RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 DNAJC5GQ8N7S2 189 aa23.29■■□□□ 1.32
RPUSD3-207ENST00000433555 RHPN1Q8TCX5 695 aa23.29■■□□□ 1.32
RPUSD3-207ENST00000433555 CCDC8Q9H0W5 538 aaPredicted RBP23.29■■□□□ 1.32
RPUSD3-207ENST00000433555 HMG20BQ9P0W2 317 aa23.29■■□□□ 1.32
RPUSD3-207ENST00000433555 CLRN2A0PK11 232 aa23.28■■□□□ 1.32
RPUSD3-207ENST00000433555 CELF2O95319 508 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-207ENST00000433555 MCAMP43121 646 aa23.28■■□□□ 1.32
RPUSD3-207ENST00000433555 SULF1Q8IWU6 871 aa23.28■■□□□ 1.32
RPUSD3-207ENST00000433555 ZNF408Q9H9D4 720 aa23.28■■□□□ 1.32
RPUSD3-207ENST00000433555 SERPINA10Q9UK55 444 aa23.28■■□□□ 1.32
RPUSD3-207ENST00000433555 THSD7BQ9C0I4 1608 aa23.28■■□□□ 1.32
RPUSD3-207ENST00000433555 PAPPA2Q9BXP8 1791 aa23.27■■□□□ 1.32
RPUSD3-207ENST00000433555 GORABQ5T7V8 394 aa23.27■■□□□ 1.32
RPUSD3-207ENST00000433555 CDCA5Q96FF9 252 aa23.27■■□□□ 1.32
RPUSD3-207ENST00000433555 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.32
RPUSD3-207ENST00000433555 SSC5DA1L4H1 1573 aa23.27■■□□□ 1.32
RPUSD3-207ENST00000433555 RBM5P52756 815 aaKnown RBP eCLIP23.26■■□□□ 1.31
RPUSD3-207ENST00000433555 DIXDC1Q155Q3 683 aa23.26■■□□□ 1.31
RPUSD3-207ENST00000433555 HSP90AB4PQ58FF6 505 aa23.26■■□□□ 1.31
RPUSD3-207ENST00000433555 AACSQ86V21 672 aa23.26■■□□□ 1.31
RPUSD3-207ENST00000433555 SUGT1Q9Y2Z0 365 aa23.26■■□□□ 1.31
RPUSD3-207ENST00000433555 PRAMEF18Q5VWM3 479 aa23.25■■□□□ 1.31
RPUSD3-207ENST00000433555 SPATA5Q8NB90 893 aa23.25■■□□□ 1.31
RPUSD3-207ENST00000433555 KIF1BPQ96EK5 621 aa23.25■■□□□ 1.31
RPUSD3-207ENST00000433555 MKRN1Q9UHC7 482 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-207ENST00000433555 OTOFQ9HC10 1997 aa23.25■■□□□ 1.31
RPUSD3-207ENST00000433555 CNTNAP1P78357 1384 aa23.25■■□□□ 1.31
RPUSD3-207ENST00000433555 SPDYE2Q495Y8 402 aa23.24■■□□□ 1.31
RPUSD3-207ENST00000433555 TTC39AQ5SRH9 613 aa23.24■■□□□ 1.31
RPUSD3-207ENST00000433555 APOBEC3FQ8IUX4 373 aaKnown RBP23.24■■□□□ 1.31
RPUSD3-207ENST00000433555 TEKT1Q969V4 418 aa23.24■■□□□ 1.31
RPUSD3-207ENST00000433555 KLRG1Q96E93 195 aa23.24■■□□□ 1.31
RPUSD3-207ENST00000433555 TDRD3Q9H7E2 651 aaKnown RBP23.24■■□□□ 1.31
RPUSD3-207ENST00000433555 MAST3O60307 1309 aa23.24■■□□□ 1.31
RPUSD3-207ENST00000433555 LDHBP07195 334 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-207ENST00000433555 UQCRFS1P1P0C7P4 283 aa23.23■■□□□ 1.31
RPUSD3-207ENST00000433555 HDLBPQ00341 1268 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-207ENST00000433555 TBC1D9Q6ZT07 1266 aa23.23■■□□□ 1.31
RPUSD3-207ENST00000433555 SNRKQ9NRH2 765 aa23.23■■□□□ 1.31
RPUSD3-207ENST00000433555 CDK5RAP2Q96SN8 1893 aa23.22■■□□□ 1.31
RPUSD3-207ENST00000433555 RAB11FIP3O75154 756 aa23.22■■□□□ 1.31
RPUSD3-207ENST00000433555 ZNF384Q8TF68 577 aa23.22■■□□□ 1.31
RPUSD3-207ENST00000433555 ZDHHC15Q96MV8 337 aa23.22■■□□□ 1.31
RPUSD3-207ENST00000433555 VEZTQ9HBM0 779 aa23.22■■□□□ 1.31
RPUSD3-207ENST00000433555 ZNF70Q9UC06 446 aaPredicted RBP23.22■■□□□ 1.31
RPUSD3-207ENST00000433555 ABCF2Q9UG63 623 aa23.22■■□□□ 1.31
RPUSD3-207ENST00000433555 ABT1Q9ULW3 272 aaKnown RBP23.22■■□□□ 1.31
RPUSD3-207ENST00000433555 DAGLAQ9Y4D2 1042 aa23.22■■□□□ 1.31
RPUSD3-207ENST00000433555 TLL2Q9Y6L7 1015 aa23.22■■□□□ 1.31
RPUSD3-207ENST00000433555 SMARCA5O60264 1052 aaPredicted RBP23.21■■□□□ 1.31
RPUSD3-207ENST00000433555 CCDC158Q5M9N0 1113 aa23.21■■□□□ 1.31
RPUSD3-207ENST00000433555 APOBEC3HQ6NTF7 200 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-207ENST00000433555 EXOC6Q8TAG9 804 aa23.21■■□□□ 1.31
RPUSD3-207ENST00000433555 RASSF10A6NK89 507 aa23.2■■□□□ 1.3
RPUSD3-207ENST00000433555 CACNB3P54284 484 aa23.2■■□□□ 1.3
RPUSD3-207ENST00000433555 HHIPL2Q6UWX4 724 aa23.2■■□□□ 1.3
RPUSD3-207ENST00000433555 ZNF512BQ96KM6 892 aaPredicted RBP23.2■■□□□ 1.3
RPUSD3-207ENST00000433555 BCL11AQ9H165 835 aa23.2■■□□□ 1.3
RPUSD3-207ENST00000433555 DCTPP1Q9H773 170 aa23.2■■□□□ 1.3
RPUSD3-207ENST00000433555 NDUFB9Q9Y6M9 179 aa23.2■■□□□ 1.3
RPUSD3-207ENST00000433555 MYO1BO43795 1136 aa23.19■■□□□ 1.3
RPUSD3-207ENST00000433555 ZAP70P43403 619 aa23.19■■□□□ 1.3
RPUSD3-207ENST00000433555 SAPCD2Q86UD0 394 aa23.19■■□□□ 1.3
RPUSD3-207ENST00000433555 CDAN1Q8IWY9 1227 aa23.19■■□□□ 1.3
RPUSD3-207ENST00000433555 CLASRPQ8N2M8 674 aaKnown RBP23.19■■□□□ 1.3
RPUSD3-207ENST00000433555 ZGPATQ8N5A5 531 aaKnown RBP23.19■■□□□ 1.3
RPUSD3-207ENST00000433555 GBA2Q9HCG7 927 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-207ENST00000433555 GAKO14976 1311 aa23.18■■□□□ 1.3
RPUSD3-207ENST00000433555 CYP2E1P05181 493 aaPredicted RBP23.18■■□□□ 1.3
RPUSD3-207ENST00000433555 MRIQ9BWK5 157 aa23.18■■□□□ 1.3
RPUSD3-207ENST00000433555 DEFB129Q9H1M3 183 aa23.18■■□□□ 1.3
RPUSD3-207ENST00000433555 PIH1D3Q9NQM4 214 aaKnown RBP23.18■■□□□ 1.3
RPUSD3-207ENST00000433555 FOCADQ5VW36 1801 aa23.17■■□□□ 1.3
RPUSD3-207ENST00000433555 RFX7Q2KHR2 1363 aa23.17■■□□□ 1.3
RPUSD3-207ENST00000433555 IRX6P78412 446 aaPredicted RBP23.17■■□□□ 1.3
RPUSD3-207ENST00000433555 MECOMQ03112 1051 aa23.17■■□□□ 1.3
RPUSD3-207ENST00000433555 MOB2Q70IA6 237 aa23.17■■□□□ 1.3
RPUSD3-207ENST00000433555 DZIP1Q86YF9 867 aaKnown RBP23.17■■□□□ 1.3
RPUSD3-207ENST00000433555 LRRCC1Q9C099 1032 aa23.17■■□□□ 1.3
RPUSD3-207ENST00000433555 MYH7P12883 1935 aa23.17■■□□□ 1.3
RPUSD3-207ENST00000433555 TCP10L2B9ZVM9 353 aa23.16■■□□□ 1.3
RPUSD3-207ENST00000433555 ERICH6Q7L0X2 663 aa23.16■■□□□ 1.3
RPUSD3-207ENST00000433555 FZD1Q9UP38 647 aa23.16■■□□□ 1.3
RPUSD3-207ENST00000433555 MROH7-TTC4A0A0A0MT08 1334 aa23.15■■□□□ 1.3
RPUSD3-207ENST00000433555 IFIT2P09913 472 aaKnown RBP23.15■■□□□ 1.3
RPUSD3-207ENST00000433555 VEGFBP49765 207 aa23.15■■□□□ 1.3
RPUSD3-207ENST00000433555 RASA3Q14644 834 aa23.15■■□□□ 1.3
RPUSD3-207ENST00000433555 NSUN4Q96CB9 384 aaKnown RBP23.15■■□□□ 1.3
RPUSD3-207ENST00000433555 DEFB115Q30KQ5 88 aa23.14■■□□□ 1.29
RPUSD3-207ENST00000433555 SPTY2D1Q68D10 685 aaPredicted RBP23.14■■□□□ 1.29
RPUSD3-207ENST00000433555 CYP4F22Q6NT55 531 aa23.14■■□□□ 1.29
RPUSD3-207ENST00000433555 CDC42EP5Q6NZY7 148 aa23.14■■□□□ 1.29
RPUSD3-207ENST00000433555 ANTXR1Q9H6X2 564 aa23.14■■□□□ 1.29
RPUSD3-207ENST00000433555 PPP2R3BQ9Y5P8 575 aa23.14■■□□□ 1.29
RPUSD3-207ENST00000433555 HUNKP57058 714 aa23.13■■□□□ 1.29
RPUSD3-207ENST00000433555 JMYQ8N9B5 988 aa23.13■■□□□ 1.29
RPUSD3-207ENST00000433555 TEPSINQ96N21 525 aa23.13■■□□□ 1.29
RPUSD3-207ENST00000433555 TMEM39BQ9GZU3 492 aa23.13■■□□□ 1.29
RPUSD3-207ENST00000433555 RAI14Q9P0K7 980 aa23.13■■□□□ 1.29
RPUSD3-207ENST00000433555 AK9Q5TCS8 1911 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms