RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PACS2Q86VP3 889 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 ATG3Q9NT62 314 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 JRKLQ9Y4A0 524 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 A0A0U1RQJ8 604 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 EIF3CLB5ME19 914 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 KIF28PB7ZC32 967 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 E2F4Q16254 413 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 TNNI3KQ59H18 835 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 ATRIPQ8WXE1 791 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 EIF3CQ99613 913 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 FPGT-TNNI3KV9GXZ4 949 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 NRKQ7Z2Y5 1582 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 USP31Q70CQ4 1352 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 GOLGA6L9A6NEM1 432 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 ATP5JP18859 108 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 NBPF6Q5VWK0 638 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 CNNM3Q8NE01 707 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 NBPF4Q96M43 638 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 PNKPQ96T60 521 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 ESF1Q9H501 851 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 MRPL44Q9H9J2 332 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 NEDD4P46934 1319 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 KLF18A0A0U1RQI7 1052 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 SOWAHDA6NJG2 315 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 GOLGA8BA8MQT2 603 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 YEATS4O95619 227 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 CMA1P23946 247 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 PIP4K2AP48426 406 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 BRD3Q15059 726 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 ZNF569Q5MCW4 686 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 TMEM139Q8IV31 216 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 A2ML1A8K2U0 1454 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 MROH7-TTC4A0A0A0MT08 1334 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 ERLIN1O75477 346 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 ZNF827Q17R98 1081 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 KIFC2Q96AC6 838 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 AIFM3Q96NN9 605 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 MYD88Q99836 296 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 POLR3EQ9NVU0 708 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 PCDHA5Q9Y5H7 936 aa13.25□□□□□ -0.29
HMGCS1-202ENST00000433297 FAM208AQ9UK61 1670 aaKnown RBP13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 FOXN1O15353 648 aa13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 EXOSC10Q01780 885 aaKnown RBP13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 PDE4BQ07343 736 aa13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 NEXNQ0ZGT2 675 aa13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 SRGAP1Q7Z6B7 1085 aa13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 PSD3Q9NYI0 1048 aa13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 C3P01024 1663 aa13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 BEND6Q5SZJ8 279 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 AXDND1Q5T1B0 1012 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 FCHSD1Q86WN1 690 aa13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 INTS13Q9NVM9 706 aa13.24□□□□□ -0.29
HMGCS1-202ENST00000433297 STX10O60499 249 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 CUTAO60888 179 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 RXRAP19793 462 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 CDC27P30260 824 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 CTR9Q6PD62 1173 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 TC2NQ8N9U0 490 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 ANKZF1Q9H8Y5 726 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 NFE2L3Q9Y4A8 694 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 MAP2K7O14733 419 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 KIF5CO60282 957 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 CCDC175P0C221 793 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 MAGEA9P43362 315 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 LONRF3Q496Y0 759 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 SPECC1LQ69YQ0 1117 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 RGS22Q8NE09 1264 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 ZNF274Q96GC6 653 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 GDAP1L1Q96MZ0 367 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 DEF6Q9H4E7 631 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 HSPD1P10809 573 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 TIMM10P62072 90 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 RABEP2Q9H5N1 569 aa13.23□□□□□ -0.29
HMGCS1-202ENST00000433297 IGKV5-2P06315 115 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 LRRC59Q96AG4 307 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 AKAP2Q9Y2D5 859 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 HOXB7P09629 217 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 CCDC102BQ68D86 513 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 SHC4Q6S5L8 630 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 FOXP4Q8IVH2 680 aaPredicted RBP13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 MICALL1Q8N3F8 863 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 FAM204AQ9H8W3 233 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 SALL1Q9NSC2 1324 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 MON2Q7Z3U7 1717 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 VSNL1P62760 191 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 CASP8Q14790 479 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 HSP90AB3PQ58FF7 597 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 KBTBD3Q8NAB2 608 aa13.22□□□□□ -0.29
HMGCS1-202ENST00000433297 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
HMGCS1-202ENST00000433297 ATP2B1P20020 1258 aa13.21□□□□□ -0.29
HMGCS1-202ENST00000433297 AKAP17AQ02040 695 aaKnown RBP13.21□□□□□ -0.29
HMGCS1-202ENST00000433297 WASHC4Q2M389 1173 aa13.21□□□□□ -0.29
HMGCS1-202ENST00000433297 KLHL10Q6JEL2 608 aa13.21□□□□□ -0.29
HMGCS1-202ENST00000433297 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-202ENST00000433297 UBE3BQ7Z3V4 1068 aa13.21□□□□□ -0.29
HMGCS1-202ENST00000433297 DNAJC5Q9H3Z4 198 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms