 1142 aa27.98■■■□□ 2.07
SMARCAL1-208ENST00000434435 CDK5RAP2Q96SN8 1893 aa27.98■■■□□ 2.07
SMARCAL1-208ENST00000434435 CHGBP05060 677 aa27.97■■■□□ 2.07
SMARCAL1-208ENST00000434435 LDHCP07864 332 aa27.97■■■□□ 2.07
SMARCAL1-208ENST00000434435 RPS12P25398 132 aaKnown RBP27.97■■■□□ 2.07
SMARCAL1-208ENST00000434435 CWC27Q6UX04 472 aaKnown RBP27.97■■■□□ 2.07
SMARCAL1-208ENST00000434435 ZNF384Q8TF68 577 aa27.97■■■□□ 2.07
SMARCAL1-208ENST00000434435 GMLQ99445 158 aa27.97■■■□□ 2.07
SMARCAL1-208ENST00000434435 ZBTB12Q9Y330 459 aaPredicted RBP27.97■■■□□ 2.07
SMARCAL1-208ENST00000434435 RAD50Q92878 1312 aa27.96■■■□□ 2.07
SMARCAL1-208ENST00000434435 SLFNL1Q499Z3 407 aa27.96■■■□□ 2.07
SMARCAL1-208ENST00000434435 GPC2Q8N158 579 aa27.96■■■□□ 2.07
SMARCAL1-208ENST00000434435 FAM227BQ96M60 508 aa27.96■■■□□ 2.07
SMARCAL1-208ENST00000434435 HELLSQ9NRZ9 838 aa27.96■■■□□ 2.07
SMARCAL1-208ENST00000434435 MROH7-TTC4A0A0A0MT08 1334 aa27.95■■■□□ 2.07
SMARCAL1-208ENST00000434435 A0A0D9SFI3 127 aa27.95■■■□□ 2.06
SMARCAL1-208ENST00000434435 HDAC9Q9UKV0 1011 aa27.95■■■□□ 2.06
SMARCAL1-208ENST00000434435 SCNN1DP51172 638 aa27.94■■■□□ 2.06
SMARCAL1-208ENST00000434435 HDLBPQ00341 1268 aaKnown RBP27.94■■■□□ 2.06
SMARCAL1-208ENST00000434435 DIXDC1Q155Q3 683 aa27.94■■■□□ 2.06
SMARCAL1-208ENST00000434435 C8orf34Q49A92 452 aa27.94■■■□□ 2.06
SMARCAL1-208ENST00000434435 FOCADQ5VW36 1801 aa27.94■■■□□ 2.06
SMARCAL1-208ENST00000434435 GMPSP49915 693 aaPredicted RBP27.93■■■□□ 2.06
SMARCAL1-208ENST00000434435 MCMDC2Q4G0Z9 681 aa27.93■■■□□ 2.06
SMARCAL1-208ENST00000434435 OGFOD1Q8N543 542 aa27.93■■■□□ 2.06
SMARCAL1-208ENST00000434435 OSBP2Q969R2 916 aa27.93■■■□□ 2.06
SMARCAL1-208ENST00000434435 TEKT1Q969V4 418 aa27.93■■■□□ 2.06
SMARCAL1-208ENST00000434435 ESYT1Q9BSJ8 1104 aa27.93■■■□□ 2.06
SMARCAL1-208ENST00000434435 GAKO14976 1311 aa27.92■■■□□ 2.06
SMARCAL1-208ENST00000434435 USP17L8P0C7I0 530 aa27.92■■■□□ 2.06
SMARCAL1-208ENST00000434435 MMP14P50281 582 aa27.92■■■□□ 2.06
SMARCAL1-208ENST00000434435 ADGRA1Q86SQ6 560 aa27.92■■■□□ 2.06
SMARCAL1-208ENST00000434435 FAM163AQ96GL9 167 aaPredicted RBP27.92■■■□□ 2.06
SMARCAL1-208ENST00000434435 SEC62Q99442 399 aaKnown RBP27.92■■■□□ 2.06
SMARCAL1-208ENST00000434435 NOL10Q9BSC4 688 aaKnown RBP27.92■■■□□ 2.06
SMARCAL1-208ENST00000434435 MRIQ9BWK5 157 aa27.92■■■□□ 2.06
SMARCAL1-208ENST00000434435 SERPINA10Q9UK55 444 aa27.92■■■□□ 2.06
SMARCAL1-208ENST00000434435 CRKP46108 304 aa27.91■■■□□ 2.06
SMARCAL1-208ENST00000434435 HHIPL2Q6UWX4 724 aa27.91■■■□□ 2.06
SMARCAL1-208ENST00000434435 DPF2Q92785 391 aa27.91■■■□□ 2.06
SMARCAL1-208ENST00000434435 AIDAQ96BJ3 306 aa27.91■■■□□ 2.06
SMARCAL1-208ENST00000434435 PUS7LQ9H0K6 701 aaKnown RBP27.91■■■□□ 2.06
SMARCAL1-208ENST00000434435 DAGLAQ9Y4D2 1042 aa27.91■■■□□ 2.06
SMARCAL1-208ENST00000434435 M0R2C6 588 aa27.9■■■□□ 2.06
SMARCAL1-208ENST00000434435 SGSM2O43147 1006 aa27.9■■■□□ 2.06
SMARCAL1-208ENST00000434435 MFAP1P55081 439 aaKnown RBP27.9■■■□□ 2.06
SMARCAL1-208ENST00000434435 DPY19L2Q6NUT2 758 aa27.9■■■□□ 2.06
SMARCAL1-208ENST00000434435 MIGA1Q8NAN2 632 aa27.9■■■□□ 2.06
SMARCAL1-208ENST00000434435 SCN4AP35499 1836 aa27.9■■■□□ 2.06
SMARCAL1-208ENST00000434435 CCDC171Q6TFL3 1326 aa27.9■■■□□ 2.06
SMARCAL1-208ENST00000434435 NAV1Q8NEY1 1877 aa27.89■■■□□ 2.06
SMARCAL1-208ENST00000434435 MAGEB6P1A0A0J9YX57 407 aa27.89■■■□□ 2.06
SMARCAL1-208ENST00000434435 EIF5BO60841 1220 aaKnown RBP27.89■■■□□ 2.06
SMARCAL1-208ENST00000434435 CERS3Q8IU89 383 aa27.89■■■□□ 2.06
SMARCAL1-208ENST00000434435 UTRNP46939 3433 aa27.88■■■□□ 2.05
SMARCAL1-208ENST00000434435 GPAA1O43292 621 aa27.88■■■□□ 2.05
SMARCAL1-208ENST00000434435 DDNO94850 711 aaPredicted RBP27.88■■■□□ 2.05
SMARCAL1-208ENST00000434435 MBD4O95243 580 aa27.88■■■□□ 2.05
SMARCAL1-208ENST00000434435 BAG3O95817 575 aa27.88■■■□□ 2.05
SMARCAL1-208ENST00000434435 CCDC129Q6ZRS4 1044 aa27.88■■■□□ 2.05
SMARCAL1-208ENST00000434435 ZDHHC15Q96MV8 337 aa27.88■■■□□ 2.05
SMARCAL1-208ENST00000434435 WDR90Q96KV7 1748 aa27.87■■■□□ 2.05
SMARCAL1-208ENST00000434435 GPR75-ASB3A0A0A6YYF3 556 aa27.87■■■□□ 2.05
SMARCAL1-208ENST00000434435 BTDP43251 543 aa27.87■■■□□ 2.05
SMARCAL1-208ENST00000434435 RBM5P52756 815 aaKnown RBP eCLIP27.87■■■□□ 2.05
SMARCAL1-208ENST00000434435 CFAP100Q494V2 611 aa27.87■■■□□ 2.05
SMARCAL1-208ENST00000434435 ZNF589Q86UQ0 364 aaPredicted RBP27.87■■■□□ 2.05
SMARCAL1-208ENST00000434435 MICALL2Q8IY33 904 aa27.87■■■□□ 2.05
SMARCAL1-208ENST00000434435 IL25Q9H293 177 aa27.87■■■□□ 2.05
SMARCAL1-208ENST00000434435 AATFQ9NY61 560 aaKnown RBP eCLIP27.87■■■□□ 2.05
SMARCAL1-208ENST00000434435 BAZ2AQ9UIF9 1905 aaKnown RBP27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms