RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 MRPL42Q9Y6G3 142 aaKnown RBP10.33□□□□□ -0.76
PTPRK-212ENST00000434424 HMGXB3Q12766 1538 aa10.33□□□□□ -0.76
PTPRK-212ENST00000434424 SPDYE3A6NKU9 549 aa10.32□□□□□ -0.76
PTPRK-212ENST00000434424 F6X3S4 739 aa10.32□□□□□ -0.76
PTPRK-212ENST00000434424 HSD3B2P26439 372 aa10.32□□□□□ -0.76
PTPRK-212ENST00000434424 PRRT3Q5FWE3 981 aa10.32□□□□□ -0.76
PTPRK-212ENST00000434424 ZMYM1Q5SVZ6 1142 aa10.32□□□□□ -0.76
PTPRK-212ENST00000434424 C20orf204Q6ZNR8 217 aa10.32□□□□□ -0.76
PTPRK-212ENST00000434424 EAF1Q96JC9 268 aaPredicted RBP10.32□□□□□ -0.76
PTPRK-212ENST00000434424 GINM1Q9NU53 330 aa10.32□□□□□ -0.76
PTPRK-212ENST00000434424 SIRPGQ9P1W8 387 aa10.32□□□□□ -0.76
PTPRK-212ENST00000434424 BAZ1BQ9UIG0 1483 aaKnown RBP10.31□□□□□ -0.76
PTPRK-212ENST00000434424 ADH7P40394 386 aa10.31□□□□□ -0.76
PTPRK-212ENST00000434424 COL9A2Q14055 689 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-212ENST00000434424 PRPF40BQ6NWY9 871 aaKnown RBP10.31□□□□□ -0.76
PTPRK-212ENST00000434424 DTHD1Q6ZMT9 781 aa10.31□□□□□ -0.76
PTPRK-212ENST00000434424 ANKS3Q6ZW76 656 aa10.31□□□□□ -0.76
PTPRK-212ENST00000434424 SV2BQ7L1I2 683 aa10.31□□□□□ -0.76
PTPRK-212ENST00000434424 ANKRD24Q8TF21 1146 aa10.31□□□□□ -0.76
PTPRK-212ENST00000434424 TRIM56Q9BRZ2 755 aaKnown RBP10.31□□□□□ -0.76
PTPRK-212ENST00000434424 TRIM55Q9BYV6 548 aa10.31□□□□□ -0.76
PTPRK-212ENST00000434424 BRD7Q9NPI1 651 aa10.31□□□□□ -0.76
PTPRK-212ENST00000434424 LATS2Q9NRM7 1088 aa10.31□□□□□ -0.76
PTPRK-212ENST00000434424 AKAP2Q9Y2D5 859 aa10.31□□□□□ -0.76
PTPRK-212ENST00000434424 U2SURPO15042 1029 aaKnown RBP10.3□□□□□ -0.76
PTPRK-212ENST00000434424 ETFBP38117 255 aa10.3□□□□□ -0.76
PTPRK-212ENST00000434424 KCNQ4P56696 695 aa10.3□□□□□ -0.76
PTPRK-212ENST00000434424 NT5C1AQ9BXI3 368 aa10.3□□□□□ -0.76
PTPRK-212ENST00000434424 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
PTPRK-212ENST00000434424 MRVI1Q9Y6F6 885 aa10.3□□□□□ -0.76
PTPRK-212ENST00000434424 TMEM238LA0A1B0GVL6 79 aa10.29□□□□□ -0.76
PTPRK-212ENST00000434424 CYP2E1P05181 493 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-212ENST00000434424 GRIK4Q16099 956 aa10.29□□□□□ -0.76
PTPRK-212ENST00000434424 MAP3K11Q16584 847 aa10.29□□□□□ -0.76
PTPRK-212ENST00000434424 PEAR1Q5VY43 1037 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-212ENST00000434424 CPLX3Q8WVH0 158 aa10.29□□□□□ -0.76
PTPRK-212ENST00000434424 SRPK1Q96SB4 655 aaKnown RBP10.29□□□□□ -0.76
PTPRK-212ENST00000434424 SUPT16HQ9Y5B9 1047 aaKnown RBP10.29□□□□□ -0.76
PTPRK-212ENST00000434424 LAMC3Q9Y6N6 1575 aa10.28□□□□□ -0.76
PTPRK-212ENST00000434424 APBA3O96018 575 aa10.28□□□□□ -0.76
PTPRK-212ENST00000434424 SOX9P48436 509 aa10.28□□□□□ -0.76
PTPRK-212ENST00000434424 PSMG3-AS1Q96PY0 264 aa10.28□□□□□ -0.76
PTPRK-212ENST00000434424 LIN7BQ9HAP6 207 aa10.28□□□□□ -0.76
PTPRK-212ENST00000434424 ZFYVE1Q9HBF4 777 aa10.28□□□□□ -0.76
PTPRK-212ENST00000434424 R3HCC1Q9Y3T6 440 aaKnown RBP10.28□□□□□ -0.76
PTPRK-212ENST00000434424 DYRK3O43781 588 aa10.27□□□□□ -0.77
PTPRK-212ENST00000434424 SASH3O75995 380 aa10.27□□□□□ -0.77
PTPRK-212ENST00000434424 PTPROQ16827 1216 aa10.27□□□□□ -0.77
PTPRK-212ENST00000434424 FBXL19Q6PCT2 694 aa10.27□□□□□ -0.77
PTPRK-212ENST00000434424 ABCB6Q9NP58 842 aa10.27□□□□□ -0.77
PTPRK-212ENST00000434424 KCNQ5Q9NR82 932 aa10.27□□□□□ -0.77
PTPRK-212ENST00000434424 KCNH4Q9UQ05 1017 aa10.27□□□□□ -0.77
PTPRK-212ENST00000434424 THOC2Q8NI27 1593 aaKnown RBP10.26□□□□□ -0.77
PTPRK-212ENST00000434424 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-212ENST00000434424 FBXO24O75426 580 aa10.26□□□□□ -0.77
PTPRK-212ENST00000434424 IBSPP21815 317 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-212ENST00000434424 TRIM28Q13263 835 aaKnown RBP10.26□□□□□ -0.77
PTPRK-212ENST00000434424 RNF187Q5TA31 235 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-212ENST00000434424 PHC3Q8NDX5 983 aa10.26□□□□□ -0.77
PTPRK-212ENST00000434424 OR13H1Q8NG92 308 aa10.26□□□□□ -0.77
PTPRK-212ENST00000434424 RHOVQ96L33 236 aa10.26□□□□□ -0.77
PTPRK-212ENST00000434424 KRTAP9-2Q9BYQ4 174 aa10.26□□□□□ -0.77
PTPRK-212ENST00000434424 SALL4Q9UJQ4 1053 aa10.26□□□□□ -0.77
PTPRK-212ENST00000434424 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-212ENST00000434424 hCG_2014768A0A024R1R8 64 aa10.25□□□□□ -0.77
PTPRK-212ENST00000434424 LIG3P49916 1009 aa10.25□□□□□ -0.77
PTPRK-212ENST00000434424 IGBP1P78318 339 aa10.25□□□□□ -0.77
PTPRK-212ENST00000434424 FAM160A1Q05DH4 1040 aa10.25□□□□□ -0.77
PTPRK-212ENST00000434424 RAB33AQ14088 237 aa10.25□□□□□ -0.77
PTPRK-212ENST00000434424 TPTE2Q6XPS3 522 aa10.25□□□□□ -0.77
PTPRK-212ENST00000434424 KRT25Q7Z3Z0 450 aa10.25□□□□□ -0.77
PTPRK-212ENST00000434424 GPATCH3Q96I76 525 aa10.25□□□□□ -0.77
PTPRK-212ENST00000434424 CEP44Q9C0F1 390 aa10.25□□□□□ -0.77
PTPRK-212ENST00000434424 ENPP3O14638 875 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 KLF4O43474 513 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 GREM1O60565 184 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 PF4P02776 101 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 CCINQ13939 588 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 SNAP47Q5SQN1 464 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 HNRNPLLQ8WVV9 542 aaKnown RBP10.24□□□□□ -0.77
PTPRK-212ENST00000434424 KCNB2Q92953 911 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 ANAPC16Q96DE5 110 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 TCF12Q99081 682 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 UBP1Q9NZI7 540 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 TLR6Q9Y2C9 796 aa10.24□□□□□ -0.77
PTPRK-212ENST00000434424 MMP20O60882 483 aa10.23□□□□□ -0.77
PTPRK-212ENST00000434424 TARSP26639 723 aaKnown RBP10.23□□□□□ -0.77
PTPRK-212ENST00000434424 LMNB2Q03252 620 aa10.23□□□□□ -0.77
PTPRK-212ENST00000434424 NEUROD1Q13562 356 aa10.23□□□□□ -0.77
PTPRK-212ENST00000434424 BHMTQ93088 406 aa10.23□□□□□ -0.77
PTPRK-212ENST00000434424 NKD1Q969G9 470 aa10.23□□□□□ -0.77
PTPRK-212ENST00000434424 SRRTQ9BXP5 876 aaKnown RBP10.23□□□□□ -0.77
PTPRK-212ENST00000434424 SNTG2Q9NY99 539 aa10.23□□□□□ -0.77
PTPRK-212ENST00000434424 PRKAG3Q9UGI9 489 aa10.23□□□□□ -0.77
PTPRK-212ENST00000434424 RARAP10276 462 aa10.22□□□□□ -0.77
PTPRK-212ENST00000434424 SELPP16109 830 aa10.22□□□□□ -0.77
PTPRK-212ENST00000434424 GARTP22102 1010 aa10.22□□□□□ -0.77
PTPRK-212ENST00000434424 APOBRQ0VD83 1088 aa10.22□□□□□ -0.77
PTPRK-212ENST00000434424 CAMK2GQ13555 558 aaPredicted RBP10.22□□□□□ -0.77
PTPRK-212ENST00000434424 PCNX4Q63HM2 1172 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms