RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 LDLRAD1Q5T700 205 aa16.6■□□□□ 0.25
EDEM1-202ENST00000434243 DIEXFQ68CQ4 756 aaKnown RBP16.6■□□□□ 0.25
EDEM1-202ENST00000434243 ATG9AQ7Z3C6 839 aa16.6■□□□□ 0.25
EDEM1-202ENST00000434243 ARHGAP45Q92619 1136 aa16.6■□□□□ 0.25
EDEM1-202ENST00000434243 TBC1D8O95759 1140 aa16.59■□□□□ 0.25
EDEM1-202ENST00000434243 IREB2P48200 963 aaKnown RBP16.59■□□□□ 0.25
EDEM1-202ENST00000434243 TNNI2P48788 182 aa16.59■□□□□ 0.25
EDEM1-202ENST00000434243 HNRNPUQ00839 825 aaKnown RBP eCLIP16.59■□□□□ 0.25
EDEM1-202ENST00000434243 SREBF2Q12772 1141 aa16.59■□□□□ 0.25
EDEM1-202ENST00000434243 TEKT1Q969V4 418 aa16.59■□□□□ 0.25
EDEM1-202ENST00000434243 PA2G4Q9UQ80 394 aaKnown RBP16.59■□□□□ 0.25
EDEM1-202ENST00000434243 BCAR3O75815 825 aa16.58■□□□□ 0.24
EDEM1-202ENST00000434243 CIAO1O76071 339 aa16.58■□□□□ 0.24
EDEM1-202ENST00000434243 GNAI3P08754 354 aa16.58■□□□□ 0.24
EDEM1-202ENST00000434243 IL15P40933 162 aaPredicted RBP16.58■□□□□ 0.24
EDEM1-202ENST00000434243 TM4SF4P48230 202 aa16.58■□□□□ 0.24
EDEM1-202ENST00000434243 ATP2B3Q16720 1220 aa16.58■□□□□ 0.24
EDEM1-202ENST00000434243 SPRYD7Q5W111 196 aa16.58■□□□□ 0.24
EDEM1-202ENST00000434243 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
EDEM1-202ENST00000434243 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.24
EDEM1-202ENST00000434243 FBXO3Q9UK99 471 aa16.58■□□□□ 0.24
EDEM1-202ENST00000434243 MAST3O60307 1309 aa16.57■□□□□ 0.24
EDEM1-202ENST00000434243 HDLBPQ00341 1268 aaKnown RBP16.57■□□□□ 0.24
EDEM1-202ENST00000434243 MAP3K11Q16584 847 aa16.57■□□□□ 0.24
EDEM1-202ENST00000434243 WDR66Q8TBY9 1149 aa16.57■□□□□ 0.24
EDEM1-202ENST00000434243 CLUAP1Q96AJ1 413 aa16.57■□□□□ 0.24
EDEM1-202ENST00000434243 TMEM39BQ9GZU3 492 aa16.57■□□□□ 0.24
EDEM1-202ENST00000434243 GNL3LQ9NVN8 582 aaKnown RBP16.57■□□□□ 0.24
EDEM1-202ENST00000434243 TMOD2Q9NZR1 351 aa16.57■□□□□ 0.24
EDEM1-202ENST00000434243 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
EDEM1-202ENST00000434243 USP2O75604 605 aaPredicted RBP16.56■□□□□ 0.24
EDEM1-202ENST00000434243 CACNB3P54284 484 aa16.56■□□□□ 0.24
EDEM1-202ENST00000434243 MANSC4A6NHS7 340 aaPredicted RBP16.55■□□□□ 0.24
EDEM1-202ENST00000434243 TRIM27P14373 513 aa16.55■□□□□ 0.24
EDEM1-202ENST00000434243 ATF7IPQ6VMQ6 1270 aa16.55■□□□□ 0.24
EDEM1-202ENST00000434243 ANKRD13AQ8IZ07 590 aa16.55■□□□□ 0.24
EDEM1-202ENST00000434243 WNK4Q96J92 1243 aa16.55■□□□□ 0.24
EDEM1-202ENST00000434243 ZDHHC15Q96MV8 337 aa16.55■□□□□ 0.24
EDEM1-202ENST00000434243 COPRSQ9NQ92 184 aa16.55■□□□□ 0.24
EDEM1-202ENST00000434243 TNNQ9UQP3 1299 aa16.55■□□□□ 0.24
EDEM1-202ENST00000434243 SUGT1Q9Y2Z0 365 aa16.55■□□□□ 0.24
EDEM1-202ENST00000434243 SSC5DA1L4H1 1573 aa16.55■□□□□ 0.24
EDEM1-202ENST00000434243 UNCXA6NJT0 531 aa16.54■□□□□ 0.24
EDEM1-202ENST00000434243 CTU1Q7Z7A3 348 aaKnown RBP16.54■□□□□ 0.24
EDEM1-202ENST00000434243 CDAN1Q8IWY9 1227 aa16.54■□□□□ 0.24
EDEM1-202ENST00000434243 MRIQ9BWK5 157 aa16.54■□□□□ 0.24
EDEM1-202ENST00000434243 ELP3Q9H9T3 547 aa16.54■□□□□ 0.24
EDEM1-202ENST00000434243 CASP8AP2Q9UKL3 1982 aa16.53■□□□□ 0.24
EDEM1-202ENST00000434243 ZBTB48P10074 688 aaPredicted RBP16.53■□□□□ 0.24
EDEM1-202ENST00000434243 PHKA1P46020 1223 aa16.53■□□□□ 0.24
EDEM1-202ENST00000434243 INHBEP58166 350 aa16.53■□□□□ 0.24
EDEM1-202ENST00000434243 ZKSCAN2Q63HK3 967 aa16.53■□□□□ 0.24
EDEM1-202ENST00000434243 APOBEC3HQ6NTF7 200 aaKnown RBP16.53■□□□□ 0.24
EDEM1-202ENST00000434243 ZNF296Q8WUU4 475 aaPredicted RBP16.53■□□□□ 0.24
EDEM1-202ENST00000434243 TEPSINQ96N21 525 aa16.53■□□□□ 0.24
EDEM1-202ENST00000434243 DENND2AQ9ULE3 1009 aa16.53■□□□□ 0.24
EDEM1-202ENST00000434243 GPR25O00155 361 aa16.52■□□□□ 0.24
EDEM1-202ENST00000434243 ALDH1A1P00352 501 aa16.52■□□□□ 0.24
EDEM1-202ENST00000434243 GNAI2P04899 355 aa16.52■□□□□ 0.24
EDEM1-202ENST00000434243 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
EDEM1-202ENST00000434243 ADORA1P30542 326 aa16.52■□□□□ 0.24
EDEM1-202ENST00000434243 TIMM10P62072 90 aa16.52■□□□□ 0.24
EDEM1-202ENST00000434243 HHIPL2Q6UWX4 724 aa16.52■□□□□ 0.24
EDEM1-202ENST00000434243 PRDX5P30044 214 aa16.51■□□□□ 0.23
EDEM1-202ENST00000434243 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
EDEM1-202ENST00000434243 TFCP2Q12800 502 aa16.51■□□□□ 0.23
EDEM1-202ENST00000434243 DIXDC1Q155Q3 683 aa16.51■□□□□ 0.23
EDEM1-202ENST00000434243 CCDC102BQ68D86 513 aa16.51■□□□□ 0.23
EDEM1-202ENST00000434243 IFNL1Q8IU54 200 aa16.51■□□□□ 0.23
EDEM1-202ENST00000434243 OPTNQ96CV9 577 aa16.51■□□□□ 0.23
EDEM1-202ENST00000434243 NEUROD6Q96NK8 337 aa16.51■□□□□ 0.23
EDEM1-202ENST00000434243 AKAP2Q9Y2D5 859 aa16.51■□□□□ 0.23
EDEM1-202ENST00000434243 CSADQ9Y600 493 aa16.51■□□□□ 0.23
EDEM1-202ENST00000434243 GJA5P36382 358 aa16.5■□□□□ 0.23
EDEM1-202ENST00000434243 OTUD7BQ6GQQ9 843 aa16.5■□□□□ 0.23
EDEM1-202ENST00000434243 TMEM57Q8N5G2 664 aa16.5■□□□□ 0.23
EDEM1-202ENST00000434243 R3HDMLQ9H3Y0 253 aa16.5■□□□□ 0.23
EDEM1-202ENST00000434243 AKAP11Q9UKA4 1901 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 SEMA3EO15041 775 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 FKTNO75072 461 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 G3BP1Q13283 466 aaKnown RBP eCLIP16.49■□□□□ 0.23
EDEM1-202ENST00000434243 MTX1Q13505 466 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 VGLL4Q14135 290 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.49■□□□□ 0.23
EDEM1-202ENST00000434243 FAM83AQ86UY5 434 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 FTSJ3Q8IY81 847 aaKnown RBP16.49■□□□□ 0.23
EDEM1-202ENST00000434243 HOOK2Q96ED9 719 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 XAGE2Q96GT9 111 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 ABCF2Q9UG63 623 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 DAGLAQ9Y4D2 1042 aa16.49■□□□□ 0.23
EDEM1-202ENST00000434243 IGF2BP3O00425 579 aaKnown RBP eCLIP16.48■□□□□ 0.23
EDEM1-202ENST00000434243 TCP10Q12799 353 aa16.48■□□□□ 0.23
EDEM1-202ENST00000434243 GORABQ5T7V8 394 aa16.48■□□□□ 0.23
EDEM1-202ENST00000434243 FKBP1CQ5VVH2 108 aa16.48■□□□□ 0.23
EDEM1-202ENST00000434243 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
EDEM1-202ENST00000434243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.48■□□□□ 0.23
EDEM1-202ENST00000434243 CNKSR2Q8WXI2 1034 aa16.48■□□□□ 0.23
EDEM1-202ENST00000434243 WRNIP1Q96S55 665 aa16.48■□□□□ 0.23
EDEM1-202ENST00000434243 USP40Q9NVE5 1235 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms